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Protein–RNA interactions for Protein: Q05471
SWR1, Helicase SWR1, yeast
Predictions only
Length
1,514 aa
.
Download Table
Protein
RNA
Prediction (catRAPID)
Interaction (RIP-Chip)
Gene
UniProt Accession
Gene
Ensembl Transcript ID
Length
Transcript Status
Prediction Score
Prediction z-Score
Detected Interaction
SWR1
Q05471
YML009W-B
YML009W-B
477 nt
37.95
■■■■□ 3.67
SWR1
Q05471
NOP1
YDL014W
984 nt
36.88
■■■■□ 3.49
SWR1
Q05471
NSR1
YGR159C
1245 nt
35.97
■■■■□ 3.35
SWR1
Q05471
YKL036C
YKL036C
393 nt
35.57
■■■■□ 3.28
SWR1
Q05471
YJL027C
YJL027C
417 nt
33.49
■■■□□ 2.95
SWR1
Q05471
SCS3
YGL126W
1143 nt
33.29
■■■□□ 2.92
SWR1
Q05471
Q0297
Q0297
156 nt
32.87
■■■□□ 2.85
SWR1
Q05471
SRX1
YKL086W
384 nt
32.46
■■■□□ 2.79
SWR1
Q05471
MDJ1
YFL016C
1536 nt
31.29
■■■□□ 2.6
SWR1
Q05471
YCR051W
YCR051W
669 nt
31.06
■■■□□ 2.56
SWR1
Q05471
YOL085C
YOL085C
342 nt
30.71
■■■□□ 2.51
SWR1
Q05471
SCJ1
YMR214W
1134 nt
30.69
■■■□□ 2.5
SWR1
Q05471
PKP1
YIL042C
1185 nt
30.43
■■■□□ 2.46
SWR1
Q05471
ATS1
YAL020C
1002 nt
29.91
■■■□□ 2.38
SWR1
Q05471
RPP1B
YDL130W
321 nt
29.53
■■■□□ 2.32
SWR1
Q05471
TRN1
tP(UGG)A
72 nt
28.7
■■■□□ 2.19
SWR1
Q05471
SUF9
tP(UGG)F
72 nt
28.7
■■■□□ 2.19
SWR1
Q05471
SUF8
tP(UGG)H
72 nt
28.7
■■■□□ 2.19
SWR1
Q05471
tP(UGG)L
tP(UGG)L
72 nt
28.7
■■■□□ 2.19
SWR1
Q05471
SUF7
tP(UGG)M
72 nt
28.7
■■■□□ 2.19
SWR1
Q05471
tP(UGG)N1
tP(UGG)N1
72 nt
28.7
■■■□□ 2.19
SWR1
Q05471
tP(UGG)N2
tP(UGG)N2
72 nt
28.7
■■■□□ 2.19
SWR1
Q05471
tP(UGG)O1
tP(UGG)O1
72 nt
28.7
■■■□□ 2.19
SWR1
Q05471
SUF11
tP(UGG)O2
72 nt
28.7
■■■□□ 2.19
SWR1
Q05471
CCC1
YLR220W
969 nt
28.46
■■■□□ 2.15
SWR1
Q05471
PET122
YER153C
765 nt
28.33
■■■□□ 2.13
SWR1
Q05471
RTC3
YHR087W
336 nt
28.27
■■■□□ 2.12
SWR1
Q05471
SCR1
SCR1
522 nt
28.09
■■■□□ 2.09
SWR1
Q05471
DBP2
YNL112W
1641 nt
28.06
■■■□□ 2.08
SWR1
Q05471
tP(UGG)O3
tP(UGG)O3
72 nt
27.51
■■■□□ 2
SWR1
Q05471
RSB1
YOR049C
1065 nt
27.45
■■□□□ 1.98
SWR1
Q05471
RRN5
YLR141W
1092 nt
27.44
■■□□□ 1.98
SWR1
Q05471
PST2
YDR032C
597 nt
27.41
■■□□□ 1.98
SWR1
Q05471
YKL097C
YKL097C
411 nt
27.21
■■□□□ 1.95
SWR1
Q05471
YER088W-B
YER088W-B
147 nt
26.95
■■□□□ 1.9
SWR1
Q05471
RVS167
YDR388W
1449 nt
26.46
■■□□□ 1.83
SWR1
Q05471
YDJ1
YNL064C
1230 nt
26.4
■■□□□ 1.82
SWR1
Q05471
SHU1
YHL006C
453 nt
26.24
■■□□□ 1.79
SWR1
Q05471
YOR139C
YOR139C
393 nt
25.99
■■□□□ 1.75
SWR1
Q05471
SHR5
YOL110W
714 nt
25.94
■■□□□ 1.74
SWR1
Q05471
GAR1
YHR089C
618 nt
25.87
■■□□□ 1.73
SWR1
Q05471
YBR190W
YBR190W
312 nt
25.84
■■□□□ 1.73
SWR1
Q05471
YAL037C-B
YAL037C-B
975 nt
25.55
■■□□□ 1.68
SWR1
Q05471
NPL3
YDR432W
1245 nt
25.36
■■□□□ 1.65
SWR1
Q05471
DEP1
YAL013W
1218 nt
25.07
■■□□□ 1.6
SWR1
Q05471
TIR1
YER011W
765 nt
24.86
■■□□□ 1.57
SWR1
Q05471
MNP1
YGL068W
585 nt
24.77
■■□□□ 1.56
SWR1
Q05471
tM(CAU)C
tM(CAU)C
72 nt
24.63
■■□□□ 1.53
SWR1
Q05471
IMT4
tM(CAU)E
72 nt
24.63
■■□□□ 1.53
SWR1
Q05471
IMT3
tM(CAU)J3
72 nt
24.63
■■□□□ 1.53
SWR1
Q05471
IMT1
tM(CAU)O1
72 nt
24.63
■■□□□ 1.53
SWR1
Q05471
IMT2
tM(CAU)P
72 nt
24.63
■■□□□ 1.53
SWR1
Q05471
RPN10
YHR200W
807 nt
24.57
■■□□□ 1.52
SWR1
Q05471
SRB2
YHR041C
633 nt
24.56
■■□□□ 1.52
SWR1
Q05471
URN1
YPR152C
1398 nt
24.51
■■□□□ 1.51
SWR1
Q05471
YOL037C
YOL037C
354 nt
24.5
■■□□□ 1.51
SWR1
Q05471
BSC6
YOL137W
1494 nt
24.48
■■□□□ 1.51
SWR1
Q05471
MOT3
YMR070W
1473 nt
24.43
■■□□□ 1.5
SWR1
Q05471
YNL208W
YNL208W
600 nt
24.42
■■□□□ 1.5
SWR1
Q05471
SSA1
YAL005C
1929 nt
24.37
■■□□□ 1.49
SWR1
Q05471
HOM6
YJR139C
1080 nt
24.33
■■□□□ 1.49
SWR1
Q05471
YGR021W
YGR021W
873 nt
24.19
■■□□□ 1.46
SWR1
Q05471
WWM1
YFL010C
636 nt
24.18
■■□□□ 1.46
SWR1
Q05471
PUS2
YGL063W
1113 nt
24.06
■■□□□ 1.44
SWR1
Q05471
RKM5
YLR137W
1104 nt
23.96
■■□□□ 1.43
SWR1
Q05471
YLR281C
YLR281C
468 nt
23.75
■■□□□ 1.39
SWR1
Q05471
UBX6
YJL048C
1191 nt
23.74
■■□□□ 1.39
SWR1
Q05471
OPI9
YLR338W
858 nt
23.69
■■□□□ 1.38
SWR1
Q05471
FMP45
YDL222C
930 nt
23.63
■■□□□ 1.37
SWR1
Q05471
MRPL8
YJL063C
717 nt
23.62
■■□□□ 1.37
SWR1
Q05471
YJR120W
YJR120W
351 nt
23.6
■■□□□ 1.37
SWR1
Q05471
WHI5
YOR083W
888 nt
23.54
■■□□□ 1.36
SWR1
Q05471
YFL021C-A
YFL021C-A
855 nt
23.53
■■□□□ 1.36
SWR1
Q05471
YLR236C
YLR236C
324 nt
23.46
■■□□□ 1.35
SWR1
Q05471
YPR011C
YPR011C
981 nt
23.42
■■□□□ 1.34
SWR1
Q05471
SAH1
YER043C
1350 nt
23.4
■■□□□ 1.34
SWR1
Q05471
YJR018W
YJR018W
363 nt
23.34
■■□□□ 1.33
SWR1
Q05471
SSA3
YBL075C
1950 nt
23.33
■■□□□ 1.32
SWR1
Q05471
YCH1
YGR203W
447 nt
23.24
■■□□□ 1.31
SWR1
Q05471
DSK2
YMR276W
1122 nt
23.22
■■□□□ 1.31
SWR1
Q05471
ADO1
YJR105W
1023 nt
23.21
■■□□□ 1.31
SWR1
Q05471
YEL076C-A
YEL076C-A
651 nt
23.19
■■□□□ 1.3
SWR1
Q05471
YEL076C
YEL076C
651 nt
23.19
■■□□□ 1.3
SWR1
Q05471
YLR464W
YLR464W
651 nt
23.19
■■□□□ 1.3
SWR1
Q05471
RPP2B
YDR382W
333 nt
23.13
■■□□□ 1.29
SWR1
Q05471
SPP1
YPL138C
1062 nt
23.04
■■□□□ 1.28
SWR1
Q05471
RTG1
YOL067C
534 nt
23.03
■■□□□ 1.28
SWR1
Q05471
BDH2
YAL061W
1254 nt
22.99
■■□□□ 1.27
SWR1
Q05471
PUN1
YLR414C
792 nt
22.97
■■□□□ 1.27
SWR1
Q05471
LPX1
YOR084W
1164 nt
22.91
■■□□□ 1.26
SWR1
Q05471
YFL015W-A
YFL015W-A
318 nt
22.9
■■□□□ 1.26
SWR1
Q05471
IMP2'
YIL154C
1041 nt
22.76
■■□□□ 1.23
SWR1
Q05471
YDR094W
YDR094W
336 nt
22.69
■■□□□ 1.22
SWR1
Q05471
ARE1
YCR048W
1833 nt
22.68
■■□□□ 1.22
SWR1
Q05471
LSM3
YLR438C-A
270 nt
22.67
■■□□□ 1.22
SWR1
Q05471
YLR154C-G
YLR154C-G
150 nt
22.63
■■□□□ 1.21
SWR1
Q05471
SIS1
YNL007C
1059 nt
22.62
■■□□□ 1.21
SWR1
Q05471
YHR049C-A
YHR049C-A
297 nt
22.59
■■□□□ 1.21
SWR1
Q05471
PUT4
YOR348C
1884 nt
22.57
■■□□□ 1.2
SWR1
Q05471
PTC2
YER089C
1395 nt
22.55
■■□□□ 1.2
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Retrieved 100 of 7,029 protein–RNA pairs in 9.3 ms