Protein–RNA interactions for Protein: P42073

REF2, RNA end formation protein 2, yeastyeast

Predicted RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
REF2P42073 YML009W-BYML009W-B 477 nt20.62■□□□□ 0.89
REF2P42073 NSR1YGR159C 1245 nt20.41■□□□□ 0.86
REF2P42073 NOP1YDL014W 984 nt20.13■□□□□ 0.81
REF2P42073 YKL036CYKL036C 393 nt18.75■□□□□ 0.59
REF2P42073 MDJ1YFL016C 1536 nt17.92■□□□□ 0.46
REF2P42073 Q0297Q0297 156 nt17.76■□□□□ 0.43
REF2P42073 SRX1YKL086W 384 nt17.64■□□□□ 0.41
REF2P42073 YJL027CYJL027C 417 nt17.5■□□□□ 0.39
REF2P42073 SCS3YGL126W 1143 nt17.18■□□□□ 0.34
REF2P42073 Q0182Q0182 405 nt17.04■□□□□ 0.32
REF2P42073 MOT3YMR070W 1473 nt16.9■□□□□ 0.3
REF2P42073 YCR051WYCR051W 669 nt16.65■□□□□ 0.26
REF2P42073 YOL085CYOL085C 342 nt16.26■□□□□ 0.19
REF2P42073 DBP2YNL112W 1641 nt16.01■□□□□ 0.15
REF2P42073 PKP1YIL042C 1185 nt15.93■□□□□ 0.14
REF2P42073 RPP1BYDL130W 321 nt15.9■□□□□ 0.14
REF2P42073 YGR139WYGR139W 339 nt15.89■□□□□ 0.13
REF2P42073 TRN1tP(UGG)A 72 nt15.87■□□□□ 0.13
REF2P42073 SUF9tP(UGG)F 72 nt15.87■□□□□ 0.13
REF2P42073 SUF8tP(UGG)H 72 nt15.87■□□□□ 0.13
REF2P42073 tP(UGG)LtP(UGG)L 72 nt15.87■□□□□ 0.13
REF2P42073 SUF7tP(UGG)M 72 nt15.87■□□□□ 0.13
REF2P42073 tP(UGG)N1tP(UGG)N1 72 nt15.87■□□□□ 0.13
REF2P42073 tP(UGG)N2tP(UGG)N2 72 nt15.87■□□□□ 0.13
REF2P42073 tP(UGG)O1tP(UGG)O1 72 nt15.87■□□□□ 0.13
REF2P42073 SUF11tP(UGG)O2 72 nt15.87■□□□□ 0.13
REF2P42073 CCC1YLR220W 969 nt15.59■□□□□ 0.09
REF2P42073 SCJ1YMR214W 1134 nt15.47■□□□□ 0.07
REF2P42073 NME1NME1 340 nt15.47■□□□□ 0.07
REF2P42073 ATS1YAL020C 1002 nt15.41■□□□□ 0.06
REF2P42073 YBR190WYBR190W 312 nt15.27■□□□□ 0.04
REF2P42073 PET122YER153C 765 nt15.16■□□□□ 0.02
REF2P42073 tP(UGG)O3tP(UGG)O3 72 nt15.03■□□□□ -0
REF2P42073 SCR1SCR1 522 nt14.99□□□□□ -0.01
REF2P42073 RVS167YDR388W 1449 nt14.98□□□□□ -0.01
REF2P42073 RTC3YHR087W 336 nt14.83□□□□□ -0.04
REF2P42073 RRN5YLR141W 1092 nt14.73□□□□□ -0.05
REF2P42073 YDJ1YNL064C 1230 nt14.58□□□□□ -0.08
REF2P42073 CSM2YIL132C 642 nt14.55□□□□□ -0.08
REF2P42073 SHR5YOL110W 714 nt14.55□□□□□ -0.08
REF2P42073 YER088W-BYER088W-B 147 nt14.46□□□□□ -0.09
REF2P42073 RSB1YOR049C 1065 nt14.43□□□□□ -0.1
REF2P42073 PST2YDR032C 597 nt14.28□□□□□ -0.12
REF2P42073 SSA3YBL075C 1950 nt14.26□□□□□ -0.13
REF2P42073 PAU21YOR394W 495 nt14.2□□□□□ -0.14
REF2P42073 PAU22YPL282C 495 nt14.2□□□□□ -0.14
REF2P42073 GAR1YHR089C 618 nt14.14□□□□□ -0.15
REF2P42073 ARO7YPR060C 771 nt14.05□□□□□ -0.16
REF2P42073 URN1YPR152C 1398 nt14.01□□□□□ -0.17
REF2P42073 DEP1YAL013W 1218 nt14.01□□□□□ -0.17
REF2P42073 YNL208WYNL208W 600 nt13.86□□□□□ -0.19
REF2P42073 RPN10YHR200W 807 nt13.82□□□□□ -0.2
REF2P42073 OPI9YLR338W 858 nt13.82□□□□□ -0.2
REF2P42073 PUT4YOR348C 1884 nt13.77□□□□□ -0.21
REF2P42073 YKL097CYKL097C 411 nt13.74□□□□□ -0.21
REF2P42073 TIR1YER011W 765 nt13.7□□□□□ -0.22
REF2P42073 SAH1YER043C 1350 nt13.65□□□□□ -0.22
REF2P42073 SHU1YHL006C 453 nt13.64□□□□□ -0.23
REF2P42073 REG2YBR050C 1017 nt13.63□□□□□ -0.23
REF2P42073 PAM17YKR065C 594 nt13.57□□□□□ -0.24
REF2P42073 ARE1YCR048W 1833 nt13.57□□□□□ -0.24
REF2P42073 SSA1YAL005C 1929 nt13.53□□□□□ -0.24
REF2P42073 MET8YBR213W 825 nt13.44□□□□□ -0.26
REF2P42073 PUN1YLR414C 792 nt13.4□□□□□ -0.26
REF2P42073 YJR018WYJR018W 363 nt13.39□□□□□ -0.27
REF2P42073 SRB2YHR041C 633 nt13.37□□□□□ -0.27
REF2P42073 YHR049C-AYHR049C-A 297 nt13.33□□□□□ -0.28
REF2P42073 YJR120WYJR120W 351 nt13.32□□□□□ -0.28
REF2P42073 YAL037C-BYAL037C-B 975 nt13.31□□□□□ -0.28
REF2P42073 CLB6YGR109C 1143 nt13.29□□□□□ -0.28
REF2P42073 POA1YBR022W 534 nt13.27□□□□□ -0.29
REF2P42073 YOR139CYOR139C 393 nt13.23□□□□□ -0.29
REF2P42073 YEL009C-AYEL009C-A 408 nt13.2□□□□□ -0.3
REF2P42073 PTC2YER089C 1395 nt13.18□□□□□ -0.3
REF2P42073 BUR6YER159C 429 nt13.16□□□□□ -0.3
REF2P42073 ARA2YMR041C 1008 nt13.14□□□□□ -0.31
REF2P42073 RPP2BYDR382W 333 nt13.12□□□□□ -0.31
REF2P42073 WWM1YFL010C 636 nt13.12□□□□□ -0.31
REF2P42073 Q0010Q0010 387 nt13.12□□□□□ -0.31
REF2P42073 YGR021WYGR021W 873 nt13.11□□□□□ -0.31
REF2P42073 HOM6YJR139C 1080 nt13.11□□□□□ -0.31
REF2P42073 MNP1YGL068W 585 nt13.03□□□□□ -0.32
REF2P42073 YLR122CYLR122C 378 nt13.02□□□□□ -0.33
REF2P42073 NAB2YGL122C 1578 nt13□□□□□ -0.33
REF2P42073 NPL3YDR432W 1245 nt12.99□□□□□ -0.33
REF2P42073 BMT5YIL096C 1011 nt12.99□□□□□ -0.33
REF2P42073 BSC6YOL137W 1494 nt12.98□□□□□ -0.33
REF2P42073 BUD23YCR047C 828 nt12.98□□□□□ -0.33
REF2P42073 BDH2YAL061W 1254 nt12.95□□□□□ -0.34
REF2P42073 YFL021C-AYFL021C-A 855 nt12.93□□□□□ -0.34
REF2P42073 FIS1YIL065C 468 nt12.9□□□□□ -0.34
REF2P42073 YOL037CYOL037C 354 nt12.9□□□□□ -0.34
REF2P42073 INM2YDR287W 879 nt12.89□□□□□ -0.35
REF2P42073 RKM5YLR137W 1104 nt12.89□□□□□ -0.35
REF2P42073 DAL1YIR027C 1383 nt12.87□□□□□ -0.35
REF2P42073 YIR018C-AYIR018C-A 138 nt12.85□□□□□ -0.35
REF2P42073 SRN2YLR119W 642 nt12.85□□□□□ -0.35
REF2P42073 ABZ2YMR289W 1125 nt12.85□□□□□ -0.35
REF2P42073 LSM3YLR438C-A 270 nt12.84□□□□□ -0.35
REF2P42073 SPT5YML010W 3192 nt12.83□□□□□ -0.36
Retrieved 100 of 7,029 protein–RNA pairs in 16.5 ms