Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
RHBDL3P58872 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC30.56■■■□□ 2.48
RHBDL3P58872 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
RHBDL3P58872 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC30.55■■■□□ 2.48
RHBDL3P58872 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
RHBDL3P58872 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
RHBDL3P58872 CEP120-209ENST00000515110 606 ntTSL 3 BASIC30.55■■■□□ 2.48
RHBDL3P58872 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC30.55■■■□□ 2.48
RHBDL3P58872 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
RHBDL3P58872 RNF126P1-201ENST00000567452 1320 ntBASIC30.54■■■□□ 2.48
RHBDL3P58872 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
RHBDL3P58872 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC30.54■■■□□ 2.48
RHBDL3P58872 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC30.54■■■□□ 2.48
RHBDL3P58872 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
RHBDL3P58872 AP004833.2-201ENST00000532228 1454 ntBASIC30.54■■■□□ 2.48
RHBDL3P58872 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
RHBDL3P58872 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC30.54■■■□□ 2.48
RHBDL3P58872 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
RHBDL3P58872 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
RHBDL3P58872 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC30.53■■■□□ 2.48
RHBDL3P58872 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
RHBDL3P58872 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC30.53■■■□□ 2.48
RHBDL3P58872 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC30.52■■■□□ 2.48
RHBDL3P58872 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC30.52■■■□□ 2.48
RHBDL3P58872 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
RHBDL3P58872 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
RHBDL3P58872 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC30.51■■■□□ 2.47
RHBDL3P58872 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC30.51■■■□□ 2.47
RHBDL3P58872 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
RHBDL3P58872 AC022413.1-201ENST00000624602 984 ntBASIC30.51■■■□□ 2.47
RHBDL3P58872 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC30.5■■■□□ 2.47
RHBDL3P58872 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
RHBDL3P58872 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC30.5■■■□□ 2.47
RHBDL3P58872 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC30.49■■■□□ 2.47
RHBDL3P58872 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC30.49■■■□□ 2.47
RHBDL3P58872 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC30.49■■■□□ 2.47
RHBDL3P58872 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC30.48■■■□□ 2.47
RHBDL3P58872 MIR219A2-201ENST00000608502 1504 ntBASIC30.47■■■□□ 2.47
RHBDL3P58872 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
RHBDL3P58872 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
RHBDL3P58872 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC30.47■■■□□ 2.47
RHBDL3P58872 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC30.46■■■□□ 2.47
RHBDL3P58872 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC30.45■■■□□ 2.47
RHBDL3P58872 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
RHBDL3P58872 AC100797.4-201ENST00000631653 1827 ntBASIC30.45■■■□□ 2.46
RHBDL3P58872 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC30.43■■■□□ 2.46
RHBDL3P58872 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC30.43■■■□□ 2.46
RHBDL3P58872 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC30.42■■■□□ 2.46
RHBDL3P58872 ABHD17AP5-201ENST00000580133 923 ntBASIC30.42■■■□□ 2.46
RHBDL3P58872 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
RHBDL3P58872 AC060814.1-201ENST00000554326 538 ntBASIC30.41■■■□□ 2.46
RHBDL3P58872 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC30.41■■■□□ 2.46
RHBDL3P58872 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC30.41■■■□□ 2.46
RHBDL3P58872 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
RHBDL3P58872 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC30.4■■■□□ 2.46
RHBDL3P58872 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC30.4■■■□□ 2.46
RHBDL3P58872 ST7-205ENST00000393446 2114 ntTSL 5 BASIC30.4■■■□□ 2.46
RHBDL3P58872 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
RHBDL3P58872 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
RHBDL3P58872 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC30.39■■■□□ 2.46
RHBDL3P58872 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
RHBDL3P58872 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC30.38■■■□□ 2.45
RHBDL3P58872 AL139393.2-201ENST00000608721 2025 ntBASIC30.37■■■□□ 2.45
RHBDL3P58872 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
RHBDL3P58872 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC30.37■■■□□ 2.45
RHBDL3P58872 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
RHBDL3P58872 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC30.36■■■□□ 2.45
RHBDL3P58872 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC30.35■■■□□ 2.45
RHBDL3P58872 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC30.34■■■□□ 2.45
RHBDL3P58872 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
RHBDL3P58872 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC30.33■■■□□ 2.45
RHBDL3P58872 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
RHBDL3P58872 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
RHBDL3P58872 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC30.32■■■□□ 2.44
RHBDL3P58872 HES4-202ENST00000428771 1040 ntTSL 2 BASIC30.32■■■□□ 2.44
RHBDL3P58872 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
RHBDL3P58872 MED25-210ENST00000612854 801 ntTSL 5 BASIC30.32■■■□□ 2.44
RHBDL3P58872 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
RHBDL3P58872 MED25-214ENST00000622402 642 ntTSL 5 BASIC30.32■■■□□ 2.44
RHBDL3P58872 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
RHBDL3P58872 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
RHBDL3P58872 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC30.31■■■□□ 2.44
RHBDL3P58872 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC30.31■■■□□ 2.44
RHBDL3P58872 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC30.3■■■□□ 2.44
RHBDL3P58872 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
RHBDL3P58872 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC30.29■■■□□ 2.44
RHBDL3P58872 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
RHBDL3P58872 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC30.29■■■□□ 2.44
RHBDL3P58872 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
RHBDL3P58872 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC30.28■■■□□ 2.44
RHBDL3P58872 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
RHBDL3P58872 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC30.28■■■□□ 2.44
RHBDL3P58872 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC30.28■■■□□ 2.44
RHBDL3P58872 ABCB10P1-201ENST00000614297 2181 ntBASIC30.28■■■□□ 2.44
RHBDL3P58872 AC092296.2-201ENST00000589470 999 ntBASIC30.27■■■□□ 2.44
RHBDL3P58872 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC30.25■■■□□ 2.43
RHBDL3P58872 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
RHBDL3P58872 ABCB10P3-201ENST00000561950 2166 ntBASIC30.25■■■□□ 2.43
RHBDL3P58872 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
RHBDL3P58872 ST7-202ENST00000323984 2142 ntTSL 5 BASIC30.23■■■□□ 2.43
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms