Protein–RNA interactions for Protein: Q9HC29

NOD2, Nucleotide-binding oligomerization domain-containing protein 2, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD2Q9HC29 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC34.67■■■■□ 3.14
NOD2Q9HC29 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC34.19■■■■□ 3.06
NOD2Q9HC29 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC33.86■■■■□ 3.01
NOD2Q9HC29 AL356512.1-201ENST00000607453 1739 ntBASIC33.76■■■□□ 2.99
NOD2Q9HC29 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC33.73■■■□□ 2.99
NOD2Q9HC29 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
NOD2Q9HC29 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC33.54■■■□□ 2.96
NOD2Q9HC29 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC33.24■■■□□ 2.91
NOD2Q9HC29 HES6-203ENST00000409160 1600 ntTSL 2 BASIC33.21■■■□□ 2.91
NOD2Q9HC29 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC32.95■■■□□ 2.87
NOD2Q9HC29 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC32.9■■■□□ 2.86
NOD2Q9HC29 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC32.83■■■□□ 2.85
NOD2Q9HC29 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC32.74■■■□□ 2.83
NOD2Q9HC29 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC32.65■■■□□ 2.82
NOD2Q9HC29 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
NOD2Q9HC29 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC32.58■■■□□ 2.81
NOD2Q9HC29 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC32.39■■■□□ 2.78
NOD2Q9HC29 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC32.39■■■□□ 2.78
NOD2Q9HC29 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
NOD2Q9HC29 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
NOD2Q9HC29 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC32.13■■■□□ 2.73
NOD2Q9HC29 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC31.99■■■□□ 2.71
NOD2Q9HC29 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC31.94■■■□□ 2.7
NOD2Q9HC29 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC31.93■■■□□ 2.7
NOD2Q9HC29 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC31.92■■■□□ 2.7
NOD2Q9HC29 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC31.79■■■□□ 2.68
NOD2Q9HC29 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC31.75■■■□□ 2.67
NOD2Q9HC29 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC31.74■■■□□ 2.67
NOD2Q9HC29 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC31.71■■■□□ 2.67
NOD2Q9HC29 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC31.7■■■□□ 2.67
NOD2Q9HC29 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
NOD2Q9HC29 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC31.45■■■□□ 2.63
NOD2Q9HC29 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC31.4■■■□□ 2.62
NOD2Q9HC29 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
NOD2Q9HC29 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC31.4■■■□□ 2.62
NOD2Q9HC29 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
NOD2Q9HC29 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC31.18■■■□□ 2.58
NOD2Q9HC29 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
NOD2Q9HC29 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC31■■■□□ 2.55
NOD2Q9HC29 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
NOD2Q9HC29 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC30.98■■■□□ 2.55
NOD2Q9HC29 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC30.97■■■□□ 2.55
NOD2Q9HC29 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
NOD2Q9HC29 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
NOD2Q9HC29 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC30.97■■■□□ 2.55
NOD2Q9HC29 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC30.95■■■□□ 2.55
NOD2Q9HC29 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
NOD2Q9HC29 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC30.93■■■□□ 2.54
NOD2Q9HC29 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
NOD2Q9HC29 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
NOD2Q9HC29 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC30.82■■■□□ 2.52
NOD2Q9HC29 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC30.81■■■□□ 2.52
NOD2Q9HC29 INO80B-203ENST00000409917 796 ntTSL 2 BASIC30.76■■■□□ 2.51
NOD2Q9HC29 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC30.74■■■□□ 2.51
NOD2Q9HC29 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
NOD2Q9HC29 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
NOD2Q9HC29 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC30.62■■■□□ 2.49
NOD2Q9HC29 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
NOD2Q9HC29 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC30.57■■■□□ 2.48
NOD2Q9HC29 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC30.49■■■□□ 2.47
NOD2Q9HC29 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC30.46■■■□□ 2.47
NOD2Q9HC29 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
NOD2Q9HC29 AC015813.7-201ENST00000623294 581 ntBASIC30.41■■■□□ 2.46
NOD2Q9HC29 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC30.3■■■□□ 2.44
NOD2Q9HC29 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
NOD2Q9HC29 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
NOD2Q9HC29 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
NOD2Q9HC29 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
NOD2Q9HC29 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
NOD2Q9HC29 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC30.13■■■□□ 2.41
NOD2Q9HC29 ILK-212ENST00000532063 1617 ntTSL 2 BASIC30.12■■■□□ 2.41
NOD2Q9HC29 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC30.11■■■□□ 2.41
NOD2Q9HC29 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
NOD2Q9HC29 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC30.09■■■□□ 2.41
NOD2Q9HC29 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC30.06■■■□□ 2.4
NOD2Q9HC29 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
NOD2Q9HC29 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
NOD2Q9HC29 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
NOD2Q9HC29 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC29.95■■■□□ 2.38
NOD2Q9HC29 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC29.94■■■□□ 2.38
NOD2Q9HC29 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
NOD2Q9HC29 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
NOD2Q9HC29 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
NOD2Q9HC29 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC29.91■■■□□ 2.38
NOD2Q9HC29 AC006077.2-201ENST00000623591 457 ntBASIC29.9■■■□□ 2.38
NOD2Q9HC29 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC29.89■■■□□ 2.38
NOD2Q9HC29 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC29.88■■■□□ 2.37
NOD2Q9HC29 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
NOD2Q9HC29 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC29.86■■■□□ 2.37
NOD2Q9HC29 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
NOD2Q9HC29 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
NOD2Q9HC29 ZNRF2P1-201ENST00000441407 443 ntBASIC29.75■■■□□ 2.35
NOD2Q9HC29 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC29.73■■■□□ 2.35
NOD2Q9HC29 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
NOD2Q9HC29 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC29.71■■■□□ 2.35
NOD2Q9HC29 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC29.7■■■□□ 2.34
NOD2Q9HC29 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
NOD2Q9HC29 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
NOD2Q9HC29 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC29.64■■■□□ 2.34
NOD2Q9HC29 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC29.63■■■□□ 2.33
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms