RNA–Protein interactions for RNA: YCR094W

CDC50, Transcript of Endosomal protein that interacts with phospholipid flippase Drs2p, yeastyeast

Gene CDC50, Length 1,176 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC50YCR094W TY1A-BRQ12217 440 aa7.09□□□□□ -1.27
CDC50YCR094W TY1A-NL2Q12470 440 aa7.09□□□□□ -1.27
CDC50YCR094W TY1A-GR2Q12485 440 aa7.09□□□□□ -1.27
CDC50YCR094W GCD11P32481 527 aaKnown RBP7.08□□□□□ -1.28
CDC50YCR094W YPL062WQ02781 134 aa7.08□□□□□ -1.28
CDC50YCR094W BRE2P43132 505 aa7.07□□□□□ -1.28
CDC50YCR094W LAM6Q08001 693 aa7.06□□□□□ -1.28
CDC50YCR094W SPT16P32558 1035 aaKnown RBP7.05□□□□□ -1.28
CDC50YCR094W MVP1P40959 511 aaKnown RBP7.04□□□□□ -1.28
CDC50YCR094W COX6P00427 148 aa7.03□□□□□ -1.28
CDC50YCR094W GCR2Q01722 534 aa7.03□□□□□ -1.28
CDC50YCR094W VPS70P47161 811 aa7.01□□□□□ -1.29
CDC50YCR094W FRK1Q03002 865 aaPredicted RBP7.01□□□□□ -1.29
CDC50YCR094W YPR109WQ06104 294 aa7.01□□□□□ -1.29
CDC50YCR094W MAK21Q12176 1025 aaKnown RBP7.01□□□□□ -1.29
CDC50YCR094W RGR1P19263 1082 aa6.99□□□□□ -1.29
CDC50YCR094W GAR1P28007 205 aaKnown RBP6.99□□□□□ -1.29
CDC50YCR094W RRN7P40992 514 aa6.99□□□□□ -1.29
CDC50YCR094W BDP1P46678 594 aa6.98□□□□□ -1.29
CDC50YCR094W CDC4P07834 779 aa6.97□□□□□ -1.29
CDC50YCR094W PAT1P25644 796 aaKnown RBP6.95□□□□□ -1.3
CDC50YCR094W GBP2P25555 427 aaKnown RBP RIP-Chip data6.94□□□□□ -1.3not detected
CDC50YCR094W ERF2Q06551 359 aa6.93□□□□□ -1.3
CDC50YCR094W KEX2P13134 814 aa6.92□□□□□ -1.3
CDC50YCR094W HED1Q03937 162 aa6.92□□□□□ -1.3
CDC50YCR094W MET22P32179 357 aa6.91□□□□□ -1.3
CDC50YCR094W ENV9Q08651 330 aa6.87□□□□□ -1.31
CDC50YCR094W PAC1P39946 494 aaKnown RBP6.86□□□□□ -1.31
CDC50YCR094W MOD5P07884 428 aa6.85□□□□□ -1.31
CDC50YCR094W MET32Q12041 191 aa6.84□□□□□ -1.31
CDC50YCR094W AGE1Q04412 482 aa6.83□□□□□ -1.32
CDC50YCR094W PSE1P32337 1089 aaKnown RBP6.82□□□□□ -1.32
CDC50YCR094W ASH1P34233 588 aa6.82□□□□□ -1.32
CDC50YCR094W YDR444WQ04093 687 aa6.82□□□□□ -1.32
CDC50YCR094W PBS2P08018 668 aa6.81□□□□□ -1.32
CDC50YCR094W TUB4P53378 473 aa6.8□□□□□ -1.32
CDC50YCR094W PUS5Q06244 254 aa6.8□□□□□ -1.32
CDC50YCR094W AFT1P22149 690 aa6.79□□□□□ -1.32
CDC50YCR094W CLB5P30283 435 aa6.77□□□□□ -1.33
CDC50YCR094W CKB1P43639 278 aa6.77□□□□□ -1.33
CDC50YCR094W HST3P53687 447 aa6.77□□□□□ -1.33
CDC50YCR094W RTF1P53064 558 aa6.76□□□□□ -1.33
CDC50YCR094W LCB5Q06147 687 aaKnown RBP6.76□□□□□ -1.33
CDC50YCR094W YDL176WQ12027 708 aa6.75□□□□□ -1.33
CDC50YCR094W YNL115CP53925 644 aa6.74□□□□□ -1.33
CDC50YCR094W SIT4P20604 311 aa6.72□□□□□ -1.33
CDC50YCR094W RRD1P40454 393 aaKnown RBP6.72□□□□□ -1.33
CDC50YCR094W YJR115WP47152 169 aa6.71□□□□□ -1.34
CDC50YCR094W MAM3Q12296 706 aa6.71□□□□□ -1.34
CDC50YCR094W TPD3P31383 635 aa6.68□□□□□ -1.34
CDC50YCR094W KXD1P53158 218 aa6.68□□□□□ -1.34
CDC50YCR094W IES2P40154 320 aa6.67□□□□□ -1.34
CDC50YCR094W TEA1P47988 759 aa6.66□□□□□ -1.34
CDC50YCR094W NIS1P53939 407 aa6.66□□□□□ -1.34
CDC50YCR094W DSF2P38213 736 aa6.65□□□□□ -1.34
CDC50YCR094W HXT10P43581 546 aa6.65□□□□□ -1.34
CDC50YCR094W MSB3P48566 633 aaPredicted RBP6.64□□□□□ -1.35
CDC50YCR094W PDC1P06169 563 aaKnown RBP6.63□□□□□ -1.35
CDC50YCR094W NUP42P49686 430 aaKnown RBP6.63□□□□□ -1.35
CDC50YCR094W SYH1Q02875 849 aaKnown RBP6.63□□□□□ -1.35
CDC50YCR094W SLY41P22215 453 aa6.59□□□□□ -1.35
CDC50YCR094W UGA3P26370 528 aa6.58□□□□□ -1.36
CDC50YCR094W ACO2P39533 789 aa6.58□□□□□ -1.36
CDC50YCR094W FPK1P53739 893 aa6.58□□□□□ -1.36
CDC50YCR094W CAF120P53836 1060 aa6.58□□□□□ -1.36
CDC50YCR094W PTK2P47116 818 aaKnown RBP6.57□□□□□ -1.36
CDC50YCR094W DIT2P21595 489 aa6.56□□□□□ -1.36
CDC50YCR094W OPT2Q06593 877 aa6.56□□□□□ -1.36
CDC50YCR094W RPA14P50106 137 aa6.55□□□□□ -1.36
CDC50YCR094W SAS10Q12136 610 aaPredicted RBP6.55□□□□□ -1.36
CDC50YCR094W KIP2P28743 706 aa6.54□□□□□ -1.36
CDC50YCR094W PUS6P53294 404 aa6.54□□□□□ -1.36
CDC50YCR094W YMR196WQ04336 1088 aa6.54□□□□□ -1.36
CDC50YCR094W YPR097WQ06839 1073 aa6.54□□□□□ -1.36
CDC50YCR094W ALR1Q08269 859 aa6.54□□□□□ -1.36
CDC50YCR094W YDL206WQ12424 762 aa6.54□□□□□ -1.36
CDC50YCR094W SRF1Q12516 437 aa6.53□□□□□ -1.36
CDC50YCR094W MRT4P33201 236 aaKnown RBP6.52□□□□□ -1.37
CDC50YCR094W TBF1Q02457 562 aa6.52□□□□□ -1.37
CDC50YCR094W YLR346CQ06139 101 aa6.52□□□□□ -1.37
CDC50YCR094W IXR1P33417 597 aa6.51□□□□□ -1.37
CDC50YCR094W SCJ1P25303 377 aa6.5□□□□□ -1.37
CDC50YCR094W SPB4P25808 606 aaPredicted RBP6.49□□□□□ -1.37
CDC50YCR094W GLY1P37303 387 aaKnown RBP6.49□□□□□ -1.37
CDC50YCR094W NUP85P46673 744 aa6.49□□□□□ -1.37
CDC50YCR094W TRM1P15565 570 aaKnown RBP6.48□□□□□ -1.37
CDC50YCR094W TYW1Q08960 810 aaKnown RBP6.48□□□□□ -1.37
CDC50YCR094W YIR007WP40566 764 aa6.47□□□□□ -1.37
CDC50YCR094W BUB1P41695 1021 aaKnown RBP RIP-Chip data6.47□□□□□ -1.37not detected
CDC50YCR094W HST2P53686 357 aa6.47□□□□□ -1.37
CDC50YCR094W TRK2P28584 889 aa6.46□□□□□ -1.38
CDC50YCR094W RTT106P40161 455 aa6.45□□□□□ -1.38
CDC50YCR094W SCW11P53189 542 aa6.45□□□□□ -1.38
CDC50YCR094W YGR035CP53222 116 aa6.45□□□□□ -1.38
CDC50YCR094W MTC5Q03897 1148 aa6.45□□□□□ -1.38
CDC50YCR094W MIP1P15801 1254 aa6.44□□□□□ -1.38
CDC50YCR094W TY1A-BLQ12266 440 aa6.44□□□□□ -1.38
CDC50YCR094W MMP1Q12372 583 aa6.43□□□□□ -1.38
CDC50YCR094W HPF1Q05164 967 aa6.42□□□□□ -1.38
CDC50YCR094W VAC17P25591 423 aa6.4□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 48.4 ms