Protein–RNA interactions for Protein: P18545

PDE6G, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma, humanhuman

Predictions only

Length 87 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6GP18545 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
PDE6GP18545 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
PDE6GP18545 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PDE6GP18545 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC20.72■□□□□ 0.91
PDE6GP18545 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
PDE6GP18545 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDE6GP18545 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDE6GP18545 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDE6GP18545 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC20.13■□□□□ 0.81
PDE6GP18545 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDE6GP18545 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC19.94■□□□□ 0.78
PDE6GP18545 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDE6GP18545 HES6-203ENST00000409160 1600 ntTSL 2 BASIC19.89■□□□□ 0.77
PDE6GP18545 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
PDE6GP18545 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDE6GP18545 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
PDE6GP18545 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC19.54■□□□□ 0.72
PDE6GP18545 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PDE6GP18545 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
PDE6GP18545 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDE6GP18545 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDE6GP18545 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDE6GP18545 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC19.3■□□□□ 0.68
PDE6GP18545 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
PDE6GP18545 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDE6GP18545 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PDE6GP18545 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDE6GP18545 AL356512.1-201ENST00000607453 1739 ntBASIC19.23■□□□□ 0.67
PDE6GP18545 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDE6GP18545 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC19.23■□□□□ 0.67
PDE6GP18545 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDE6GP18545 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDE6GP18545 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDE6GP18545 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDE6GP18545 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC19■□□□□ 0.63
PDE6GP18545 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDE6GP18545 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDE6GP18545 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDE6GP18545 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDE6GP18545 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDE6GP18545 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PDE6GP18545 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDE6GP18545 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDE6GP18545 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
PDE6GP18545 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PDE6GP18545 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC18.82■□□□□ 0.6
PDE6GP18545 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDE6GP18545 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
PDE6GP18545 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDE6GP18545 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
PDE6GP18545 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PDE6GP18545 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDE6GP18545 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
PDE6GP18545 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDE6GP18545 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
PDE6GP18545 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
PDE6GP18545 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
PDE6GP18545 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDE6GP18545 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDE6GP18545 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDE6GP18545 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDE6GP18545 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDE6GP18545 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
PDE6GP18545 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
PDE6GP18545 ST7-202ENST00000323984 2142 ntTSL 5 BASIC18.51■□□□□ 0.55
PDE6GP18545 ST7-207ENST00000393449 2127 ntTSL 5 BASIC18.51■□□□□ 0.55
PDE6GP18545 ST7-205ENST00000393446 2114 ntTSL 5 BASIC18.5■□□□□ 0.55
PDE6GP18545 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PDE6GP18545 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDE6GP18545 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDE6GP18545 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC18.45■□□□□ 0.54
PDE6GP18545 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PDE6GP18545 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PDE6GP18545 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDE6GP18545 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDE6GP18545 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC18.32■□□□□ 0.52
PDE6GP18545 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDE6GP18545 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PDE6GP18545 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC18.31■□□□□ 0.52
PDE6GP18545 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC18.31■□□□□ 0.52
PDE6GP18545 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDE6GP18545 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDE6GP18545 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
PDE6GP18545 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC18.27■□□□□ 0.51
PDE6GP18545 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
PDE6GP18545 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDE6GP18545 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDE6GP18545 ILK-212ENST00000532063 1617 ntTSL 2 BASIC18.18■□□□□ 0.5
PDE6GP18545 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC18.15■□□□□ 0.5
PDE6GP18545 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDE6GP18545 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDE6GP18545 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDE6GP18545 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PDE6GP18545 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC18.11■□□□□ 0.49
PDE6GP18545 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
PDE6GP18545 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDE6GP18545 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC18.1■□□□□ 0.49
PDE6GP18545 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDE6GP18545 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PDE6GP18545 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 225.8 ms