Protein–RNA interactions for Protein: Q05471

SWR1, Helicase SWR1, yeastyeast

Predictions only

Length 1,514 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SWR1Q05471 YML009W-BYML009W-B 477 nt37.95■■■■□ 3.67
SWR1Q05471 NOP1YDL014W 984 nt36.88■■■■□ 3.49
SWR1Q05471 NSR1YGR159C 1245 nt35.97■■■■□ 3.35
SWR1Q05471 YKL036CYKL036C 393 nt35.57■■■■□ 3.28
SWR1Q05471 YJL027CYJL027C 417 nt33.49■■■□□ 2.95
SWR1Q05471 SCS3YGL126W 1143 nt33.29■■■□□ 2.92
SWR1Q05471 Q0297Q0297 156 nt32.87■■■□□ 2.85
SWR1Q05471 SRX1YKL086W 384 nt32.46■■■□□ 2.79
SWR1Q05471 MDJ1YFL016C 1536 nt31.29■■■□□ 2.6
SWR1Q05471 YCR051WYCR051W 669 nt31.06■■■□□ 2.56
SWR1Q05471 YOL085CYOL085C 342 nt30.71■■■□□ 2.51
SWR1Q05471 SCJ1YMR214W 1134 nt30.69■■■□□ 2.5
SWR1Q05471 PKP1YIL042C 1185 nt30.43■■■□□ 2.46
SWR1Q05471 ATS1YAL020C 1002 nt29.91■■■□□ 2.38
SWR1Q05471 RPP1BYDL130W 321 nt29.53■■■□□ 2.32
SWR1Q05471 TRN1tP(UGG)A 72 nt28.7■■■□□ 2.19
SWR1Q05471 SUF9tP(UGG)F 72 nt28.7■■■□□ 2.19
SWR1Q05471 SUF8tP(UGG)H 72 nt28.7■■■□□ 2.19
SWR1Q05471 tP(UGG)LtP(UGG)L 72 nt28.7■■■□□ 2.19
SWR1Q05471 SUF7tP(UGG)M 72 nt28.7■■■□□ 2.19
SWR1Q05471 tP(UGG)N1tP(UGG)N1 72 nt28.7■■■□□ 2.19
SWR1Q05471 tP(UGG)N2tP(UGG)N2 72 nt28.7■■■□□ 2.19
SWR1Q05471 tP(UGG)O1tP(UGG)O1 72 nt28.7■■■□□ 2.19
SWR1Q05471 SUF11tP(UGG)O2 72 nt28.7■■■□□ 2.19
SWR1Q05471 CCC1YLR220W 969 nt28.46■■■□□ 2.15
SWR1Q05471 PET122YER153C 765 nt28.33■■■□□ 2.13
SWR1Q05471 RTC3YHR087W 336 nt28.27■■■□□ 2.12
SWR1Q05471 SCR1SCR1 522 nt28.09■■■□□ 2.09
SWR1Q05471 DBP2YNL112W 1641 nt28.06■■■□□ 2.08
SWR1Q05471 tP(UGG)O3tP(UGG)O3 72 nt27.51■■■□□ 2
SWR1Q05471 RSB1YOR049C 1065 nt27.45■■□□□ 1.98
SWR1Q05471 RRN5YLR141W 1092 nt27.44■■□□□ 1.98
SWR1Q05471 PST2YDR032C 597 nt27.41■■□□□ 1.98
SWR1Q05471 YKL097CYKL097C 411 nt27.21■■□□□ 1.95
SWR1Q05471 YER088W-BYER088W-B 147 nt26.95■■□□□ 1.9
SWR1Q05471 RVS167YDR388W 1449 nt26.46■■□□□ 1.83
SWR1Q05471 YDJ1YNL064C 1230 nt26.4■■□□□ 1.82
SWR1Q05471 SHU1YHL006C 453 nt26.24■■□□□ 1.79
SWR1Q05471 YOR139CYOR139C 393 nt25.99■■□□□ 1.75
SWR1Q05471 SHR5YOL110W 714 nt25.94■■□□□ 1.74
SWR1Q05471 GAR1YHR089C 618 nt25.87■■□□□ 1.73
SWR1Q05471 YBR190WYBR190W 312 nt25.84■■□□□ 1.73
SWR1Q05471 YAL037C-BYAL037C-B 975 nt25.55■■□□□ 1.68
SWR1Q05471 NPL3YDR432W 1245 nt25.36■■□□□ 1.65
SWR1Q05471 DEP1YAL013W 1218 nt25.07■■□□□ 1.6
SWR1Q05471 TIR1YER011W 765 nt24.86■■□□□ 1.57
SWR1Q05471 MNP1YGL068W 585 nt24.77■■□□□ 1.56
SWR1Q05471 tM(CAU)CtM(CAU)C 72 nt24.63■■□□□ 1.53
SWR1Q05471 IMT4tM(CAU)E 72 nt24.63■■□□□ 1.53
SWR1Q05471 IMT3tM(CAU)J3 72 nt24.63■■□□□ 1.53
SWR1Q05471 IMT1tM(CAU)O1 72 nt24.63■■□□□ 1.53
SWR1Q05471 IMT2tM(CAU)P 72 nt24.63■■□□□ 1.53
SWR1Q05471 RPN10YHR200W 807 nt24.57■■□□□ 1.52
SWR1Q05471 SRB2YHR041C 633 nt24.56■■□□□ 1.52
SWR1Q05471 URN1YPR152C 1398 nt24.51■■□□□ 1.51
SWR1Q05471 YOL037CYOL037C 354 nt24.5■■□□□ 1.51
SWR1Q05471 BSC6YOL137W 1494 nt24.48■■□□□ 1.51
SWR1Q05471 MOT3YMR070W 1473 nt24.43■■□□□ 1.5
SWR1Q05471 YNL208WYNL208W 600 nt24.42■■□□□ 1.5
SWR1Q05471 SSA1YAL005C 1929 nt24.37■■□□□ 1.49
SWR1Q05471 HOM6YJR139C 1080 nt24.33■■□□□ 1.49
SWR1Q05471 YGR021WYGR021W 873 nt24.19■■□□□ 1.46
SWR1Q05471 WWM1YFL010C 636 nt24.18■■□□□ 1.46
SWR1Q05471 PUS2YGL063W 1113 nt24.06■■□□□ 1.44
SWR1Q05471 RKM5YLR137W 1104 nt23.96■■□□□ 1.43
SWR1Q05471 YLR281CYLR281C 468 nt23.75■■□□□ 1.39
SWR1Q05471 UBX6YJL048C 1191 nt23.74■■□□□ 1.39
SWR1Q05471 OPI9YLR338W 858 nt23.69■■□□□ 1.38
SWR1Q05471 FMP45YDL222C 930 nt23.63■■□□□ 1.37
SWR1Q05471 MRPL8YJL063C 717 nt23.62■■□□□ 1.37
SWR1Q05471 YJR120WYJR120W 351 nt23.6■■□□□ 1.37
SWR1Q05471 WHI5YOR083W 888 nt23.54■■□□□ 1.36
SWR1Q05471 YFL021C-AYFL021C-A 855 nt23.53■■□□□ 1.36
SWR1Q05471 YLR236CYLR236C 324 nt23.46■■□□□ 1.35
SWR1Q05471 YPR011CYPR011C 981 nt23.42■■□□□ 1.34
SWR1Q05471 SAH1YER043C 1350 nt23.4■■□□□ 1.34
SWR1Q05471 YJR018WYJR018W 363 nt23.34■■□□□ 1.33
SWR1Q05471 SSA3YBL075C 1950 nt23.33■■□□□ 1.32
SWR1Q05471 YCH1YGR203W 447 nt23.24■■□□□ 1.31
SWR1Q05471 DSK2YMR276W 1122 nt23.22■■□□□ 1.31
SWR1Q05471 ADO1YJR105W 1023 nt23.21■■□□□ 1.31
SWR1Q05471 YEL076C-AYEL076C-A 651 nt23.19■■□□□ 1.3
SWR1Q05471 YEL076CYEL076C 651 nt23.19■■□□□ 1.3
SWR1Q05471 YLR464WYLR464W 651 nt23.19■■□□□ 1.3
SWR1Q05471 RPP2BYDR382W 333 nt23.13■■□□□ 1.29
SWR1Q05471 SPP1YPL138C 1062 nt23.04■■□□□ 1.28
SWR1Q05471 RTG1YOL067C 534 nt23.03■■□□□ 1.28
SWR1Q05471 BDH2YAL061W 1254 nt22.99■■□□□ 1.27
SWR1Q05471 PUN1YLR414C 792 nt22.97■■□□□ 1.27
SWR1Q05471 LPX1YOR084W 1164 nt22.91■■□□□ 1.26
SWR1Q05471 YFL015W-AYFL015W-A 318 nt22.9■■□□□ 1.26
SWR1Q05471 IMP2'YIL154C 1041 nt22.76■■□□□ 1.23
SWR1Q05471 YDR094WYDR094W 336 nt22.69■■□□□ 1.22
SWR1Q05471 ARE1YCR048W 1833 nt22.68■■□□□ 1.22
SWR1Q05471 LSM3YLR438C-A 270 nt22.67■■□□□ 1.22
SWR1Q05471 YLR154C-GYLR154C-G 150 nt22.63■■□□□ 1.21
SWR1Q05471 SIS1YNL007C 1059 nt22.62■■□□□ 1.21
SWR1Q05471 YHR049C-AYHR049C-A 297 nt22.59■■□□□ 1.21
SWR1Q05471 PUT4YOR348C 1884 nt22.57■■□□□ 1.2
SWR1Q05471 PTC2YER089C 1395 nt22.55■■□□□ 1.2
Retrieved 100 of 7,029 protein–RNA pairs in 14 ms