Protein–RNA interactions for Protein: P38859

DNA2, DNA replication ATP-dependent helicase/nuclease DNA2, yeastyeast

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DNA2P38859 YML009W-BYML009W-B 477 nt37.32■■■■□ 3.57
DNA2P38859 NOP1YDL014W 984 nt36.46■■■■□ 3.43
DNA2P38859 YKL036CYKL036C 393 nt35.32■■■■□ 3.25
DNA2P38859 NSR1YGR159C 1245 nt35.32■■■■□ 3.24
DNA2P38859 YJL027CYJL027C 417 nt33.3■■■□□ 2.92
DNA2P38859 SCS3YGL126W 1143 nt33.12■■■□□ 2.89
DNA2P38859 Q0297Q0297 156 nt32.56■■■□□ 2.8
DNA2P38859 SRX1YKL086W 384 nt32.07■■■□□ 2.72
DNA2P38859 SCJ1YMR214W 1134 nt30.88■■■□□ 2.53
DNA2P38859 YCR051WYCR051W 669 nt30.67■■■□□ 2.5
DNA2P38859 YOL085CYOL085C 342 nt30.53■■■□□ 2.48
DNA2P38859 MDJ1YFL016C 1536 nt30.39■■■□□ 2.46
DNA2P38859 PKP1YIL042C 1185 nt30.17■■■□□ 2.42
DNA2P38859 ATS1YAL020C 1002 nt29.88■■■□□ 2.37
DNA2P38859 RPP1BYDL130W 321 nt29.25■■■□□ 2.27
DNA2P38859 RTC3YHR087W 336 nt28.36■■■□□ 2.13
DNA2P38859 TRN1tP(UGG)A 72 nt28.19■■■□□ 2.1
DNA2P38859 SUF9tP(UGG)F 72 nt28.19■■■□□ 2.1
DNA2P38859 SUF8tP(UGG)H 72 nt28.19■■■□□ 2.1
DNA2P38859 tP(UGG)LtP(UGG)L 72 nt28.19■■■□□ 2.1
DNA2P38859 SUF7tP(UGG)M 72 nt28.19■■■□□ 2.1
DNA2P38859 tP(UGG)N1tP(UGG)N1 72 nt28.19■■■□□ 2.1
DNA2P38859 tP(UGG)N2tP(UGG)N2 72 nt28.19■■■□□ 2.1
DNA2P38859 tP(UGG)O1tP(UGG)O1 72 nt28.19■■■□□ 2.1
DNA2P38859 SUF11tP(UGG)O2 72 nt28.19■■■□□ 2.1
DNA2P38859 PET122YER153C 765 nt27.98■■■□□ 2.07
DNA2P38859 CCC1YLR220W 969 nt27.97■■■□□ 2.07
DNA2P38859 SCR1SCR1 522 nt27.84■■■□□ 2.05
DNA2P38859 DBP2YNL112W 1641 nt27.41■■□□□ 1.98
DNA2P38859 PST2YDR032C 597 nt27.38■■□□□ 1.97
DNA2P38859 YKL097CYKL097C 411 nt27.21■■□□□ 1.95
DNA2P38859 RSB1YOR049C 1065 nt27.2■■□□□ 1.94
DNA2P38859 RRN5YLR141W 1092 nt27.19■■□□□ 1.94
DNA2P38859 tP(UGG)O3tP(UGG)O3 72 nt27.13■■□□□ 1.93
DNA2P38859 YER088W-BYER088W-B 147 nt26.68■■□□□ 1.86
DNA2P38859 SHU1YHL006C 453 nt26.1■■□□□ 1.77
DNA2P38859 YDJ1YNL064C 1230 nt26.06■■□□□ 1.76
DNA2P38859 YOR139CYOR139C 393 nt25.97■■□□□ 1.75
DNA2P38859 RVS167YDR388W 1449 nt25.88■■□□□ 1.73
DNA2P38859 GAR1YHR089C 618 nt25.46■■□□□ 1.67
DNA2P38859 SHR5YOL110W 714 nt25.43■■□□□ 1.66
DNA2P38859 YAL037C-BYAL037C-B 975 nt25.35■■□□□ 1.65
DNA2P38859 NPL3YDR432W 1245 nt25.27■■□□□ 1.64
DNA2P38859 YBR190WYBR190W 312 nt25.12■■□□□ 1.61
DNA2P38859 BSC6YOL137W 1494 nt24.7■■□□□ 1.54
DNA2P38859 tM(CAU)CtM(CAU)C 72 nt24.66■■□□□ 1.54
DNA2P38859 IMT4tM(CAU)E 72 nt24.66■■□□□ 1.54
DNA2P38859 IMT3tM(CAU)J3 72 nt24.66■■□□□ 1.54
DNA2P38859 IMT1tM(CAU)O1 72 nt24.66■■□□□ 1.54
DNA2P38859 IMT2tM(CAU)P 72 nt24.66■■□□□ 1.54
DNA2P38859 TIR1YER011W 765 nt24.47■■□□□ 1.51
DNA2P38859 MOT3YMR070W 1473 nt24.47■■□□□ 1.51
DNA2P38859 DEP1YAL013W 1218 nt24.46■■□□□ 1.51
DNA2P38859 MNP1YGL068W 585 nt24.45■■□□□ 1.5
DNA2P38859 RPN10YHR200W 807 nt24.39■■□□□ 1.49
DNA2P38859 YOL037CYOL037C 354 nt24.3■■□□□ 1.48
DNA2P38859 SRB2YHR041C 633 nt24.12■■□□□ 1.45
DNA2P38859 HOM6YJR139C 1080 nt24.05■■□□□ 1.44
DNA2P38859 UBX6YJL048C 1191 nt23.98■■□□□ 1.43
DNA2P38859 PUS2YGL063W 1113 nt23.96■■□□□ 1.43
DNA2P38859 SSA1YAL005C 1929 nt23.94■■□□□ 1.42
DNA2P38859 YNL208WYNL208W 600 nt23.92■■□□□ 1.42
DNA2P38859 YGR021WYGR021W 873 nt23.89■■□□□ 1.41
DNA2P38859 URN1YPR152C 1398 nt23.88■■□□□ 1.41
DNA2P38859 WWM1YFL010C 636 nt23.8■■□□□ 1.4
DNA2P38859 MRPL8YJL063C 717 nt23.79■■□□□ 1.4
DNA2P38859 RKM5YLR137W 1104 nt23.68■■□□□ 1.38
DNA2P38859 YLR281CYLR281C 468 nt23.6■■□□□ 1.37
DNA2P38859 FMP45YDL222C 930 nt23.48■■□□□ 1.35
DNA2P38859 WHI5YOR083W 888 nt23.35■■□□□ 1.33
DNA2P38859 ADO1YJR105W 1023 nt23.32■■□□□ 1.32
DNA2P38859 YPR011CYPR011C 981 nt23.29■■□□□ 1.32
DNA2P38859 YEL076C-AYEL076C-A 651 nt23.22■■□□□ 1.31
DNA2P38859 YEL076CYEL076C 651 nt23.22■■□□□ 1.31
DNA2P38859 YLR464WYLR464W 651 nt23.22■■□□□ 1.31
DNA2P38859 YLR236CYLR236C 324 nt23.21■■□□□ 1.31
DNA2P38859 YFL021C-AYFL021C-A 855 nt23.18■■□□□ 1.3
DNA2P38859 YCH1YGR203W 447 nt23.17■■□□□ 1.3
DNA2P38859 YFL015W-AYFL015W-A 318 nt23.12■■□□□ 1.29
DNA2P38859 OPI9YLR338W 858 nt23.06■■□□□ 1.28
DNA2P38859 YJR120WYJR120W 351 nt23.03■■□□□ 1.28
DNA2P38859 DSK2YMR276W 1122 nt23.03■■□□□ 1.28
DNA2P38859 RTG1YOL067C 534 nt22.98■■□□□ 1.27
DNA2P38859 SSA3YBL075C 1950 nt22.93■■□□□ 1.26
DNA2P38859 SPP1YPL138C 1062 nt22.92■■□□□ 1.26
DNA2P38859 YJR018WYJR018W 363 nt22.84■■□□□ 1.25
DNA2P38859 SBA1YKL117W 651 nt22.79■■□□□ 1.24
DNA2P38859 YDR094WYDR094W 336 nt22.78■■□□□ 1.24
DNA2P38859 SAH1YER043C 1350 nt22.69■■□□□ 1.22
DNA2P38859 SIS1YNL007C 1059 nt22.67■■□□□ 1.22
DNA2P38859 LPX1YOR084W 1164 nt22.67■■□□□ 1.22
DNA2P38859 RPP2BYDR382W 333 nt22.62■■□□□ 1.21
DNA2P38859 IMP2'YIL154C 1041 nt22.59■■□□□ 1.21
DNA2P38859 BDH2YAL061W 1254 nt22.53■■□□□ 1.2
DNA2P38859 PUN1YLR414C 792 nt22.35■■□□□ 1.17
DNA2P38859 ERV46YAL042W 1248 nt22.32■■□□□ 1.16
DNA2P38859 LSM3YLR438C-A 270 nt22.31■■□□□ 1.16
DNA2P38859 YLR154C-GYLR154C-G 150 nt22.29■■□□□ 1.16
DNA2P38859 HUA1YGR268C 597 nt22.28■■□□□ 1.16
DNA2P38859 YDR433WYDR433W 441 nt21.94■■□□□ 1.1
Retrieved 100 of 7,029 protein–RNA pairs in 15.5 ms