Protein–RNA interactions for Protein: Q8WUY3

PRUNE2, Protein prune homolog 2, humanhuman

Predictions only

Length 3,088 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2Q8WUY3 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC37.2■■■■□ 3.55
PRUNE2Q8WUY3 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC36.94■■■■□ 3.5
PRUNE2Q8WUY3 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC36.55■■■■□ 3.44
PRUNE2Q8WUY3 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC35.95■■■■□ 3.35
PRUNE2Q8WUY3 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC35.93■■■■□ 3.34
PRUNE2Q8WUY3 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC35.9■■■■□ 3.34
PRUNE2Q8WUY3 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC35.81■■■■□ 3.32
PRUNE2Q8WUY3 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC35.46■■■■□ 3.27
PRUNE2Q8WUY3 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC35.42■■■■□ 3.26
PRUNE2Q8WUY3 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC35.42■■■■□ 3.26
PRUNE2Q8WUY3 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC35.36■■■■□ 3.25
PRUNE2Q8WUY3 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC35.36■■■■□ 3.25
PRUNE2Q8WUY3 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC35.11■■■■□ 3.21
PRUNE2Q8WUY3 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC35.03■■■■□ 3.2
PRUNE2Q8WUY3 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
PRUNE2Q8WUY3 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
PRUNE2Q8WUY3 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC34.85■■■■□ 3.17
PRUNE2Q8WUY3 AL356512.1-201ENST00000607453 1739 ntBASIC34.53■■■■□ 3.12
PRUNE2Q8WUY3 AC006077.2-201ENST00000623591 457 ntBASIC34.44■■■■□ 3.1
PRUNE2Q8WUY3 ZNRF2P1-201ENST00000441407 443 ntBASIC34.36■■■■□ 3.09
PRUNE2Q8WUY3 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC34.35■■■■□ 3.09
PRUNE2Q8WUY3 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC34.34■■■■□ 3.09
PRUNE2Q8WUY3 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
PRUNE2Q8WUY3 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC34.29■■■■□ 3.08
PRUNE2Q8WUY3 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC34.26■■■■□ 3.08
PRUNE2Q8WUY3 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC34.26■■■■□ 3.07
PRUNE2Q8WUY3 INO80B-203ENST00000409917 796 ntTSL 2 BASIC34.22■■■■□ 3.07
PRUNE2Q8WUY3 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC34.17■■■■□ 3.06
PRUNE2Q8WUY3 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC34.07■■■■□ 3.04
PRUNE2Q8WUY3 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC34■■■■□ 3.03
PRUNE2Q8WUY3 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC33.76■■■■□ 3
PRUNE2Q8WUY3 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC33.64■■■□□ 2.97
PRUNE2Q8WUY3 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC33.62■■■□□ 2.97
PRUNE2Q8WUY3 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC33.61■■■□□ 2.97
PRUNE2Q8WUY3 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC33.59■■■□□ 2.97
PRUNE2Q8WUY3 AP002365.1-201ENST00000603448 772 ntBASIC33.49■■■□□ 2.95
PRUNE2Q8WUY3 AC015813.7-201ENST00000623294 581 ntBASIC33.42■■■□□ 2.94
PRUNE2Q8WUY3 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC33.34■■■□□ 2.93
PRUNE2Q8WUY3 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC33.34■■■□□ 2.93
PRUNE2Q8WUY3 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC33.31■■■□□ 2.92
PRUNE2Q8WUY3 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC33.29■■■□□ 2.92
PRUNE2Q8WUY3 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC33.29■■■□□ 2.92
PRUNE2Q8WUY3 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC33.15■■■□□ 2.9
PRUNE2Q8WUY3 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC33.1■■■□□ 2.89
PRUNE2Q8WUY3 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC33.09■■■□□ 2.89
PRUNE2Q8WUY3 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC33.06■■■□□ 2.88
PRUNE2Q8WUY3 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
PRUNE2Q8WUY3 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
PRUNE2Q8WUY3 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
PRUNE2Q8WUY3 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC32.79■■■□□ 2.84
PRUNE2Q8WUY3 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
PRUNE2Q8WUY3 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC32.79■■■□□ 2.84
PRUNE2Q8WUY3 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC32.76■■■□□ 2.83
PRUNE2Q8WUY3 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC32.75■■■□□ 2.83
PRUNE2Q8WUY3 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
PRUNE2Q8WUY3 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC32.73■■■□□ 2.83
PRUNE2Q8WUY3 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
PRUNE2Q8WUY3 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC32.66■■■□□ 2.82
PRUNE2Q8WUY3 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC32.64■■■□□ 2.82
PRUNE2Q8WUY3 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC32.63■■■□□ 2.81
PRUNE2Q8WUY3 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC32.62■■■□□ 2.81
PRUNE2Q8WUY3 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC32.58■■■□□ 2.81
PRUNE2Q8WUY3 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC32.54■■■□□ 2.8
PRUNE2Q8WUY3 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC32.54■■■□□ 2.8
PRUNE2Q8WUY3 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
PRUNE2Q8WUY3 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC32.52■■■□□ 2.8
PRUNE2Q8WUY3 HES6-203ENST00000409160 1600 ntTSL 2 BASIC32.5■■■□□ 2.79
PRUNE2Q8WUY3 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
PRUNE2Q8WUY3 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC32.49■■■□□ 2.79
PRUNE2Q8WUY3 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
PRUNE2Q8WUY3 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
PRUNE2Q8WUY3 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC32.47■■■□□ 2.79
PRUNE2Q8WUY3 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC32.45■■■□□ 2.79
PRUNE2Q8WUY3 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
PRUNE2Q8WUY3 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
PRUNE2Q8WUY3 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC32.3■■■□□ 2.76
PRUNE2Q8WUY3 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
PRUNE2Q8WUY3 DYNLL1-208ENST00000550178 581 ntBASIC32.3■■■□□ 2.76
PRUNE2Q8WUY3 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC32.3■■■□□ 2.76
PRUNE2Q8WUY3 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC32.3■■■□□ 2.76
PRUNE2Q8WUY3 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC32.28■■■□□ 2.76
PRUNE2Q8WUY3 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC32.28■■■□□ 2.76
PRUNE2Q8WUY3 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC32.27■■■□□ 2.76
PRUNE2Q8WUY3 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC32.26■■■□□ 2.76
PRUNE2Q8WUY3 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC32.25■■■□□ 2.75
PRUNE2Q8WUY3 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC32.24■■■□□ 2.75
PRUNE2Q8WUY3 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC32.23■■■□□ 2.75
PRUNE2Q8WUY3 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
PRUNE2Q8WUY3 RPS2P35-201ENST00000443417 897 ntBASIC32.17■■■□□ 2.74
PRUNE2Q8WUY3 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC32.15■■■□□ 2.74
PRUNE2Q8WUY3 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
PRUNE2Q8WUY3 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
PRUNE2Q8WUY3 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
PRUNE2Q8WUY3 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
PRUNE2Q8WUY3 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC32.03■■■□□ 2.72
PRUNE2Q8WUY3 AC136428.2-201ENST00000563187 214 ntBASIC31.98■■■□□ 2.71
PRUNE2Q8WUY3 RARRES2P7-201ENST00000567349 469 ntBASIC31.98■■■□□ 2.71
PRUNE2Q8WUY3 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC31.93■■■□□ 2.7
PRUNE2Q8WUY3 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC31.93■■■□□ 2.7
PRUNE2Q8WUY3 SUZ12P1-203ENST00000578195 985 ntBASIC31.92■■■□□ 2.7
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms