RNA–Protein interactions for RNA: YCR094W

CDC50, Transcript of Endosomal protein that interacts with phospholipid flippase Drs2p, yeastyeast

Gene CDC50, Length 1,176 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC50YCR094W MTC1P47018 478 aaKnown RBP13.99□□□□□ -0.17
CDC50YCR094W FAP1P53971 965 aa13.2□□□□□ -0.3
CDC50YCR094W DRS1P32892 752 aaKnown RBP12.5□□□□□ -0.41
CDC50YCR094W PRY3P47033 881 aa12.43□□□□□ -0.42
CDC50YCR094W PRI1P10363 409 aa12.11□□□□□ -0.47
CDC50YCR094W AAD16Q02895 342 aa12.1□□□□□ -0.47
CDC50YCR094W YCK3P39962 524 aa11.77□□□□□ -0.53
CDC50YCR094W ISW2Q08773 1120 aa11.7□□□□□ -0.54
CDC50YCR094W HAA1Q12753 694 aaKnown RBP11.63□□□□□ -0.55
CDC50YCR094W RPG1P38249 964 aaKnown RBP11.61□□□□□ -0.55
CDC50YCR094W TSR3Q12094 313 aaKnown RBP11.42□□□□□ -0.58
CDC50YCR094W DIP2Q12220 943 aaPredicted RBP11.16□□□□□ -0.62
CDC50YCR094W MRPL32P25348 183 aa10.96□□□□□ -0.65
CDC50YCR094W RSE1Q04693 1361 aaKnown RBP10.94□□□□□ -0.66
CDC50YCR094W YGL015CP33199 130 aa10.67□□□□□ -0.7
CDC50YCR094W RPL17AP05740 184 aaKnown RBP10.65□□□□□ -0.7
CDC50YCR094W RPL17BP46990 184 aaKnown RBP10.65□□□□□ -0.7
CDC50YCR094W REB1P21538 810 aa10.64□□□□□ -0.71
CDC50YCR094W AVT3P36062 692 aa10.62□□□□□ -0.71
CDC50YCR094W CDC27P38042 758 aa10.34□□□□□ -0.75
CDC50YCR094W YKR023WP36119 530 aaKnown RBP10.17□□□□□ -0.78
CDC50YCR094W SPT21P35209 758 aa10.15□□□□□ -0.78
CDC50YCR094W BFR2Q06631 534 aaKnown RBP10.12□□□□□ -0.79
CDC50YCR094W UBP10P53874 792 aaPredicted RBP10.1□□□□□ -0.79
CDC50YCR094W MAP2P38174 421 aaKnown RBP10.07□□□□□ -0.8
CDC50YCR094W BUD31P25337 157 aaPredicted RBP10.02□□□□□ -0.81
CDC50YCR094W HOP09932 586 aa9.96□□□□□ -0.82
CDC50YCR094W TFC8Q12308 588 aa9.96□□□□□ -0.82
CDC50YCR094W DCD1P06773 312 aa9.93□□□□□ -0.82
CDC50YCR094W SCY1P53009 804 aa9.76□□□□□ -0.85
CDC50YCR094W RIM101P33400 625 aa9.68□□□□□ -0.86
CDC50YCR094W SLX5P32828 619 aaKnown RBP9.67□□□□□ -0.86
CDC50YCR094W TIF4632P39936 914 aaKnown RBP9.67□□□□□ -0.86
CDC50YCR094W TGL3P40308 642 aa9.66□□□□□ -0.86
CDC50YCR094W BCH2P36122 765 aa9.61□□□□□ -0.87
CDC50YCR094W UBP9P39967 754 aa9.51□□□□□ -0.89
CDC50YCR094W SIS1P25294 352 aaKnown RBP9.48□□□□□ -0.89
CDC50YCR094W OXP1P28273 1286 aa9.34□□□□□ -0.91
CDC50YCR094W EPS1P40557 701 aa9.33□□□□□ -0.92
CDC50YCR094W BDF1P35817 686 aa9.31□□□□□ -0.92
CDC50YCR094W MST1P07236 462 aa9.2□□□□□ -0.94
CDC50YCR094W PTP3P40048 928 aa9.19□□□□□ -0.94
CDC50YCR094W YIL055CP40523 627 aaKnown RBP9.18□□□□□ -0.94
CDC50YCR094W YBL029C-AQ3E756 94 aa9.13□□□□□ -0.95
CDC50YCR094W YOR238WQ08634 303 aa9.12□□□□□ -0.95
CDC50YCR094W NSR1P27476 414 aaKnown RBP RIP-Chip data9.07□□□□□ -0.96not detected
CDC50YCR094W RSM7P47150 247 aa9.06□□□□□ -0.96
CDC50YCR094W BBC1P47068 1157 aa9.04□□□□□ -0.96
CDC50YCR094W AI2P03876 854 aa9.02□□□□□ -0.97
CDC50YCR094W VNX1P42839 908 aa9.01□□□□□ -0.97
CDC50YCR094W YAP5P40574 245 aa8.98□□□□□ -0.97
CDC50YCR094W YAH1Q12184 172 aaKnown RBP8.97□□□□□ -0.97
CDC50YCR094W SPP1Q03012 353 aa8.92□□□□□ -0.98
CDC50YCR094W WSC3Q12215 556 aa8.9□□□□□ -0.98
CDC50YCR094W TIF11P38912 153 aaKnown RBP8.81□□□□□ -1
CDC50YCR094W YLR271WQ06152 274 aa8.81□□□□□ -1
CDC50YCR094W GTT3P39996 337 aa8.79□□□□□ -1
CDC50YCR094W AIR2Q12476 344 aaKnown RBP8.79□□□□□ -1
CDC50YCR094W FKH1P40466 484 aa8.76□□□□□ -1.01
CDC50YCR094W PSD2P53037 1138 aaKnown RBP8.74□□□□□ -1.01
CDC50YCR094W YJL171CP46992 396 aa8.71□□□□□ -1.02
CDC50YCR094W PIB1Q06651 286 aa8.71□□□□□ -1.02
CDC50YCR094W TFA1P36100 482 aa8.7□□□□□ -1.02
CDC50YCR094W MRM1P25270 412 aa8.67□□□□□ -1.02
CDC50YCR094W ULI1P43604 169 aa8.67□□□□□ -1.02
CDC50YCR094W LDB19Q12502 818 aa8.67□□□□□ -1.02
CDC50YCR094W IOC2Q12072 812 aa8.66□□□□□ -1.02
CDC50YCR094W MSB4Q12317 492 aa8.57□□□□□ -1.04
CDC50YCR094W BMT6Q12291 365 aa8.56□□□□□ -1.04
CDC50YCR094W SSP1P38871 571 aa8.55□□□□□ -1.04
CDC50YCR094W EAP1P36041 632 aaKnown RBP8.53□□□□□ -1.04
CDC50YCR094W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.53□□□□□ -1.04not detected
CDC50YCR094W YOL036WQ08206 761 aa8.51□□□□□ -1.05
CDC50YCR094W VPS29P38759 282 aa8.5□□□□□ -1.05
CDC50YCR094W SET4P42948 560 aa8.5□□□□□ -1.05
CDC50YCR094W YMR1P47147 688 aaKnown RBP RIP-Chip data8.49□□□□□ -1.05not detected
CDC50YCR094W DBP1P24784 617 aaKnown RBP8.48□□□□□ -1.05
CDC50YCR094W TRP5P00931 707 aaKnown RBP8.47□□□□□ -1.05
CDC50YCR094W RTG1P32607 177 aa8.47□□□□□ -1.05
CDC50YCR094W CST9Q06032 482 aa8.47□□□□□ -1.05
CDC50YCR094W YFR006WP43590 535 aa8.46□□□□□ -1.06
CDC50YCR094W RTG3P38165 486 aa8.44□□□□□ -1.06
CDC50YCR094W NCR1Q12200 1170 aa8.43□□□□□ -1.06
CDC50YCR094W VMA1P17255 1071 aaKnown RBP8.42□□□□□ -1.06
CDC50YCR094W STS1P38637 319 aa8.42□□□□□ -1.06
CDC50YCR094W MGA2P40578 1113 aa8.4□□□□□ -1.06
CDC50YCR094W YNL035CP53962 389 aaKnown RBP8.4□□□□□ -1.06
CDC50YCR094W SAM3Q08986 587 aa8.4□□□□□ -1.06
CDC50YCR094W SEC61P32915 480 aa8.38□□□□□ -1.07
CDC50YCR094W RCR1P38212 213 aa8.32□□□□□ -1.08
CDC50YCR094W TFG1P41895 735 aaPredicted RBP8.27□□□□□ -1.09
CDC50YCR094W DAN4P47179 1161 aa8.27□□□□□ -1.09
CDC50YCR094W JIP4Q03361 876 aa8.25□□□□□ -1.09
CDC50YCR094W GYP5Q12344 894 aa8.24□□□□□ -1.09
CDC50YCR094W ABP1P15891 592 aaKnown RBP8.23□□□□□ -1.09
CDC50YCR094W SAP30P38429 201 aa8.23□□□□□ -1.09
CDC50YCR094W YDL129WQ07555 291 aa8.2□□□□□ -1.1
CDC50YCR094W HTA1P04911 132 aaKnown RBP8.19□□□□□ -1.1
CDC50YCR094W HTA2P04912 132 aa8.19□□□□□ -1.1
CDC50YCR094W DCW1P36091 449 aa8.19□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms