Protein–RNA interactions for Protein: A0A140TA62

LOC100653049, Uncharacterized protein, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC100653049A0A140TA62 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
LOC100653049A0A140TA62 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
LOC100653049A0A140TA62 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC24.52■■□□□ 1.52
LOC100653049A0A140TA62 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
LOC100653049A0A140TA62 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
LOC100653049A0A140TA62 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
LOC100653049A0A140TA62 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
LOC100653049A0A140TA62 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
LOC100653049A0A140TA62 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
LOC100653049A0A140TA62 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC24.5■■□□□ 1.51
LOC100653049A0A140TA62 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
LOC100653049A0A140TA62 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC24.49■■□□□ 1.51
LOC100653049A0A140TA62 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
LOC100653049A0A140TA62 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
LOC100653049A0A140TA62 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
LOC100653049A0A140TA62 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
LOC100653049A0A140TA62 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
LOC100653049A0A140TA62 AC091060.1-201ENST00000623524 1766 ntBASIC24.48■■□□□ 1.51
LOC100653049A0A140TA62 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
LOC100653049A0A140TA62 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
LOC100653049A0A140TA62 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
LOC100653049A0A140TA62 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
LOC100653049A0A140TA62 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
LOC100653049A0A140TA62 PKM-204ENST00000449901 2526 ntTSL 2 BASIC24.46■■□□□ 1.51
LOC100653049A0A140TA62 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
LOC100653049A0A140TA62 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
LOC100653049A0A140TA62 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
LOC100653049A0A140TA62 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
LOC100653049A0A140TA62 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
LOC100653049A0A140TA62 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
LOC100653049A0A140TA62 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC24.44■■□□□ 1.5
LOC100653049A0A140TA62 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
LOC100653049A0A140TA62 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
LOC100653049A0A140TA62 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC24.43■■□□□ 1.5
LOC100653049A0A140TA62 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
LOC100653049A0A140TA62 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC24.43■■□□□ 1.5
LOC100653049A0A140TA62 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
LOC100653049A0A140TA62 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC24.43■■□□□ 1.5
LOC100653049A0A140TA62 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
LOC100653049A0A140TA62 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
LOC100653049A0A140TA62 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
LOC100653049A0A140TA62 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
LOC100653049A0A140TA62 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC24.42■■□□□ 1.5
LOC100653049A0A140TA62 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
LOC100653049A0A140TA62 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
LOC100653049A0A140TA62 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
LOC100653049A0A140TA62 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC24.42■■□□□ 1.5
LOC100653049A0A140TA62 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC24.41■■□□□ 1.5
LOC100653049A0A140TA62 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
LOC100653049A0A140TA62 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
LOC100653049A0A140TA62 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
LOC100653049A0A140TA62 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
LOC100653049A0A140TA62 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC24.4■■□□□ 1.5
LOC100653049A0A140TA62 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.5
LOC100653049A0A140TA62 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
LOC100653049A0A140TA62 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC24.39■■□□□ 1.49
LOC100653049A0A140TA62 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
LOC100653049A0A140TA62 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
LOC100653049A0A140TA62 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC24.38■■□□□ 1.49
LOC100653049A0A140TA62 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC24.38■■□□□ 1.49
LOC100653049A0A140TA62 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
LOC100653049A0A140TA62 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC24.38■■□□□ 1.49
LOC100653049A0A140TA62 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC24.38■■□□□ 1.49
LOC100653049A0A140TA62 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
LOC100653049A0A140TA62 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC24.37■■□□□ 1.49
LOC100653049A0A140TA62 AP002414.2-202ENST00000590929 1450 ntBASIC24.37■■□□□ 1.49
LOC100653049A0A140TA62 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
LOC100653049A0A140TA62 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
LOC100653049A0A140TA62 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
LOC100653049A0A140TA62 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
LOC100653049A0A140TA62 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
LOC100653049A0A140TA62 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
LOC100653049A0A140TA62 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
LOC100653049A0A140TA62 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
LOC100653049A0A140TA62 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC24.34■■□□□ 1.49
LOC100653049A0A140TA62 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
LOC100653049A0A140TA62 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC24.33■■□□□ 1.49
LOC100653049A0A140TA62 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
LOC100653049A0A140TA62 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
LOC100653049A0A140TA62 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
LOC100653049A0A140TA62 AC020928.2-201ENST00000588717 2197 ntBASIC24.33■■□□□ 1.48
LOC100653049A0A140TA62 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.48
LOC100653049A0A140TA62 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
LOC100653049A0A140TA62 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC24.32■■□□□ 1.48
LOC100653049A0A140TA62 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC24.32■■□□□ 1.48
LOC100653049A0A140TA62 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
LOC100653049A0A140TA62 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
LOC100653049A0A140TA62 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
LOC100653049A0A140TA62 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC24.31■■□□□ 1.48
LOC100653049A0A140TA62 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
LOC100653049A0A140TA62 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
LOC100653049A0A140TA62 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
LOC100653049A0A140TA62 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
LOC100653049A0A140TA62 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
LOC100653049A0A140TA62 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC24.3■■□□□ 1.48
LOC100653049A0A140TA62 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC24.3■■□□□ 1.48
LOC100653049A0A140TA62 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
LOC100653049A0A140TA62 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
LOC100653049A0A140TA62 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC24.29■■□□□ 1.48
LOC100653049A0A140TA62 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms