Protein–RNA interactions for Protein: A0A075B6U4

TRAV7, T-cell receptor alpha variable 7 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV7A0A075B6U4 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
TRAV7A0A075B6U4 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
TRAV7A0A075B6U4 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
TRAV7A0A075B6U4 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAV7A0A075B6U4 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRAV7A0A075B6U4 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC19.85■□□□□ 0.77
TRAV7A0A075B6U4 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV7A0A075B6U4 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV7A0A075B6U4 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC19.7■□□□□ 0.74
TRAV7A0A075B6U4 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAV7A0A075B6U4 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
TRAV7A0A075B6U4 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV7A0A075B6U4 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV7A0A075B6U4 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV7A0A075B6U4 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC19.01■□□□□ 0.63
TRAV7A0A075B6U4 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV7A0A075B6U4 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV7A0A075B6U4 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
TRAV7A0A075B6U4 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV7A0A075B6U4 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV7A0A075B6U4 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV7A0A075B6U4 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV7A0A075B6U4 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV7A0A075B6U4 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
TRAV7A0A075B6U4 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV7A0A075B6U4 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV7A0A075B6U4 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
TRAV7A0A075B6U4 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC18.47■□□□□ 0.55
TRAV7A0A075B6U4 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
TRAV7A0A075B6U4 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
TRAV7A0A075B6U4 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV7A0A075B6U4 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
TRAV7A0A075B6U4 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
TRAV7A0A075B6U4 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV7A0A075B6U4 ST7-202ENST00000323984 2142 ntTSL 5 BASIC18.33■□□□□ 0.52
TRAV7A0A075B6U4 ST7-205ENST00000393446 2114 ntTSL 5 BASIC18.33■□□□□ 0.52
TRAV7A0A075B6U4 ST7-207ENST00000393449 2127 ntTSL 5 BASIC18.33■□□□□ 0.52
TRAV7A0A075B6U4 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV7A0A075B6U4 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV7A0A075B6U4 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV7A0A075B6U4 HES6-203ENST00000409160 1600 ntTSL 2 BASIC18.27■□□□□ 0.52
TRAV7A0A075B6U4 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV7A0A075B6U4 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV7A0A075B6U4 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV7A0A075B6U4 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV7A0A075B6U4 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
TRAV7A0A075B6U4 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV7A0A075B6U4 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV7A0A075B6U4 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV7A0A075B6U4 AL161658.1-201ENST00000623641 1967 ntBASIC18.14■□□□□ 0.49
TRAV7A0A075B6U4 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC18.1■□□□□ 0.49
TRAV7A0A075B6U4 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV7A0A075B6U4 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV7A0A075B6U4 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV7A0A075B6U4 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV7A0A075B6U4 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV7A0A075B6U4 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV7A0A075B6U4 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV7A0A075B6U4 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV7A0A075B6U4 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV7A0A075B6U4 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC17.98■□□□□ 0.47
TRAV7A0A075B6U4 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV7A0A075B6U4 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV7A0A075B6U4 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV7A0A075B6U4 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV7A0A075B6U4 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
TRAV7A0A075B6U4 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC17.9■□□□□ 0.46
TRAV7A0A075B6U4 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV7A0A075B6U4 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV7A0A075B6U4 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV7A0A075B6U4 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV7A0A075B6U4 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV7A0A075B6U4 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC17.8■□□□□ 0.44
TRAV7A0A075B6U4 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV7A0A075B6U4 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV7A0A075B6U4 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC17.73■□□□□ 0.43
TRAV7A0A075B6U4 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV7A0A075B6U4 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
TRAV7A0A075B6U4 AC139426.1-201ENST00000568218 2529 ntBASIC17.69■□□□□ 0.42
TRAV7A0A075B6U4 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV7A0A075B6U4 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV7A0A075B6U4 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC17.66■□□□□ 0.42
TRAV7A0A075B6U4 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV7A0A075B6U4 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TRAV7A0A075B6U4 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
TRAV7A0A075B6U4 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV7A0A075B6U4 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC17.59■□□□□ 0.41
TRAV7A0A075B6U4 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.41
TRAV7A0A075B6U4 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRAV7A0A075B6U4 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV7A0A075B6U4 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TRAV7A0A075B6U4 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TRAV7A0A075B6U4 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV7A0A075B6U4 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
TRAV7A0A075B6U4 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV7A0A075B6U4 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC17.44■□□□□ 0.38
TRAV7A0A075B6U4 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV7A0A075B6U4 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV7A0A075B6U4 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV7A0A075B6U4 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms