RNA–Protein interactions for RNA: ENST00000539099.1

FLT1-202, Transcript of fms related tyrosine kinase 1, humanhuman

TSL 1 (best) BASIC

Gene FLT1, Length 1,911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FLT1-202ENST00000539099 NISCHQ9Y2I1 1504 aa55.05■■■■■ 6.4
FLT1-202ENST00000539099 CCDC180Q9P1Z9 1646 aa47.82■■■■■ 5.25
FLT1-202ENST00000539099 ZCCHC6Q5VYS8 1495 aaKnown RBP46.36■■■■■ 5.01
FLT1-202ENST00000539099 DCAF1Q9Y4B6 1507 aa45.51■■■■■ 4.88
FLT1-202ENST00000539099 DCAF8L2P0C7V8 631 aa45.22■■■■■ 4.83
FLT1-202ENST00000539099 SHROOM4Q9ULL8 1493 aa45.2■■■■■ 4.83
FLT1-202ENST00000539099 ABCC9O60706 1549 aa44.82■■■■■ 4.76
FLT1-202ENST00000539099 MYO15BQ96JP2 1530 aa44.8■■■■■ 4.76
FLT1-202ENST00000539099 NACADO15069 1562 aa44.4■■■■■ 4.7
FLT1-202ENST00000539099 SCRIBQ14160 1630 aa44.06■■■■■ 4.64
FLT1-202ENST00000539099 RB1CC1Q8TDY2 1594 aa43.92■■■■■ 4.62
FLT1-202ENST00000539099 SUPT5HO00267 1087 aaKnown RBP43.65■■■■■ 4.58
FLT1-202ENST00000539099 UNC13AQ9UPW8 1703 aa43.18■■■■■ 4.5
FLT1-202ENST00000539099 RSF1Q96T23 1441 aaPredicted RBP42.86■■■■■ 4.45
FLT1-202ENST00000539099 CECR2Q9BXF3 1484 aa42.77■■■■■ 4.44
FLT1-202ENST00000539099 BICRAQ9NZM4 1560 aa42.66■■■■■ 4.42
FLT1-202ENST00000539099 MROH2BQ7Z745 1585 aa42.58■■■■■ 4.41
FLT1-202ENST00000539099 BAZ1AQ9NRL2 1556 aaPredicted RBP42.47■■■■■ 4.39
FLT1-202ENST00000539099 PABPN1Q86U42 306 aaKnown RBP eCLIP42.32■■■■■ 4.36
FLT1-202ENST00000539099 WIZO95785 1651 aa42.28■■■■■ 4.36
FLT1-202ENST00000539099 SMARCA4P51532 1647 aa42.26■■■■■ 4.35
FLT1-202ENST00000539099 CHIC1Q5VXU3 224 aa42.04■■■■■ 4.32
FLT1-202ENST00000539099 TOP2AP11388 1531 aaKnown RBP41.81■■■■■ 4.28
FLT1-202ENST00000539099 PEG3Q9GZU2 1588 aa41.72■■■■■ 4.27
FLT1-202ENST00000539099 SMARCA2P51531 1590 aa41.46■■■■■ 4.23
FLT1-202ENST00000539099 ATAD2BQ9ULI0 1458 aa41.42■■■■■ 4.22
FLT1-202ENST00000539099 CCDC88BA6NC98 1476 aa41.38■■■■■ 4.22
FLT1-202ENST00000539099 EIF4G1Q04637 1599 aaKnown RBP41.36■■■■■ 4.21
FLT1-202ENST00000539099 BAZ1BQ9UIG0 1483 aaKnown RBP41.2■■■■■ 4.19
FLT1-202ENST00000539099 TRIM41Q8WV44 630 aa40.99■■■■■ 4.15
FLT1-202ENST00000539099 HMGXB3Q12766 1538 aa40.98■■■■■ 4.15
FLT1-202ENST00000539099 NCAPD3P42695 1498 aa40.97■■■■■ 4.15
FLT1-202ENST00000539099 ABCC8Q09428 1581 aa40.7■■■■■ 4.11
FLT1-202ENST00000539099 CC2D2AQ9P2K1 1620 aa40.6■■■■■ 4.09
FLT1-202ENST00000539099 LOC105371045A0A1W2PR82 267 aa40.45■■■■■ 4.07
FLT1-202ENST00000539099 WRNQ14191 1432 aaPredicted RBP eCLIP40.32■■■■■ 4.05
FLT1-202ENST00000539099 FAM9AQ8IZU1 332 aaPredicted RBP40.28■■■■■ 4.04
FLT1-202ENST00000539099 SYNJ1O43426 1573 aa40.21■■■■■ 4.03
FLT1-202ENST00000539099 CFTRP13569 1480 aa40.2■■■■■ 4.03
FLT1-202ENST00000539099 PRDM2Q13029 1718 aa40.1■■■■■ 4.01
FLT1-202ENST00000539099 SOGA1O94964 1423 aa39.99■■■■□ 3.99
FLT1-202ENST00000539099 TOP2BQ02880 1626 aa39.98■■■■□ 3.99
FLT1-202ENST00000539099 BIVM-ERCC5R4GMW8 1640 aa39.96■■■■□ 3.99
FLT1-202ENST00000539099 EEA1Q15075 1411 aa39.94■■■■□ 3.98
FLT1-202ENST00000539099 CADPSQ9ULU8 1353 aa39.93■■■■□ 3.98
FLT1-202ENST00000539099 RUSC2Q8N2Y8 1516 aa39.84■■■■□ 3.97
FLT1-202ENST00000539099 CUX1P39880 1505 aa39.78■■■■□ 3.96
FLT1-202ENST00000539099 EHMT2Q96KQ7 1210 aa39.71■■■■□ 3.95
FLT1-202ENST00000539099 CSRNP3Q8WYN3 585 aa39.66■■■■□ 3.94
FLT1-202ENST00000539099 LAMC3Q9Y6N6 1575 aa39.53■■■■□ 3.92
FLT1-202ENST00000539099 FANCD2Q9BXW9 1451 aa39.53■■■■□ 3.92
FLT1-202ENST00000539099 NESP48681 1621 aa39.51■■■■□ 3.92
FLT1-202ENST00000539099 KIF21BO75037 1637 aa39.47■■■■□ 3.91
FLT1-202ENST00000539099 GOLGA3Q08378 1498 aa39.44■■■■□ 3.9
FLT1-202ENST00000539099 DNAJC5BQ9UF47 199 aa39.44■■■■□ 3.9
FLT1-202ENST00000539099 CEP164Q9UPV0 1460 aa39.4■■■■□ 3.9
FLT1-202ENST00000539099 TNIKQ9UKE5 1360 aa39.38■■■■□ 3.89
FLT1-202ENST00000539099 DNMBPQ6XZF7 1577 aa39.27■■■■□ 3.88
FLT1-202ENST00000539099 FGD5Q6ZNL6 1462 aa39.26■■■■□ 3.88
FLT1-202ENST00000539099 KIF27Q86VH2 1401 aa39.24■■■■□ 3.87
FLT1-202ENST00000539099 CEP162Q5TB80 1403 aa39.23■■■■□ 3.87
FLT1-202ENST00000539099 UBTFP17480 764 aaKnown RBP39.17■■■■□ 3.86
FLT1-202ENST00000539099 TOPBP1Q92547 1522 aa39.17■■■■□ 3.86
FLT1-202ENST00000539099 RAPGEF2Q9Y4G8 1499 aa39.16■■■■□ 3.86
FLT1-202ENST00000539099 PDS5BQ9NTI5 1447 aa39.15■■■■□ 3.86
FLT1-202ENST00000539099 PRXQ9BXM0 1461 aa39.13■■■■□ 3.85
FLT1-202ENST00000539099 ERICH3Q5RHP9 1530 aa39.11■■■■□ 3.85
FLT1-202ENST00000539099 KIF21AQ7Z4S6 1674 aa39.08■■■■□ 3.85
FLT1-202ENST00000539099 CUX2O14529 1486 aa39.06■■■■□ 3.84
FLT1-202ENST00000539099 URB2Q14146 1524 aaKnown RBP39.04■■■■□ 3.84
FLT1-202ENST00000539099 PCGF6Q9BYE7 350 aa39.03■■■■□ 3.84
FLT1-202ENST00000539099 POLA1P09884 1462 aaPredicted RBP39.01■■■■□ 3.84
FLT1-202ENST00000539099 ABCA10Q8WWZ4 1543 aa38.92■■■■□ 3.82
FLT1-202ENST00000539099 TRIM26Q12899 539 aaPredicted RBP38.91■■■■□ 3.82
FLT1-202ENST00000539099 RAD54L2Q9Y4B4 1467 aa38.89■■■■□ 3.82
FLT1-202ENST00000539099 IGF1RP08069 1367 aa38.85■■■■□ 3.81
FLT1-202ENST00000539099 WDR97A6NE52 1622 aa38.83■■■■□ 3.81
FLT1-202ENST00000539099 CLIP1P30622 1438 aa38.81■■■■□ 3.8
FLT1-202ENST00000539099 MRC2Q9UBG0 1479 aa38.66■■■■□ 3.78
FLT1-202ENST00000539099 CARMIL1Q5VZK9 1371 aa38.65■■■■□ 3.78
FLT1-202ENST00000539099 ABCA5Q8WWZ7 1642 aa38.61■■■■□ 3.77
FLT1-202ENST00000539099 TARBP1Q13395 1621 aaKnown RBP38.58■■■■□ 3.77
FLT1-202ENST00000539099 CUL7Q14999 1698 aa38.57■■■■□ 3.76
FLT1-202ENST00000539099 VPS8Q8N3P4 1428 aa38.55■■■■□ 3.76
FLT1-202ENST00000539099 PPARGC1BQ86YN6 1023 aaKnown RBP38.51■■■■□ 3.76
FLT1-202ENST00000539099 WDR62O43379 1518 aa38.48■■■■□ 3.75
FLT1-202ENST00000539099 GAPVD1Q14C86 1478 aa38.44■■■■□ 3.74
FLT1-202ENST00000539099 TDRD9Q8NDG6 1382 aaKnown RBP38.43■■■■□ 3.74
FLT1-202ENST00000539099 ARAP1Q96P48 1450 aa38.43■■■■□ 3.74
FLT1-202ENST00000539099 RANGAP1P46060 587 aaPredicted RBP38.43■■■■□ 3.74
FLT1-202ENST00000539099 ERCC6Q03468 1493 aa38.34■■■■□ 3.73
FLT1-202ENST00000539099 ARHGAP35Q9NRY4 1499 aa38.34■■■■□ 3.73
FLT1-202ENST00000539099 THOC2Q8NI27 1593 aaKnown RBP38.31■■■■□ 3.72
FLT1-202ENST00000539099 PBRM1Q86U86 1689 aa38.28■■■■□ 3.72
FLT1-202ENST00000539099 HRCP23327 699 aa38.27■■■■□ 3.72
FLT1-202ENST00000539099 IFT140Q96RY7 1462 aa38.25■■■■□ 3.71
FLT1-202ENST00000539099 CTTNBP2Q8WZ74 1663 aa38.25■■■■□ 3.71
FLT1-202ENST00000539099 AQRO60306 1485 aaKnown RBP eCLIP38.14■■■■□ 3.7
FLT1-202ENST00000539099 TTBK1Q5TCY1 1321 aaPredicted RBP38.12■■■■□ 3.69
FLT1-202ENST00000539099 ZNF608Q9ULD9 1512 aaPredicted RBP38.08■■■■□ 3.69
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms