RNA–Protein interactions for RNA: ENST00000369017.5

NSMCE4A-201, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 1 (best) BASIC

Gene NSMCE4A, Length 1,224 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-201ENST00000369017 NISCHQ9Y2I1 1504 aa59.17■■■■■ 7.06
NSMCE4A-201ENST00000369017 CCDC180Q9P1Z9 1646 aa52.3■■■■■ 5.96
NSMCE4A-201ENST00000369017 ABCC9O60706 1549 aa50.22■■■■■ 5.63
NSMCE4A-201ENST00000369017 ZCCHC6Q5VYS8 1495 aaKnown RBP49.45■■■■■ 5.51
NSMCE4A-201ENST00000369017 DCAF8L2P0C7V8 631 aa49.13■■■■■ 5.46
NSMCE4A-201ENST00000369017 DCAF1Q9Y4B6 1507 aa49.09■■■■■ 5.45
NSMCE4A-201ENST00000369017 MYO15BQ96JP2 1530 aa49■■■■■ 5.43
NSMCE4A-201ENST00000369017 NACADO15069 1562 aa48.99■■■■■ 5.43
NSMCE4A-201ENST00000369017 RB1CC1Q8TDY2 1594 aa48.84■■■■■ 5.41
NSMCE4A-201ENST00000369017 SCRIBQ14160 1630 aa47.67■■■■■ 5.22
NSMCE4A-201ENST00000369017 UNC13AQ9UPW8 1703 aa47.58■■■■■ 5.21
NSMCE4A-201ENST00000369017 SHROOM4Q9ULL8 1493 aa47.16■■■■■ 5.14
NSMCE4A-201ENST00000369017 BICRAQ9NZM4 1560 aa47.13■■■■■ 5.14
NSMCE4A-201ENST00000369017 PABPN1Q86U42 306 aaKnown RBP eCLIP47.04■■■■■ 5.12
NSMCE4A-201ENST00000369017 EIF4G1Q04637 1599 aaKnown RBP45.91■■■■■ 4.94
NSMCE4A-201ENST00000369017 BAZ1AQ9NRL2 1556 aaPredicted RBP45.88■■■■■ 4.93
NSMCE4A-201ENST00000369017 CECR2Q9BXF3 1484 aa45.87■■■■■ 4.93
NSMCE4A-201ENST00000369017 SMARCA4P51532 1647 aa45.72■■■■■ 4.91
NSMCE4A-201ENST00000369017 MROH2BQ7Z745 1585 aa45.54■■■■■ 4.88
NSMCE4A-201ENST00000369017 CC2D2AQ9P2K1 1620 aa45.49■■■■■ 4.87
NSMCE4A-201ENST00000369017 RSF1Q96T23 1441 aaPredicted RBP45.36■■■■■ 4.85
NSMCE4A-201ENST00000369017 SMARCA2P51531 1590 aa45.35■■■■■ 4.85
NSMCE4A-201ENST00000369017 PEG3Q9GZU2 1588 aa45.3■■■■■ 4.84
NSMCE4A-201ENST00000369017 ATAD2BQ9ULI0 1458 aa45.25■■■■■ 4.83
NSMCE4A-201ENST00000369017 DNAJC5BQ9UF47 199 aa45.16■■■■■ 4.82
NSMCE4A-201ENST00000369017 NCAPD3P42695 1498 aa45.14■■■■■ 4.82
NSMCE4A-201ENST00000369017 WIZO95785 1651 aa45.1■■■■■ 4.81
NSMCE4A-201ENST00000369017 HMGXB3Q12766 1538 aa45.02■■■■■ 4.8
NSMCE4A-201ENST00000369017 BAZ1BQ9UIG0 1483 aaKnown RBP44.99■■■■■ 4.79
NSMCE4A-201ENST00000369017 SUPT5HO00267 1087 aaKnown RBP44.91■■■■■ 4.78
NSMCE4A-201ENST00000369017 TOP2AP11388 1531 aaKnown RBP44.75■■■■■ 4.76
NSMCE4A-201ENST00000369017 CCDC88BA6NC98 1476 aa44.18■■■■■ 4.66
NSMCE4A-201ENST00000369017 CADPSQ9ULU8 1353 aa43.88■■■■■ 4.61
NSMCE4A-201ENST00000369017 LAMC3Q9Y6N6 1575 aa43.87■■■■■ 4.61
NSMCE4A-201ENST00000369017 CFTRP13569 1480 aa43.78■■■■■ 4.6
NSMCE4A-201ENST00000369017 NESP48681 1621 aa43.65■■■■■ 4.58
NSMCE4A-201ENST00000369017 PDS5BQ9NTI5 1447 aa43.57■■■■■ 4.57
NSMCE4A-201ENST00000369017 PRDM2Q13029 1718 aa43.57■■■■■ 4.57
NSMCE4A-201ENST00000369017 FANCD2Q9BXW9 1451 aa43.36■■■■■ 4.53
NSMCE4A-201ENST00000369017 ERCC6Q03468 1493 aa43.35■■■■■ 4.53
NSMCE4A-201ENST00000369017 CEP164Q9UPV0 1460 aa43.26■■■■■ 4.52
NSMCE4A-201ENST00000369017 KIF21AQ7Z4S6 1674 aa43.23■■■■■ 4.51
NSMCE4A-201ENST00000369017 MRC2Q9UBG0 1479 aa43■■■■■ 4.47
NSMCE4A-201ENST00000369017 ABCC8Q09428 1581 aa42.97■■■■■ 4.47
NSMCE4A-201ENST00000369017 THOC2Q8NI27 1593 aaKnown RBP42.86■■■■■ 4.45
NSMCE4A-201ENST00000369017 WRNQ14191 1432 aaPredicted RBP eCLIP42.83■■■■■ 4.45
NSMCE4A-201ENST00000369017 DNMBPQ6XZF7 1577 aa42.81■■■■■ 4.44
NSMCE4A-201ENST00000369017 WDR62O43379 1518 aa42.79■■■■■ 4.44
NSMCE4A-201ENST00000369017 URB2Q14146 1524 aaKnown RBP42.79■■■■■ 4.44
NSMCE4A-201ENST00000369017 TOPBP1Q92547 1522 aa42.74■■■■■ 4.43
NSMCE4A-201ENST00000369017 CUX1P39880 1505 aa42.68■■■■■ 4.42
NSMCE4A-201ENST00000369017 TOP2BQ02880 1626 aa42.63■■■■■ 4.41
NSMCE4A-201ENST00000369017 BIVM-ERCC5R4GMW8 1640 aa42.61■■■■■ 4.41
NSMCE4A-201ENST00000369017 CUX2O14529 1486 aa42.58■■■■■ 4.41
NSMCE4A-201ENST00000369017 SYNJ1O43426 1573 aa42.56■■■■■ 4.4
NSMCE4A-201ENST00000369017 TRIM41Q8WV44 630 aa42.48■■■■■ 4.39
NSMCE4A-201ENST00000369017 FGD5Q6ZNL6 1462 aa42.45■■■■■ 4.39
NSMCE4A-201ENST00000369017 POLA1P09884 1462 aaPredicted RBP42.42■■■■■ 4.38
NSMCE4A-201ENST00000369017 CHIC1Q5VXU3 224 aa42.39■■■■■ 4.38
NSMCE4A-201ENST00000369017 SOGA1O94964 1423 aa42.33■■■■■ 4.37
NSMCE4A-201ENST00000369017 IFT140Q96RY7 1462 aa42.33■■■■■ 4.37
NSMCE4A-201ENST00000369017 TARBP1Q13395 1621 aaKnown RBP42.17■■■■■ 4.34
NSMCE4A-201ENST00000369017 RAD54L2Q9Y4B4 1467 aa42.17■■■■■ 4.34
NSMCE4A-201ENST00000369017 ABCA10Q8WWZ4 1543 aa42.12■■■■■ 4.33
NSMCE4A-201ENST00000369017 WDR97A6NE52 1622 aa42.07■■■■■ 4.33
NSMCE4A-201ENST00000369017 KIF27Q86VH2 1401 aa41.93■■■■■ 4.3
NSMCE4A-201ENST00000369017 ZNF608Q9ULD9 1512 aaPredicted RBP41.9■■■■■ 4.3
NSMCE4A-201ENST00000369017 TDRD9Q8NDG6 1382 aaKnown RBP41.9■■■■■ 4.3
NSMCE4A-201ENST00000369017 EIF4G3O43432 1585 aaKnown RBP41.86■■■■■ 4.29
NSMCE4A-201ENST00000369017 GAPVD1Q14C86 1478 aa41.85■■■■■ 4.29
NSMCE4A-201ENST00000369017 ABCA5Q8WWZ7 1642 aa41.83■■■■■ 4.29
NSMCE4A-201ENST00000369017 AQRO60306 1485 aaKnown RBP eCLIP41.82■■■■■ 4.295e-9■■□□□ 12.2
NSMCE4A-201ENST00000369017 EEA1Q15075 1411 aa41.78■■■■■ 4.28
NSMCE4A-201ENST00000369017 GRIN2BQ13224 1484 aa41.75■■■■■ 4.27
NSMCE4A-201ENST00000369017 ERICH3Q5RHP9 1530 aa41.69■■■■■ 4.26
NSMCE4A-201ENST00000369017 PBRM1Q86U86 1689 aa41.68■■■■■ 4.26
NSMCE4A-201ENST00000369017 MAGI1Q96QZ7 1491 aaPredicted RBP41.57■■■■■ 4.25
NSMCE4A-201ENST00000369017 RUSC2Q8N2Y8 1516 aa41.57■■■■■ 4.25
NSMCE4A-201ENST00000369017 IGF1RP08069 1367 aa41.54■■■■■ 4.24
NSMCE4A-201ENST00000369017 CSRNP3Q8WYN3 585 aa41.5■■■■■ 4.23
NSMCE4A-201ENST00000369017 CUL7Q14999 1698 aa41.49■■■■■ 4.23
NSMCE4A-201ENST00000369017 SNAPC4Q5SXM2 1469 aa41.49■■■■■ 4.23
NSMCE4A-201ENST00000369017 FAM9AQ8IZU1 332 aaPredicted RBP41.43■■■■■ 4.22
NSMCE4A-201ENST00000369017 FHAD1B1AJZ9 1412 aa41.43■■■■■ 4.22
NSMCE4A-201ENST00000369017 CARMIL1Q5VZK9 1371 aa41.37■■■■■ 4.21
NSMCE4A-201ENST00000369017 ADAMTS12P58397 1594 aa41.37■■■■■ 4.21
NSMCE4A-201ENST00000369017 SYNJ2O15056 1496 aa41.36■■■■■ 4.21
NSMCE4A-201ENST00000369017 CHMP7Q8WUX9 453 aaPredicted RBP41.33■■■■■ 4.21
NSMCE4A-201ENST00000369017 FBLN2P98095 1184 aa41.26■■■■■ 4.2
NSMCE4A-201ENST00000369017 RAPGEF2Q9Y4G8 1499 aa41.25■■■■■ 4.19
NSMCE4A-201ENST00000369017 PRXQ9BXM0 1461 aa41.24■■■■■ 4.19
NSMCE4A-201ENST00000369017 GRIN2AQ12879 1464 aa41.17■■■■■ 4.18
NSMCE4A-201ENST00000369017 CHD1O14646 1710 aa41.15■■■■■ 4.18
NSMCE4A-201ENST00000369017 KIF21BO75037 1637 aa41.15■■■■■ 4.18
NSMCE4A-201ENST00000369017 OSCARQ8IYS5 282 aa41.01■■■■■ 4.16
NSMCE4A-201ENST00000369017 GOLGA3Q08378 1498 aa41.01■■■■■ 4.16
NSMCE4A-201ENST00000369017 NUP160Q12769 1436 aa40.93■■■■■ 4.14
NSMCE4A-201ENST00000369017 CEP170Q5SW79 1584 aa40.86■■■■■ 4.13
NSMCE4A-201ENST00000369017 UBTFP17480 764 aaKnown RBP40.85■■■■■ 4.13
NSMCE4A-201ENST00000369017 KIAA0586Q9BVV6 1533 aa40.82■■■■■ 4.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms