RNA–Protein interactions for RNA: YKL193C

SDS22, Transcript of Regulatory subunit of the type 1 protein phosphatase (PP1) Glc7p, yeastyeast

Gene SDS22, Length 1,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDS22YKL193C SEC2P17065 759 aa9.25□□□□□ -0.93
SDS22YKL193C REF2P42073 533 aaPredicted RBP9.25□□□□□ -0.93
SDS22YKL193C BRE2P43132 505 aa9.24□□□□□ -0.93
SDS22YKL193C YPR148CQ06523 435 aa9.24□□□□□ -0.93
SDS22YKL193C LAM6Q08001 693 aa9.23□□□□□ -0.93
SDS22YKL193C GCD11P32481 527 aaKnown RBP9.21□□□□□ -0.94
SDS22YKL193C NPL4P33755 580 aa9.2□□□□□ -0.94
SDS22YKL193C SPT16P32558 1035 aaKnown RBP9.16□□□□□ -0.94
SDS22YKL193C MVP1P40959 511 aaKnown RBP9.16□□□□□ -0.94
SDS22YKL193C FRK1Q03002 865 aaPredicted RBP9.14□□□□□ -0.95
SDS22YKL193C GAR1P28007 205 aaKnown RBP9.13□□□□□ -0.95
SDS22YKL193C GCR2Q01722 534 aa9.13□□□□□ -0.95
SDS22YKL193C RRN7P40992 514 aa9.12□□□□□ -0.95
SDS22YKL193C COX6P00427 148 aa9.11□□□□□ -0.95
SDS22YKL193C BDP1P46678 594 aa9.11□□□□□ -0.95
SDS22YKL193C CDC4P07834 779 aa9.1□□□□□ -0.95
SDS22YKL193C YPR109WQ06104 294 aa9.1□□□□□ -0.95
SDS22YKL193C RGR1P19263 1082 aa9.09□□□□□ -0.95
SDS22YKL193C VPS70P47161 811 aa9.08□□□□□ -0.96
SDS22YKL193C MAK21Q12176 1025 aaKnown RBP9.07□□□□□ -0.96
SDS22YKL193C ERF2Q06551 359 aa9.05□□□□□ -0.96
SDS22YKL193C GBP2P25555 427 aaKnown RBP RIP-Chip data9.03□□□□□ -0.96not detected
SDS22YKL193C MET22P32179 357 aa9.02□□□□□ -0.97
SDS22YKL193C KEX2P13134 814 aa9.01□□□□□ -0.97
SDS22YKL193C HED1Q03937 162 aa9.01□□□□□ -0.97
SDS22YKL193C PAT1P25644 796 aaKnown RBP8.99□□□□□ -0.97
SDS22YKL193C ENV9Q08651 330 aa8.97□□□□□ -0.97
SDS22YKL193C PAC1P39946 494 aaKnown RBP8.96□□□□□ -0.98
SDS22YKL193C MOD5P07884 428 aa8.94□□□□□ -0.98
SDS22YKL193C MET32Q12041 191 aa8.93□□□□□ -0.98
SDS22YKL193C AGE1Q04412 482 aa8.91□□□□□ -0.98
SDS22YKL193C ASH1P34233 588 aa8.9□□□□□ -0.98
SDS22YKL193C YDR444WQ04093 687 aa8.89□□□□□ -0.99
SDS22YKL193C PUS5Q06244 254 aa8.87□□□□□ -0.99
SDS22YKL193C TUB4P53378 473 aa8.86□□□□□ -0.99
SDS22YKL193C YDL176WQ12027 708 aa8.86□□□□□ -0.99
SDS22YKL193C AFT1P22149 690 aa8.85□□□□□ -0.99
SDS22YKL193C PSE1P32337 1089 aaKnown RBP8.84□□□□□ -0.99
SDS22YKL193C LCB5Q06147 687 aaKnown RBP8.84□□□□□ -0.99
SDS22YKL193C PBS2P08018 668 aa8.79□□□□□ -1
SDS22YKL193C HST3P53687 447 aa8.79□□□□□ -1
SDS22YKL193C RRD1P40454 393 aaKnown RBP8.77□□□□□ -1.01
SDS22YKL193C CLB5P30283 435 aa8.76□□□□□ -1.01
SDS22YKL193C YJR115WP47152 169 aa8.76□□□□□ -1.01
SDS22YKL193C RTF1P53064 558 aa8.76□□□□□ -1.01
SDS22YKL193C YNL115CP53925 644 aa8.75□□□□□ -1.01
SDS22YKL193C CKB1P43639 278 aa8.73□□□□□ -1.01
SDS22YKL193C SIT4P20604 311 aa8.72□□□□□ -1.01
SDS22YKL193C TPD3P31383 635 aa8.68□□□□□ -1.02
SDS22YKL193C MAM3Q12296 706 aa8.68□□□□□ -1.02
SDS22YKL193C NIS1P53939 407 aa8.66□□□□□ -1.02
SDS22YKL193C HXT10P43581 546 aa8.65□□□□□ -1.02
SDS22YKL193C KXD1P53158 218 aa8.65□□□□□ -1.02
SDS22YKL193C PDC1P06169 563 aaKnown RBP8.64□□□□□ -1.03
SDS22YKL193C IES2P40154 320 aa8.64□□□□□ -1.03
SDS22YKL193C MSB3P48566 633 aaPredicted RBP8.64□□□□□ -1.03
SDS22YKL193C TEA1P47988 759 aa8.62□□□□□ -1.03
SDS22YKL193C DSF2P38213 736 aa8.61□□□□□ -1.03
SDS22YKL193C NUP42P49686 430 aaKnown RBP8.61□□□□□ -1.03
SDS22YKL193C SYH1Q02875 849 aaKnown RBP8.61□□□□□ -1.03
SDS22YKL193C CAF120P53836 1060 aa8.59□□□□□ -1.03
SDS22YKL193C ACO2P39533 789 aa8.57□□□□□ -1.04
SDS22YKL193C PTK2P47116 818 aaKnown RBP8.56□□□□□ -1.04
SDS22YKL193C OPT2Q06593 877 aa8.56□□□□□ -1.04
SDS22YKL193C SLY41P22215 453 aa8.54□□□□□ -1.04
SDS22YKL193C FPK1P53739 893 aa8.54□□□□□ -1.04
SDS22YKL193C UGA3P26370 528 aa8.53□□□□□ -1.04
SDS22YKL193C DIT2P21595 489 aa8.52□□□□□ -1.05
SDS22YKL193C RPA14P50106 137 aa8.5□□□□□ -1.05
SDS22YKL193C YDL206WQ12424 762 aa8.5□□□□□ -1.05
SDS22YKL193C YPR097WQ06839 1073 aa8.49□□□□□ -1.05
SDS22YKL193C KIP2P28743 706 aa8.48□□□□□ -1.05
SDS22YKL193C MRT4P33201 236 aaKnown RBP8.48□□□□□ -1.05
SDS22YKL193C ALR1Q08269 859 aa8.48□□□□□ -1.05
SDS22YKL193C SRF1Q12516 437 aa8.47□□□□□ -1.05
SDS22YKL193C SCJ1P25303 377 aa8.46□□□□□ -1.06
SDS22YKL193C IXR1P33417 597 aa8.46□□□□□ -1.06
SDS22YKL193C PUS6P53294 404 aa8.46□□□□□ -1.06
SDS22YKL193C YMR196WQ04336 1088 aa8.46□□□□□ -1.06
SDS22YKL193C SAS10Q12136 610 aaPredicted RBP8.46□□□□□ -1.06
SDS22YKL193C GLY1P37303 387 aaKnown RBP8.45□□□□□ -1.06
SDS22YKL193C YLR346CQ06139 101 aa8.45□□□□□ -1.06
SDS22YKL193C YIR007WP40566 764 aa8.44□□□□□ -1.06
SDS22YKL193C NUP85P46673 744 aa8.44□□□□□ -1.06
SDS22YKL193C TRM1P15565 570 aaKnown RBP8.43□□□□□ -1.06
SDS22YKL193C TBF1Q02457 562 aa8.43□□□□□ -1.06
SDS22YKL193C TRK2P28584 889 aa8.42□□□□□ -1.06
SDS22YKL193C MTC5Q03897 1148 aa8.42□□□□□ -1.06
SDS22YKL193C TYW1Q08960 810 aaKnown RBP8.41□□□□□ -1.06
SDS22YKL193C YGR035CP53222 116 aa8.4□□□□□ -1.06
SDS22YKL193C TY1A-BLQ12266 440 aa8.4□□□□□ -1.06
SDS22YKL193C BUB1P41695 1021 aaKnown RBP RIP-Chip data8.39□□□□□ -1.07not detected
SDS22YKL193C HST2P53686 357 aa8.39□□□□□ -1.07
SDS22YKL193C HPF1Q05164 967 aa8.39□□□□□ -1.07
SDS22YKL193C SCW11P53189 542 aa8.38□□□□□ -1.07
SDS22YKL193C MIP1P15801 1254 aa8.37□□□□□ -1.07
SDS22YKL193C SPB4P25808 606 aaPredicted RBP8.35□□□□□ -1.07
SDS22YKL193C RTT106P40161 455 aa8.34□□□□□ -1.07
SDS22YKL193C VAC17P25591 423 aa8.32□□□□□ -1.08
SDS22YKL193C MMP1Q12372 583 aa8.32□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms