Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
PDS5AQ29RF7 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
PDS5AQ29RF7 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC30.92■■■□□ 2.54
PDS5AQ29RF7 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
PDS5AQ29RF7 TPT1-202ENST00000379055 948 ntTSL 2 BASIC30.92■■■□□ 2.54
PDS5AQ29RF7 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC30.92■■■□□ 2.54
PDS5AQ29RF7 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC30.92■■■□□ 2.54
PDS5AQ29RF7 BRD4-212ENST00000630599 726 ntTSL 2 BASIC30.92■■■□□ 2.54
PDS5AQ29RF7 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC30.91■■■□□ 2.54
PDS5AQ29RF7 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
PDS5AQ29RF7 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
PDS5AQ29RF7 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC30.9■■■□□ 2.54
PDS5AQ29RF7 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC30.9■■■□□ 2.54
PDS5AQ29RF7 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
PDS5AQ29RF7 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC30.89■■■□□ 2.54
PDS5AQ29RF7 ST7-202ENST00000323984 2142 ntTSL 5 BASIC30.89■■■□□ 2.54
PDS5AQ29RF7 ST7-207ENST00000393449 2127 ntTSL 5 BASIC30.89■■■□□ 2.54
PDS5AQ29RF7 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
PDS5AQ29RF7 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC30.89■■■□□ 2.54
PDS5AQ29RF7 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC30.89■■■□□ 2.54
PDS5AQ29RF7 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
PDS5AQ29RF7 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC30.89■■■□□ 2.54
PDS5AQ29RF7 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
PDS5AQ29RF7 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC30.88■■■□□ 2.53
PDS5AQ29RF7 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
PDS5AQ29RF7 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
PDS5AQ29RF7 AL139393.2-201ENST00000608721 2025 ntBASIC30.88■■■□□ 2.53
PDS5AQ29RF7 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC30.87■■■□□ 2.53
PDS5AQ29RF7 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
PDS5AQ29RF7 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC30.87■■■□□ 2.53
PDS5AQ29RF7 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
PDS5AQ29RF7 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC30.87■■■□□ 2.53
PDS5AQ29RF7 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
PDS5AQ29RF7 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
PDS5AQ29RF7 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC30.85■■■□□ 2.53
PDS5AQ29RF7 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC30.85■■■□□ 2.53
PDS5AQ29RF7 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC30.84■■■□□ 2.53
PDS5AQ29RF7 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
PDS5AQ29RF7 GPX1-201ENST00000419349 1106 ntBASIC30.84■■■□□ 2.53
PDS5AQ29RF7 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
PDS5AQ29RF7 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
PDS5AQ29RF7 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC30.84■■■□□ 2.53
PDS5AQ29RF7 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
PDS5AQ29RF7 AC100797.4-201ENST00000631653 1827 ntBASIC30.84■■■□□ 2.53
PDS5AQ29RF7 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
PDS5AQ29RF7 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC30.83■■■□□ 2.53
PDS5AQ29RF7 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
PDS5AQ29RF7 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
PDS5AQ29RF7 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
PDS5AQ29RF7 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
PDS5AQ29RF7 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC30.82■■■□□ 2.52
PDS5AQ29RF7 MIR219A2-201ENST00000608502 1504 ntBASIC30.81■■■□□ 2.52
PDS5AQ29RF7 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC30.81■■■□□ 2.52
PDS5AQ29RF7 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC30.8■■■□□ 2.52
PDS5AQ29RF7 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
PDS5AQ29RF7 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC30.79■■■□□ 2.52
PDS5AQ29RF7 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC30.79■■■□□ 2.52
PDS5AQ29RF7 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
PDS5AQ29RF7 RNF126P1-201ENST00000567452 1320 ntBASIC30.78■■■□□ 2.52
PDS5AQ29RF7 RARRES2P2-201ENST00000394842 485 ntBASIC30.77■■■□□ 2.52
PDS5AQ29RF7 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
PDS5AQ29RF7 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC30.77■■■□□ 2.52
PDS5AQ29RF7 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
PDS5AQ29RF7 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC30.76■■■□□ 2.52
PDS5AQ29RF7 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC30.76■■■□□ 2.52
PDS5AQ29RF7 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
PDS5AQ29RF7 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC30.76■■■□□ 2.51
PDS5AQ29RF7 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC30.76■■■□□ 2.51
PDS5AQ29RF7 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC30.75■■■□□ 2.51
PDS5AQ29RF7 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC30.74■■■□□ 2.51
PDS5AQ29RF7 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
PDS5AQ29RF7 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC30.74■■■□□ 2.51
PDS5AQ29RF7 CEP120-209ENST00000515110 606 ntTSL 3 BASIC30.73■■■□□ 2.51
PDS5AQ29RF7 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC30.73■■■□□ 2.51
PDS5AQ29RF7 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
PDS5AQ29RF7 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
PDS5AQ29RF7 AC022413.1-201ENST00000624602 984 ntBASIC30.73■■■□□ 2.51
PDS5AQ29RF7 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
PDS5AQ29RF7 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
PDS5AQ29RF7 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC30.72■■■□□ 2.51
PDS5AQ29RF7 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC30.72■■■□□ 2.51
PDS5AQ29RF7 ABCB10P1-201ENST00000614297 2181 ntBASIC30.71■■■□□ 2.51
PDS5AQ29RF7 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
PDS5AQ29RF7 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC30.71■■■□□ 2.51
PDS5AQ29RF7 AC060814.1-201ENST00000554326 538 ntBASIC30.71■■■□□ 2.51
PDS5AQ29RF7 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC30.7■■■□□ 2.51
PDS5AQ29RF7 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC30.7■■■□□ 2.5
PDS5AQ29RF7 HES4-202ENST00000428771 1040 ntTSL 2 BASIC30.69■■■□□ 2.5
PDS5AQ29RF7 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
PDS5AQ29RF7 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
PDS5AQ29RF7 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC30.68■■■□□ 2.5
PDS5AQ29RF7 ABCB10P3-201ENST00000561950 2166 ntBASIC30.68■■■□□ 2.5
PDS5AQ29RF7 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
PDS5AQ29RF7 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
PDS5AQ29RF7 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
PDS5AQ29RF7 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC30.66■■■□□ 2.5
PDS5AQ29RF7 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC30.65■■■□□ 2.5
PDS5AQ29RF7 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
PDS5AQ29RF7 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
PDS5AQ29RF7 AP002414.2-202ENST00000590929 1450 ntBASIC30.63■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms