RNA–Protein interactions for RNA: YGL070C

RPB9, Transcript of RNA polymerase II subunit B12.6, yeastyeast

Gene RPB9, Length 369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB9YGL070C MTC1P47018 478 aaKnown RBP11.38□□□□□ -0.59
RPB9YGL070C FAP1P53971 965 aa10.89□□□□□ -0.67
RPB9YGL070C PRY3P47033 881 aa10.26□□□□□ -0.77
RPB9YGL070C DRS1P32892 752 aaKnown RBP10.06□□□□□ -0.8
RPB9YGL070C PRI1P10363 409 aa9.91□□□□□ -0.82
RPB9YGL070C AAD16Q02895 342 aa9.91□□□□□ -0.82
RPB9YGL070C YCK3P39962 524 aa9.66□□□□□ -0.86
RPB9YGL070C HAA1Q12753 694 aaKnown RBP9.57□□□□□ -0.88
RPB9YGL070C ISW2Q08773 1120 aa9.55□□□□□ -0.88
RPB9YGL070C RPG1P38249 964 aaKnown RBP9.47□□□□□ -0.89
RPB9YGL070C TSR3Q12094 313 aaKnown RBP9.34□□□□□ -0.91
RPB9YGL070C DIP2Q12220 943 aaPredicted RBP9□□□□□ -0.97
RPB9YGL070C MRPL32P25348 183 aa8.96□□□□□ -0.98
RPB9YGL070C RSE1Q04693 1361 aaKnown RBP8.88□□□□□ -0.99
RPB9YGL070C YGL015CP33199 130 aa8.74□□□□□ -1.01
RPB9YGL070C REB1P21538 810 aa8.66□□□□□ -1.02
RPB9YGL070C RPL17AP05740 184 aaKnown RBP8.64□□□□□ -1.03
RPB9YGL070C RPL17BP46990 184 aaKnown RBP8.64□□□□□ -1.03
RPB9YGL070C AVT3P36062 692 aa8.52□□□□□ -1.05
RPB9YGL070C CDC27P38042 758 aa8.42□□□□□ -1.06
RPB9YGL070C BUD31P25337 157 aaPredicted RBP8.28□□□□□ -1.08
RPB9YGL070C UBP10P53874 792 aaPredicted RBP8.27□□□□□ -1.09
RPB9YGL070C YKR023WP36119 530 aaKnown RBP8.26□□□□□ -1.09
RPB9YGL070C MAP2P38174 421 aaKnown RBP8.23□□□□□ -1.09
RPB9YGL070C SPT21P35209 758 aa8.22□□□□□ -1.09
RPB9YGL070C DCD1P06773 312 aa8.09□□□□□ -1.11
RPB9YGL070C HOP09932 586 aa8.09□□□□□ -1.11
RPB9YGL070C BFR2Q06631 534 aaKnown RBP8.09□□□□□ -1.11
RPB9YGL070C TFC8Q12308 588 aa8.09□□□□□ -1.11
RPB9YGL070C SCY1P53009 804 aa7.96□□□□□ -1.14
RPB9YGL070C TIF4632P39936 914 aaKnown RBP7.92□□□□□ -1.14
RPB9YGL070C SLX5P32828 619 aaKnown RBP7.9□□□□□ -1.14
RPB9YGL070C TGL3P40308 642 aa7.88□□□□□ -1.15
RPB9YGL070C SIS1P25294 352 aaKnown RBP7.84□□□□□ -1.15
RPB9YGL070C UBP9P39967 754 aa7.82□□□□□ -1.16
RPB9YGL070C RIM101P33400 625 aa7.8□□□□□ -1.16
RPB9YGL070C BCH2P36122 765 aa7.79□□□□□ -1.16
RPB9YGL070C EPS1P40557 701 aa7.58□□□□□ -1.2
RPB9YGL070C BDF1P35817 686 aa7.55□□□□□ -1.2
RPB9YGL070C OXP1P28273 1286 aa7.52□□□□□ -1.21
RPB9YGL070C MST1P07236 462 aa7.48□□□□□ -1.21
RPB9YGL070C YBL029C-AQ3E756 94 aa7.48□□□□□ -1.21
RPB9YGL070C PTP3P40048 928 aa7.45□□□□□ -1.22
RPB9YGL070C YOR238WQ08634 303 aa7.44□□□□□ -1.22
RPB9YGL070C YIL055CP40523 627 aaKnown RBP7.41□□□□□ -1.22
RPB9YGL070C NSR1P27476 414 aaKnown RBP RIP-Chip data7.38□□□□□ -1.23not detected
RPB9YGL070C VNX1P42839 908 aa7.36□□□□□ -1.23
RPB9YGL070C BBC1P47068 1157 aa7.34□□□□□ -1.23
RPB9YGL070C YAP5P40574 245 aa7.31□□□□□ -1.24
RPB9YGL070C RSM7P47150 247 aa7.3□□□□□ -1.24
RPB9YGL070C AI2P03876 854 aa7.29□□□□□ -1.24
RPB9YGL070C SPP1Q03012 353 aa7.29□□□□□ -1.24
RPB9YGL070C WSC3Q12215 556 aa7.28□□□□□ -1.24
RPB9YGL070C YAH1Q12184 172 aaKnown RBP7.24□□□□□ -1.25
RPB9YGL070C AIR2Q12476 344 aaKnown RBP7.2□□□□□ -1.26
RPB9YGL070C TIF11P38912 153 aaKnown RBP7.19□□□□□ -1.26
RPB9YGL070C GTT3P39996 337 aa7.19□□□□□ -1.26
RPB9YGL070C FKH1P40466 484 aa7.18□□□□□ -1.26
RPB9YGL070C YJL171CP46992 396 aa7.15□□□□□ -1.26
RPB9YGL070C LDB19Q12502 818 aa7.09□□□□□ -1.27
RPB9YGL070C PIB1Q06651 286 aa7.08□□□□□ -1.28
RPB9YGL070C ULI1P43604 169 aa7.07□□□□□ -1.28
RPB9YGL070C YLR271WQ06152 274 aa7.07□□□□□ -1.28
RPB9YGL070C IOC2Q12072 812 aa7.05□□□□□ -1.28
RPB9YGL070C PSD2P53037 1138 aaKnown RBP7.04□□□□□ -1.28
RPB9YGL070C BMT6Q12291 365 aa7.02□□□□□ -1.29
RPB9YGL070C MRM1P25270 412 aa7□□□□□ -1.29
RPB9YGL070C MSB4Q12317 492 aa6.99□□□□□ -1.29
RPB9YGL070C EAP1P36041 632 aaKnown RBP6.95□□□□□ -1.3
RPB9YGL070C YOL036WQ08206 761 aa6.93□□□□□ -1.3
RPB9YGL070C TFA1P36100 482 aa6.92□□□□□ -1.3
RPB9YGL070C SET4P42948 560 aa6.92□□□□□ -1.3
RPB9YGL070C RTG1P32607 177 aa6.91□□□□□ -1.3
RPB9YGL070C TRP5P00931 707 aaKnown RBP6.89□□□□□ -1.31
RPB9YGL070C YMR1P47147 688 aaKnown RBP RIP-Chip data6.87□□□□□ -1.31not detected
RPB9YGL070C DBP1P24784 617 aaKnown RBP6.86□□□□□ -1.31
RPB9YGL070C NCR1Q12200 1170 aa6.86□□□□□ -1.31
RPB9YGL070C ARP8Q12386 881 aaKnown RBP RIP-Chip data6.86□□□□□ -1.31not detected
RPB9YGL070C VPS29P38759 282 aa6.85□□□□□ -1.31
RPB9YGL070C SSP1P38871 571 aa6.84□□□□□ -1.31
RPB9YGL070C YFR006WP43590 535 aa6.84□□□□□ -1.31
RPB9YGL070C YNL035CP53962 389 aaKnown RBP6.84□□□□□ -1.31
RPB9YGL070C VMA1P17255 1071 aaKnown RBP6.82□□□□□ -1.32
RPB9YGL070C SEC61P32915 480 aa6.82□□□□□ -1.32
RPB9YGL070C CST9Q06032 482 aa6.81□□□□□ -1.32
RPB9YGL070C RTG3P38165 486 aa6.8□□□□□ -1.32
RPB9YGL070C STS1P38637 319 aa6.8□□□□□ -1.32
RPB9YGL070C SAM3Q08986 587 aa6.79□□□□□ -1.32
RPB9YGL070C MGA2P40578 1113 aa6.74□□□□□ -1.33
RPB9YGL070C TFG1P41895 735 aaPredicted RBP6.74□□□□□ -1.33
RPB9YGL070C SAP30P38429 201 aa6.71□□□□□ -1.34
RPB9YGL070C RCR1P38212 213 aa6.7□□□□□ -1.34
RPB9YGL070C DAN4P47179 1161 aa6.7□□□□□ -1.34
RPB9YGL070C ABP1P15891 592 aaKnown RBP6.69□□□□□ -1.34
RPB9YGL070C JIP4Q03361 876 aa6.69□□□□□ -1.34
RPB9YGL070C YDL129WQ07555 291 aa6.67□□□□□ -1.34
RPB9YGL070C GYP5Q12344 894 aa6.67□□□□□ -1.34
RPB9YGL070C BCK2P33306 851 aa6.66□□□□□ -1.34
RPB9YGL070C HTA1P04911 132 aaKnown RBP6.65□□□□□ -1.34
RPB9YGL070C HTA2P04912 132 aa6.65□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 9.5 ms