RNA–Protein interactions for RNA: YGL070C

RPB9, Transcript of RNA polymerase II subunit B12.6, yeastyeast

Gene RPB9, Length 369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB9YGL070C TY1A-MR2P0CX69 440 aa5.71□□□□□ -1.5
RPB9YGL070C GAR1P28007 205 aaKnown RBP5.71□□□□□ -1.5
RPB9YGL070C TY1A-JR2P47099 440 aa5.71□□□□□ -1.5
RPB9YGL070C TY1A-DR1Q03856 440 aa5.71□□□□□ -1.5
RPB9YGL070C TY1A-ML1Q04706 440 aaKnown RBP5.71□□□□□ -1.5
RPB9YGL070C TY1A-BRQ12217 440 aa5.71□□□□□ -1.5
RPB9YGL070C TY1A-NL2Q12470 440 aa5.71□□□□□ -1.5
RPB9YGL070C TY1A-GR2Q12485 440 aa5.71□□□□□ -1.5
RPB9YGL070C DNA2P38859 1522 aa5.7□□□□□ -1.5
RPB9YGL070C ORC6P38826 435 aa5.7□□□□□ -1.5
RPB9YGL070C SEC2P17065 759 aa5.69□□□□□ -1.5
RPB9YGL070C GCD11P32481 527 aaKnown RBP5.69□□□□□ -1.5
RPB9YGL070C SPT16P32558 1035 aaKnown RBP5.69□□□□□ -1.5
RPB9YGL070C GBP2P25555 427 aaKnown RBP RIP-Chip data5.68□□□□□ -1.5not detected
RPB9YGL070C REF2P42073 533 aaPredicted RBP5.68□□□□□ -1.5
RPB9YGL070C FRK1Q03002 865 aaPredicted RBP5.68□□□□□ -1.5
RPB9YGL070C DMA1P38823 416 aa5.66□□□□□ -1.5
RPB9YGL070C CDC4P07834 779 aa5.65□□□□□ -1.5
RPB9YGL070C RRN7P40992 514 aa5.65□□□□□ -1.5
RPB9YGL070C BDP1P46678 594 aa5.65□□□□□ -1.5
RPB9YGL070C YPR148CQ06523 435 aa5.65□□□□□ -1.5
RPB9YGL070C MVP1P40959 511 aaKnown RBP5.62□□□□□ -1.51
RPB9YGL070C SWR1Q05471 1514 aa5.61□□□□□ -1.51
RPB9YGL070C PAT1P25644 796 aaKnown RBP5.6□□□□□ -1.51
RPB9YGL070C MET22P32179 357 aa5.6□□□□□ -1.51
RPB9YGL070C YPR109WQ06104 294 aa5.6□□□□□ -1.51
RPB9YGL070C HED1Q03937 162 aa5.59□□□□□ -1.51
RPB9YGL070C ENV9Q08651 330 aa5.59□□□□□ -1.51
RPB9YGL070C MAK21Q12176 1025 aaKnown RBP5.59□□□□□ -1.51
RPB9YGL070C COX6P00427 148 aa5.58□□□□□ -1.52
RPB9YGL070C RGR1P19263 1082 aa5.57□□□□□ -1.52
RPB9YGL070C KEX2P13134 814 aa5.56□□□□□ -1.52
RPB9YGL070C VPS70P47161 811 aa5.56□□□□□ -1.52
RPB9YGL070C KOG1P38873 1557 aa5.55□□□□□ -1.52
RPB9YGL070C YDR444WQ04093 687 aa5.55□□□□□ -1.52
RPB9YGL070C ERF2Q06551 359 aa5.55□□□□□ -1.52
RPB9YGL070C PAC1P39946 494 aaKnown RBP5.52□□□□□ -1.53
RPB9YGL070C MET32Q12041 191 aa5.52□□□□□ -1.53
RPB9YGL070C ASH1P34233 588 aa5.5□□□□□ -1.53
RPB9YGL070C LEO1P38439 464 aa5.5□□□□□ -1.53
RPB9YGL070C LCB5Q06147 687 aaKnown RBP5.5□□□□□ -1.53
RPB9YGL070C MOD5P07884 428 aa5.49□□□□□ -1.53
RPB9YGL070C AFT1P22149 690 aa5.49□□□□□ -1.53
RPB9YGL070C TY1B-DR4Q07793 1604 aa5.48□□□□□ -1.53
RPB9YGL070C HST3P53687 447 aa5.48□□□□□ -1.53
RPB9YGL070C PUS5Q06244 254 aa5.48□□□□□ -1.53
RPB9YGL070C YDL176WQ12027 708 aa5.48□□□□□ -1.53
RPB9YGL070C AGE1Q04412 482 aa5.47□□□□□ -1.53
RPB9YGL070C TUB4P53378 473 aa5.46□□□□□ -1.54
RPB9YGL070C PSE1P32337 1089 aaKnown RBP5.43□□□□□ -1.54
RPB9YGL070C RRD1P40454 393 aaKnown RBP5.43□□□□□ -1.54
RPB9YGL070C CLB5P30283 435 aa5.42□□□□□ -1.54
RPB9YGL070C YJR115WP47152 169 aa5.42□□□□□ -1.54
RPB9YGL070C RTF1P53064 558 aa5.41□□□□□ -1.54
RPB9YGL070C PBS2P08018 668 aa5.39□□□□□ -1.55
RPB9YGL070C YNL115CP53925 644 aa5.38□□□□□ -1.55
RPB9YGL070C MSB3P48566 633 aaPredicted RBP5.37□□□□□ -1.55
RPB9YGL070C KXD1P53158 218 aa5.36□□□□□ -1.55
RPB9YGL070C TPD3P31383 635 aa5.35□□□□□ -1.55
RPB9YGL070C CAF120P53836 1060 aa5.35□□□□□ -1.55
RPB9YGL070C TCB3Q03640 1545 aaKnown RBP5.34□□□□□ -1.55
RPB9YGL070C CKB1P43639 278 aa5.34□□□□□ -1.55
RPB9YGL070C SYH1Q02875 849 aaKnown RBP5.34□□□□□ -1.55
RPB9YGL070C SIT4P20604 311 aa5.33□□□□□ -1.56
RPB9YGL070C HXT10P43581 546 aa5.33□□□□□ -1.56
RPB9YGL070C MAM3Q12296 706 aa5.33□□□□□ -1.56
RPB9YGL070C PDC1P06169 563 aaKnown RBP5.32□□□□□ -1.56
RPB9YGL070C UGA3P26370 528 aa5.31□□□□□ -1.56
RPB9YGL070C ACO2P39533 789 aa5.31□□□□□ -1.56
RPB9YGL070C PTK2P47116 818 aaKnown RBP5.31□□□□□ -1.56
RPB9YGL070C NIS1P53939 407 aa5.31□□□□□ -1.56
RPB9YGL070C OPT2Q06593 877 aa5.31□□□□□ -1.56
RPB9YGL070C SPA2P23201 1466 aaKnown RBP5.31□□□□□ -1.56
RPB9YGL070C IES2P40154 320 aa5.3□□□□□ -1.56
RPB9YGL070C TEA1P47988 759 aa5.3□□□□□ -1.56
RPB9YGL070C SRF1Q12516 437 aa5.29□□□□□ -1.56
RPB9YGL070C MTC5Q03897 1148 aa5.27□□□□□ -1.57
RPB9YGL070C YLR346CQ06139 101 aa5.27□□□□□ -1.57
RPB9YGL070C SLY41P22215 453 aa5.26□□□□□ -1.57
RPB9YGL070C KIP2P28743 706 aa5.26□□□□□ -1.57
RPB9YGL070C DSF2P38213 736 aa5.25□□□□□ -1.57
RPB9YGL070C YGR035CP53222 116 aa5.25□□□□□ -1.57
RPB9YGL070C TYW1Q08960 810 aaKnown RBP5.25□□□□□ -1.57
RPB9YGL070C LEU3P08638 886 aa5.24□□□□□ -1.57
RPB9YGL070C TRK2P28584 889 aa5.24□□□□□ -1.57
RPB9YGL070C GLY1P37303 387 aaKnown RBP5.24□□□□□ -1.57
RPB9YGL070C YIR007WP40566 764 aa5.24□□□□□ -1.57
RPB9YGL070C NUP42P49686 430 aaKnown RBP5.24□□□□□ -1.57
RPB9YGL070C RPA14P50106 137 aa5.24□□□□□ -1.57
RPB9YGL070C TBF1Q02457 562 aa5.24□□□□□ -1.57
RPB9YGL070C ALR1Q08269 859 aa5.24□□□□□ -1.57
RPB9YGL070C YDL206WQ12424 762 aa5.24□□□□□ -1.57
RPB9YGL070C MRT4P33201 236 aaKnown RBP5.23□□□□□ -1.57
RPB9YGL070C IXR1P33417 597 aa5.23□□□□□ -1.57
RPB9YGL070C NUP85P46673 744 aa5.23□□□□□ -1.57
RPB9YGL070C FPK1P53739 893 aa5.23□□□□□ -1.57
RPB9YGL070C YMR196WQ04336 1088 aa5.23□□□□□ -1.57
RPB9YGL070C HSL1P34244 1518 aa5.23□□□□□ -1.57
RPB9YGL070C SCW11P53189 542 aa5.22□□□□□ -1.57
RPB9YGL070C HPF1Q05164 967 aa5.21□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms