RNA–Protein interactions for RNA: ENST00000204566.6

SPG21-201, Transcript of SPG21, maspardin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPG21, Length 1,822 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-201ENST00000204566 NISCHQ9Y2I1 1504 aa52.83■■■■■ 6.05
SPG21-201ENST00000204566 CCDC180Q9P1Z9 1646 aa46.23■■■■■ 4.99
SPG21-201ENST00000204566 ZCCHC6Q5VYS8 1495 aaKnown RBP44.41■■■■■ 4.7
SPG21-201ENST00000204566 DCAF1Q9Y4B6 1507 aa43.76■■■■■ 4.6
SPG21-201ENST00000204566 ABCC9O60706 1549 aa43.6■■■■■ 4.57
SPG21-201ENST00000204566 DCAF8L2P0C7V8 631 aa43.45■■■■■ 4.55
SPG21-201ENST00000204566 MYO15BQ96JP2 1530 aa43.29■■■■■ 4.52
SPG21-201ENST00000204566 NACADO15069 1562 aa43.01■■■■■ 4.48
SPG21-201ENST00000204566 SHROOM4Q9ULL8 1493 aa42.91■■■■■ 4.46
SPG21-201ENST00000204566 RB1CC1Q8TDY2 1594 aa42.67■■■■■ 4.42
SPG21-201ENST00000204566 SCRIBQ14160 1630 aa42.39■■■■■ 4.38
SPG21-201ENST00000204566 UNC13AQ9UPW8 1703 aa41.79■■■■■ 4.28
SPG21-201ENST00000204566 BICRAQ9NZM4 1560 aa41.33■■■■■ 4.21
SPG21-201ENST00000204566 SUPT5HO00267 1087 aaKnown RBP41.21■■■■■ 4.19
SPG21-201ENST00000204566 PABPN1Q86U42 306 aaKnown RBP eCLIP41■■■■■ 4.15
SPG21-201ENST00000204566 CECR2Q9BXF3 1484 aa40.99■■■■■ 4.15
SPG21-201ENST00000204566 RSF1Q96T23 1441 aaPredicted RBP40.91■■■■■ 4.14
SPG21-201ENST00000204566 BAZ1AQ9NRL2 1556 aaPredicted RBP40.85■■■■■ 4.13
SPG21-201ENST00000204566 MROH2BQ7Z745 1585 aa40.78■■■■■ 4.12
SPG21-201ENST00000204566 SMARCA4P51532 1647 aa40.67■■■■■ 4.1
SPG21-201ENST00000204566 WIZO95785 1651 aa40.46■■■■■ 4.07
SPG21-201ENST00000204566 CHIC1Q5VXU3 224 aa40.3■■■■■ 4.04
SPG21-201ENST00000204566 PEG3Q9GZU2 1588 aa40.2■■■■■ 4.03
SPG21-201ENST00000204566 EIF4G1Q04637 1599 aaKnown RBP40.11■■■■■ 4.01
SPG21-201ENST00000204566 TOP2AP11388 1531 aaKnown RBP40.1■■■■■ 4.01
SPG21-201ENST00000204566 SMARCA2P51531 1590 aa40.01■■■■■ 4
SPG21-201ENST00000204566 ATAD2BQ9ULI0 1458 aa39.97■■■■□ 3.99
SPG21-201ENST00000204566 BAZ1BQ9UIG0 1483 aaKnown RBP39.77■■■■□ 3.96
SPG21-201ENST00000204566 HMGXB3Q12766 1538 aa39.67■■■■□ 3.94
SPG21-201ENST00000204566 NCAPD3P42695 1498 aa39.65■■■■□ 3.94
SPG21-201ENST00000204566 CCDC88BA6NC98 1476 aa39.6■■■■□ 3.93
SPG21-201ENST00000204566 CC2D2AQ9P2K1 1620 aa39.52■■■■□ 3.92
SPG21-201ENST00000204566 HRCP23327 699 aa39.35■■■■□ 3.89
SPG21-201ENST00000204566 PCGF6Q9BYE7 350 aa38.95■■■■□ 3.83
SPG21-201ENST00000204566 TRIM41Q8WV44 630 aa38.81■■■■□ 3.8
SPG21-201ENST00000204566 LOC105371045A0A1W2PR82 267 aa38.77■■■■□ 3.8
SPG21-201ENST00000204566 ABCC8Q09428 1581 aa38.76■■■■□ 3.8
SPG21-201ENST00000204566 CFTRP13569 1480 aa38.75■■■■□ 3.79
SPG21-201ENST00000204566 PRDM2Q13029 1718 aa38.68■■■■□ 3.78
SPG21-201ENST00000204566 CADPSQ9ULU8 1353 aa38.6■■■■□ 3.77
SPG21-201ENST00000204566 TRIM26Q12899 539 aaPredicted RBP38.56■■■■□ 3.76
SPG21-201ENST00000204566 WRNQ14191 1432 aaPredicted RBP eCLIP38.54■■■■□ 3.76
SPG21-201ENST00000204566 SYNJ1O43426 1573 aa38.4■■■■□ 3.74
SPG21-201ENST00000204566 LAMC3Q9Y6N6 1575 aa38.37■■■■□ 3.73
SPG21-201ENST00000204566 DNAJC5BQ9UF47 199 aa38.37■■■■□ 3.73
SPG21-201ENST00000204566 TOP2BQ02880 1626 aa38.29■■■■□ 3.72
SPG21-201ENST00000204566 BIVM-ERCC5R4GMW8 1640 aa38.28■■■■□ 3.72
SPG21-201ENST00000204566 NESP48681 1621 aa38.24■■■■□ 3.71
SPG21-201ENST00000204566 FANCD2Q9BXW9 1451 aa38.2■■■■□ 3.71
SPG21-201ENST00000204566 CUX1P39880 1505 aa38.16■■■■□ 3.7
SPG21-201ENST00000204566 ZEB1P37275 1124 aaPredicted RBP38.06■■■■□ 3.68
SPG21-201ENST00000204566 FAM9AQ8IZU1 332 aaPredicted RBP38.03■■■■□ 3.68
SPG21-201ENST00000204566 PDS5BQ9NTI5 1447 aa38.02■■■■□ 3.68
SPG21-201ENST00000204566 EEA1Q15075 1411 aa38.02■■■■□ 3.68
SPG21-201ENST00000204566 PPARGC1BQ86YN6 1023 aaKnown RBP38■■■■□ 3.67
SPG21-201ENST00000204566 CEP164Q9UPV0 1460 aa38■■■■□ 3.67
SPG21-201ENST00000204566 SOGA1O94964 1423 aa37.97■■■■□ 3.67
SPG21-201ENST00000204566 DNMBPQ6XZF7 1577 aa37.9■■■■□ 3.66
SPG21-201ENST00000204566 KIF21AQ7Z4S6 1674 aa37.88■■■■□ 3.65
SPG21-201ENST00000204566 RUSC2Q8N2Y8 1516 aa37.81■■■■□ 3.64
SPG21-201ENST00000204566 TOPBP1Q92547 1522 aa37.79■■■■□ 3.64
SPG21-201ENST00000204566 FGD5Q6ZNL6 1462 aa37.76■■■■□ 3.63
SPG21-201ENST00000204566 URB2Q14146 1524 aaKnown RBP37.72■■■■□ 3.63
SPG21-201ENST00000204566 CSRNP3Q8WYN3 585 aa37.67■■■■□ 3.62
SPG21-201ENST00000204566 POLA1P09884 1462 aaPredicted RBP37.59■■■■□ 3.61
SPG21-201ENST00000204566 KIF27Q86VH2 1401 aa37.59■■■■□ 3.61
SPG21-201ENST00000204566 MRC2Q9UBG0 1479 aa37.56■■■■□ 3.6
SPG21-201ENST00000204566 KIF21BO75037 1637 aa37.54■■■■□ 3.6
SPG21-201ENST00000204566 CUX2O14529 1486 aa37.48■■■■□ 3.59
SPG21-201ENST00000204566 GOLGA3Q08378 1498 aa37.47■■■■□ 3.59
SPG21-201ENST00000204566 ABCA10Q8WWZ4 1543 aa37.45■■■■□ 3.59
SPG21-201ENST00000204566 ERCC6Q03468 1493 aa37.44■■■■□ 3.58
SPG21-201ENST00000204566 EHMT2Q96KQ7 1210 aa37.44■■■■□ 3.58
SPG21-201ENST00000204566 RAD54L2Q9Y4B4 1467 aa37.41■■■■□ 3.58
SPG21-201ENST00000204566 WDR97A6NE52 1622 aa37.4■■■■□ 3.58
SPG21-201ENST00000204566 WDR62O43379 1518 aa37.39■■■■□ 3.58
SPG21-201ENST00000204566 PRXQ9BXM0 1461 aa37.31■■■■□ 3.56
SPG21-201ENST00000204566 THOC2Q8NI27 1593 aaKnown RBP37.3■■■■□ 3.56
SPG21-201ENST00000204566 ERICH3Q5RHP9 1530 aa37.3■■■■□ 3.56
SPG21-201ENST00000204566 TNIKQ9UKE5 1360 aa37.28■■■■□ 3.56
SPG21-201ENST00000204566 TARBP1Q13395 1621 aaKnown RBP37.25■■■■□ 3.55
SPG21-201ENST00000204566 RAPGEF2Q9Y4G8 1499 aa37.24■■■■□ 3.55
SPG21-201ENST00000204566 ABCA5Q8WWZ7 1642 aa37.19■■■■□ 3.54
SPG21-201ENST00000204566 IGF1RP08069 1367 aa37.18■■■■□ 3.54
SPG21-201ENST00000204566 UBTFP17480 764 aaKnown RBP37.17■■■■□ 3.54
SPG21-201ENST00000204566 IFT140Q96RY7 1462 aa37.09■■■■□ 3.53
SPG21-201ENST00000204566 CEP162Q5TB80 1403 aa37.09■■■■□ 3.53
SPG21-201ENST00000204566 CUL7Q14999 1698 aa37.07■■■■□ 3.53
SPG21-201ENST00000204566 GAPVD1Q14C86 1478 aa37.05■■■■□ 3.52
SPG21-201ENST00000204566 TDRD9Q8NDG6 1382 aaKnown RBP37.02■■■■□ 3.52
SPG21-201ENST00000204566 CARMIL1Q5VZK9 1371 aa37.02■■■■□ 3.52
SPG21-201ENST00000204566 PBRM1Q86U86 1689 aa36.93■■■■□ 3.5
SPG21-201ENST00000204566 ZNF608Q9ULD9 1512 aaPredicted RBP36.82■■■■□ 3.48
SPG21-201ENST00000204566 AQRO60306 1485 aaKnown RBP eCLIP36.81■■■■□ 3.48
SPG21-201ENST00000204566 CLIP1P30622 1438 aa36.81■■■■□ 3.48
SPG21-201ENST00000204566 EIF4G3O43432 1585 aaKnown RBP36.8■■■■□ 3.48
SPG21-201ENST00000204566 GRIN2BQ13224 1484 aa36.79■■■■□ 3.48
SPG21-201ENST00000204566 ADAMTS12P58397 1594 aa36.72■■■■□ 3.47
SPG21-201ENST00000204566 CCER1Q8TC90 406 aaPredicted RBP36.72■■■■□ 3.47
SPG21-201ENST00000204566 FHAD1B1AJZ9 1412 aa36.66■■■■□ 3.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms