Protein–RNA interactions for Protein: Q96HR8

NAF1, H/ACA ribonucleoprotein complex non-core subunit NAF1, humanhuman

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NAF1Q96HR8 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC33.25■■■□□ 2.91
NAF1Q96HR8 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC32.67■■■□□ 2.82
NAF1Q96HR8 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC32.53■■■□□ 2.8
NAF1Q96HR8 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC32.33■■■□□ 2.77
NAF1Q96HR8 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC32.21■■■□□ 2.75
NAF1Q96HR8 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC32.16■■■□□ 2.74
NAF1Q96HR8 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
NAF1Q96HR8 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC31.95■■■□□ 2.71
NAF1Q96HR8 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
NAF1Q96HR8 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
NAF1Q96HR8 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
NAF1Q96HR8 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC31.36■■■□□ 2.61
NAF1Q96HR8 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC31.33■■■□□ 2.61
NAF1Q96HR8 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC31.22■■■□□ 2.59
NAF1Q96HR8 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC31.19■■■□□ 2.58
NAF1Q96HR8 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
NAF1Q96HR8 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC31.17■■■□□ 2.58
NAF1Q96HR8 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC31.14■■■□□ 2.58
NAF1Q96HR8 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
NAF1Q96HR8 AL356512.1-201ENST00000607453 1739 ntBASIC31.01■■■□□ 2.55
NAF1Q96HR8 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
NAF1Q96HR8 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
NAF1Q96HR8 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC30.86■■■□□ 2.53
NAF1Q96HR8 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC30.8■■■□□ 2.52
NAF1Q96HR8 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC30.78■■■□□ 2.52
NAF1Q96HR8 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
NAF1Q96HR8 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
NAF1Q96HR8 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
NAF1Q96HR8 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC30.45■■■□□ 2.47
NAF1Q96HR8 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC30.44■■■□□ 2.46
NAF1Q96HR8 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC30.44■■■□□ 2.46
NAF1Q96HR8 HES6-203ENST00000409160 1600 ntTSL 2 BASIC30.35■■■□□ 2.45
NAF1Q96HR8 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC30.33■■■□□ 2.45
NAF1Q96HR8 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC30.3■■■□□ 2.44
NAF1Q96HR8 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
NAF1Q96HR8 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
NAF1Q96HR8 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC30.25■■■□□ 2.43
NAF1Q96HR8 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC30.24■■■□□ 2.43
NAF1Q96HR8 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC30.22■■■□□ 2.43
NAF1Q96HR8 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
NAF1Q96HR8 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC30.14■■■□□ 2.42
NAF1Q96HR8 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
NAF1Q96HR8 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC30.05■■■□□ 2.4
NAF1Q96HR8 INO80B-203ENST00000409917 796 ntTSL 2 BASIC30.03■■■□□ 2.4
NAF1Q96HR8 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
NAF1Q96HR8 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC30.01■■■□□ 2.39
NAF1Q96HR8 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
NAF1Q96HR8 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC29.9■■■□□ 2.38
NAF1Q96HR8 ZNRF2P1-201ENST00000441407 443 ntBASIC29.76■■■□□ 2.35
NAF1Q96HR8 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC29.72■■■□□ 2.35
NAF1Q96HR8 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC29.72■■■□□ 2.35
NAF1Q96HR8 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
NAF1Q96HR8 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC29.7■■■□□ 2.35
NAF1Q96HR8 AC006077.2-201ENST00000623591 457 ntBASIC29.7■■■□□ 2.35
NAF1Q96HR8 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
NAF1Q96HR8 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
NAF1Q96HR8 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC29.57■■■□□ 2.32
NAF1Q96HR8 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
NAF1Q96HR8 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC29.56■■■□□ 2.32
NAF1Q96HR8 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
NAF1Q96HR8 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC29.49■■■□□ 2.31
NAF1Q96HR8 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
NAF1Q96HR8 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC29.46■■■□□ 2.31
NAF1Q96HR8 AC015813.7-201ENST00000623294 581 ntBASIC29.44■■■□□ 2.3
NAF1Q96HR8 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
NAF1Q96HR8 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC29.37■■■□□ 2.29
NAF1Q96HR8 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC29.34■■■□□ 2.29
NAF1Q96HR8 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
NAF1Q96HR8 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
NAF1Q96HR8 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC29.21■■■□□ 2.27
NAF1Q96HR8 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC29.2■■■□□ 2.27
NAF1Q96HR8 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
NAF1Q96HR8 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
NAF1Q96HR8 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC29.11■■■□□ 2.25
NAF1Q96HR8 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC29.11■■■□□ 2.25
NAF1Q96HR8 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
NAF1Q96HR8 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC29.09■■■□□ 2.25
NAF1Q96HR8 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
NAF1Q96HR8 AP002365.1-201ENST00000603448 772 ntBASIC29.05■■■□□ 2.24
NAF1Q96HR8 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC29.03■■■□□ 2.24
NAF1Q96HR8 ST7-205ENST00000393446 2114 ntTSL 5 BASIC28.98■■■□□ 2.23
NAF1Q96HR8 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
NAF1Q96HR8 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
NAF1Q96HR8 ST7-202ENST00000323984 2142 ntTSL 5 BASIC28.92■■■□□ 2.22
NAF1Q96HR8 ST7-207ENST00000393449 2127 ntTSL 5 BASIC28.92■■■□□ 2.22
NAF1Q96HR8 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC28.92■■■□□ 2.22
NAF1Q96HR8 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
NAF1Q96HR8 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
NAF1Q96HR8 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC28.91■■■□□ 2.22
NAF1Q96HR8 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
NAF1Q96HR8 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC28.89■■■□□ 2.21
NAF1Q96HR8 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
NAF1Q96HR8 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC28.86■■■□□ 2.21
NAF1Q96HR8 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC28.84■■■□□ 2.21
NAF1Q96HR8 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC28.83■■■□□ 2.21
NAF1Q96HR8 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
NAF1Q96HR8 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC28.82■■■□□ 2.2
NAF1Q96HR8 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC28.82■■■□□ 2.2
NAF1Q96HR8 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
NAF1Q96HR8 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.2
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms