Protein–RNA interactions for Protein: A0A0C4DH28

TRGV4, T-cell receptor gamma variable 4 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV4A0A0C4DH28 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC24.78■■□□□ 1.56
TRGV4A0A0C4DH28 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
TRGV4A0A0C4DH28 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TRGV4A0A0C4DH28 AL356512.1-201ENST00000607453 1739 ntBASIC23.48■■□□□ 1.35
TRGV4A0A0C4DH28 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
TRGV4A0A0C4DH28 HES6-203ENST00000409160 1600 ntTSL 2 BASIC23.26■■□□□ 1.31
TRGV4A0A0C4DH28 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TRGV4A0A0C4DH28 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TRGV4A0A0C4DH28 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC23.11■■□□□ 1.29
TRGV4A0A0C4DH28 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC23.01■■□□□ 1.27
TRGV4A0A0C4DH28 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC22.87■■□□□ 1.25
TRGV4A0A0C4DH28 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC22.85■■□□□ 1.25
TRGV4A0A0C4DH28 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC22.79■■□□□ 1.24
TRGV4A0A0C4DH28 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRGV4A0A0C4DH28 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC22.49■■□□□ 1.19
TRGV4A0A0C4DH28 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
TRGV4A0A0C4DH28 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
TRGV4A0A0C4DH28 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC22.29■■□□□ 1.16
TRGV4A0A0C4DH28 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
TRGV4A0A0C4DH28 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC22.15■■□□□ 1.14
TRGV4A0A0C4DH28 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC22.09■■□□□ 1.13
TRGV4A0A0C4DH28 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC22.07■■□□□ 1.12
TRGV4A0A0C4DH28 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
TRGV4A0A0C4DH28 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
TRGV4A0A0C4DH28 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
TRGV4A0A0C4DH28 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
TRGV4A0A0C4DH28 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC21.95■■□□□ 1.1
TRGV4A0A0C4DH28 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
TRGV4A0A0C4DH28 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TRGV4A0A0C4DH28 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC21.83■■□□□ 1.09
TRGV4A0A0C4DH28 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRGV4A0A0C4DH28 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TRGV4A0A0C4DH28 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
TRGV4A0A0C4DH28 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TRGV4A0A0C4DH28 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
TRGV4A0A0C4DH28 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRGV4A0A0C4DH28 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRGV4A0A0C4DH28 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
TRGV4A0A0C4DH28 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC21.56■■□□□ 1.04
TRGV4A0A0C4DH28 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRGV4A0A0C4DH28 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRGV4A0A0C4DH28 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRGV4A0A0C4DH28 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC21.44■■□□□ 1.02
TRGV4A0A0C4DH28 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRGV4A0A0C4DH28 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
TRGV4A0A0C4DH28 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRGV4A0A0C4DH28 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRGV4A0A0C4DH28 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRGV4A0A0C4DH28 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRGV4A0A0C4DH28 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
TRGV4A0A0C4DH28 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRGV4A0A0C4DH28 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC21.19■□□□□ 0.98
TRGV4A0A0C4DH28 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC21.18■□□□□ 0.98
TRGV4A0A0C4DH28 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TRGV4A0A0C4DH28 ILK-212ENST00000532063 1617 ntTSL 2 BASIC21.17■□□□□ 0.98
TRGV4A0A0C4DH28 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRGV4A0A0C4DH28 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
TRGV4A0A0C4DH28 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRGV4A0A0C4DH28 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
TRGV4A0A0C4DH28 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC21.1■□□□□ 0.97
TRGV4A0A0C4DH28 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
TRGV4A0A0C4DH28 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRGV4A0A0C4DH28 INO80B-203ENST00000409917 796 ntTSL 2 BASIC21.06■□□□□ 0.96
TRGV4A0A0C4DH28 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRGV4A0A0C4DH28 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TRGV4A0A0C4DH28 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TRGV4A0A0C4DH28 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC21.02■□□□□ 0.96
TRGV4A0A0C4DH28 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRGV4A0A0C4DH28 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
TRGV4A0A0C4DH28 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRGV4A0A0C4DH28 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRGV4A0A0C4DH28 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRGV4A0A0C4DH28 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC20.92■□□□□ 0.94
TRGV4A0A0C4DH28 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRGV4A0A0C4DH28 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRGV4A0A0C4DH28 AC015813.7-201ENST00000623294 581 ntBASIC20.86■□□□□ 0.93
TRGV4A0A0C4DH28 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRGV4A0A0C4DH28 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRGV4A0A0C4DH28 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
TRGV4A0A0C4DH28 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRGV4A0A0C4DH28 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC20.79■□□□□ 0.92
TRGV4A0A0C4DH28 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
TRGV4A0A0C4DH28 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TRGV4A0A0C4DH28 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC20.75■□□□□ 0.91
TRGV4A0A0C4DH28 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRGV4A0A0C4DH28 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRGV4A0A0C4DH28 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
TRGV4A0A0C4DH28 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRGV4A0A0C4DH28 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
TRGV4A0A0C4DH28 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRGV4A0A0C4DH28 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
TRGV4A0A0C4DH28 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRGV4A0A0C4DH28 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRGV4A0A0C4DH28 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRGV4A0A0C4DH28 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC20.6■□□□□ 0.89
TRGV4A0A0C4DH28 AC145285.7-201ENST00000614819 1539 ntBASIC20.59■□□□□ 0.89
TRGV4A0A0C4DH28 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TRGV4A0A0C4DH28 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TRGV4A0A0C4DH28 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
TRGV4A0A0C4DH28 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms