RNA–Protein interactions for RNA: ENST00000514004.5

GCLC-209, Transcript of glutamate-cysteine ligase catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene GCLC, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCLC-209ENST00000514004 NISCHQ9Y2I1 1504 aa51.06■■■■■ 5.76
GCLC-209ENST00000514004 CCDC180Q9P1Z9 1646 aa43.64■■■■■ 4.58
GCLC-209ENST00000514004 ZCCHC6Q5VYS8 1495 aaKnown RBP43.14■■■■■ 4.5
GCLC-209ENST00000514004 SHROOM4Q9ULL8 1493 aa43.05■■■■■ 4.48
GCLC-209ENST00000514004 DCAF8L2P0C7V8 631 aa42.14■■■■■ 4.34
GCLC-209ENST00000514004 SUPT5HO00267 1087 aaKnown RBP42.02■■■■■ 4.32
GCLC-209ENST00000514004 DCAF1Q9Y4B6 1507 aa41.97■■■■■ 4.31
GCLC-209ENST00000514004 MYO15BQ96JP2 1530 aa40.9■■■■■ 4.14
GCLC-209ENST00000514004 CHIC1Q5VXU3 224 aa40.8■■■■■ 4.12
GCLC-209ENST00000514004 SCRIBQ14160 1630 aa40.73■■■■■ 4.11
GCLC-209ENST00000514004 ABCC9O60706 1549 aa40.63■■■■■ 4.1
GCLC-209ENST00000514004 NACADO15069 1562 aa40.39■■■■■ 4.06
GCLC-209ENST00000514004 RSF1Q96T23 1441 aaPredicted RBP40.24■■■■■ 4.03
GCLC-209ENST00000514004 CECR2Q9BXF3 1484 aa39.82■■■■□ 3.97
GCLC-209ENST00000514004 RB1CC1Q8TDY2 1594 aa39.77■■■■□ 3.96
GCLC-209ENST00000514004 MROH2BQ7Z745 1585 aa39.66■■■■□ 3.94
GCLC-209ENST00000514004 LOC105371045A0A1W2PR82 267 aa39.52■■■■□ 3.92
GCLC-209ENST00000514004 WIZO95785 1651 aa39.43■■■■□ 3.9
GCLC-209ENST00000514004 UNC13AQ9UPW8 1703 aa39.27■■■■□ 3.88
GCLC-209ENST00000514004 BAZ1AQ9NRL2 1556 aaPredicted RBP39.23■■■■□ 3.87
GCLC-209ENST00000514004 TRIM41Q8WV44 630 aa39.2■■■■□ 3.87
GCLC-209ENST00000514004 PCGF6Q9BYE7 350 aa39.04■■■■□ 3.84
GCLC-209ENST00000514004 SMARCA4P51532 1647 aa38.97■■■■□ 3.83
GCLC-209ENST00000514004 HRCP23327 699 aa38.85■■■■□ 3.81
GCLC-209ENST00000514004 EIF4G1Q04637 1599 aaKnown RBP38.84■■■■□ 3.81
GCLC-209ENST00000514004 TOP2AP11388 1531 aaKnown RBP38.82■■■■□ 3.8
GCLC-209ENST00000514004 FAM9AQ8IZU1 332 aaPredicted RBP38.81■■■■□ 3.8
GCLC-209ENST00000514004 BICRAQ9NZM4 1560 aa38.8■■■■□ 3.8
GCLC-209ENST00000514004 PABPN1Q86U42 306 aaKnown RBP eCLIP38.67■■■■□ 3.78
GCLC-209ENST00000514004 CCDC88BA6NC98 1476 aa38.62■■■■□ 3.77
GCLC-209ENST00000514004 SMARCA2P51531 1590 aa38.61■■■■□ 3.77
GCLC-209ENST00000514004 TRIM26Q12899 539 aaPredicted RBP38.43■■■■□ 3.74
GCLC-209ENST00000514004 EHMT2Q96KQ7 1210 aa38.42■■■■□ 3.74
GCLC-209ENST00000514004 ABCC8Q09428 1581 aa38.38■■■■□ 3.73
GCLC-209ENST00000514004 PEG3Q9GZU2 1588 aa38.31■■■■□ 3.72
GCLC-209ENST00000514004 PPARGC1BQ86YN6 1023 aaKnown RBP38.08■■■■□ 3.69
GCLC-209ENST00000514004 ATAD2BQ9ULI0 1458 aa38.04■■■■□ 3.68
GCLC-209ENST00000514004 SOGA1O94964 1423 aa37.94■■■■□ 3.66
GCLC-209ENST00000514004 BAZ1BQ9UIG0 1483 aaKnown RBP37.87■■■■□ 3.65
GCLC-209ENST00000514004 RUSC2Q8N2Y8 1516 aa37.79■■■■□ 3.64
GCLC-209ENST00000514004 WRNQ14191 1432 aaPredicted RBP eCLIP37.77■■■■□ 3.64
GCLC-209ENST00000514004 EEA1Q15075 1411 aa37.69■■■■□ 3.62
GCLC-209ENST00000514004 SYNJ1O43426 1573 aa37.66■■■■□ 3.62
GCLC-209ENST00000514004 CSRNP3Q8WYN3 585 aa37.63■■■■□ 3.61
GCLC-209ENST00000514004 CEP162Q5TB80 1403 aa37.57■■■■□ 3.61
GCLC-209ENST00000514004 TNIKQ9UKE5 1360 aa37.56■■■■□ 3.6
GCLC-209ENST00000514004 GOLGA3Q08378 1498 aa37.4■■■■□ 3.58
GCLC-209ENST00000514004 NCAPD3P42695 1498 aa37.38■■■■□ 3.58
GCLC-209ENST00000514004 ZEB1P37275 1124 aaPredicted RBP37.37■■■■□ 3.57
GCLC-209ENST00000514004 HMGXB3Q12766 1538 aa37.37■■■■□ 3.57
GCLC-209ENST00000514004 UBTFP17480 764 aaKnown RBP37.36■■■■□ 3.57
GCLC-209ENST00000514004 KIF21BO75037 1637 aa37.25■■■■□ 3.55
GCLC-209ENST00000514004 TOP2BQ02880 1626 aa37.24■■■■□ 3.55
GCLC-209ENST00000514004 CEP164Q9UPV0 1460 aa37.23■■■■□ 3.55
GCLC-209ENST00000514004 BIVM-ERCC5R4GMW8 1640 aa37.14■■■■□ 3.54
GCLC-209ENST00000514004 TTBK1Q5TCY1 1321 aaPredicted RBP37.09■■■■□ 3.53
GCLC-209ENST00000514004 RAPGEF2Q9Y4G8 1499 aa37.04■■■■□ 3.52
GCLC-209ENST00000514004 CFTRP13569 1480 aa36.98■■■■□ 3.51
GCLC-209ENST00000514004 CUX1P39880 1505 aa36.96■■■■□ 3.51
GCLC-209ENST00000514004 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.96■■■■□ 3.51
GCLC-209ENST00000514004 CLIP1P30622 1438 aa36.94■■■■□ 3.5
GCLC-209ENST00000514004 CCER1Q8TC90 406 aaPredicted RBP36.78■■■■□ 3.48
GCLC-209ENST00000514004 PRXQ9BXM0 1461 aa36.77■■■■□ 3.48
GCLC-209ENST00000514004 VPS8Q8N3P4 1428 aa36.76■■■■□ 3.48
GCLC-209ENST00000514004 ERICH3Q5RHP9 1530 aa36.72■■■■□ 3.47
GCLC-209ENST00000514004 PRDM2Q13029 1718 aa36.71■■■■□ 3.47
GCLC-209ENST00000514004 RANGAP1P46060 587 aaPredicted RBP36.64■■■■□ 3.46
GCLC-209ENST00000514004 KIF27Q86VH2 1401 aa36.62■■■■□ 3.45
GCLC-209ENST00000514004 CC2D2AQ9P2K1 1620 aa36.61■■■■□ 3.45
GCLC-209ENST00000514004 CADPSQ9ULU8 1353 aa36.59■■■■□ 3.45
GCLC-209ENST00000514004 ARAP1Q96P48 1450 aa36.46■■■■□ 3.43
GCLC-209ENST00000514004 APLP2Q06481 763 aa36.38■■■■□ 3.41
GCLC-209ENST00000514004 CUX2O14529 1486 aa36.34■■■■□ 3.41
GCLC-209ENST00000514004 FGD5Q6ZNL6 1462 aa36.32■■■■□ 3.4
GCLC-209ENST00000514004 HNRNPUL2Q1KMD3 747 aaKnown RBP36.31■■■■□ 3.4
GCLC-209ENST00000514004 IGF1RP08069 1367 aa36.29■■■■□ 3.4
GCLC-209ENST00000514004 FANCD2Q9BXW9 1451 aa36.23■■■■□ 3.39
GCLC-209ENST00000514004 ARHGAP35Q9NRY4 1499 aa36.21■■■■□ 3.39
GCLC-209ENST00000514004 KANK4Q5T7N3 995 aaPredicted RBP36.15■■■■□ 3.38
GCLC-209ENST00000514004 NESP48681 1621 aa36.11■■■■□ 3.37
GCLC-209ENST00000514004 CARMIL1Q5VZK9 1371 aa36.09■■■■□ 3.37
GCLC-209ENST00000514004 DNMBPQ6XZF7 1577 aa36.04■■■■□ 3.36
GCLC-209ENST00000514004 TOPBP1Q92547 1522 aa35.99■■■■□ 3.35
GCLC-209ENST00000514004 RAD54L2Q9Y4B4 1467 aa35.98■■■■□ 3.35
GCLC-209ENST00000514004 POLA1P09884 1462 aaPredicted RBP35.95■■■■□ 3.35
GCLC-209ENST00000514004 ABCA10Q8WWZ4 1543 aa35.92■■■■□ 3.34
GCLC-209ENST00000514004 RRBP1Q9P2E9 1410 aaKnown RBP35.88■■■■□ 3.33
GCLC-209ENST00000514004 DIEXFQ68CQ4 756 aaKnown RBP35.87■■■■□ 3.33
GCLC-209ENST00000514004 LAMC3Q9Y6N6 1575 aa35.83■■■■□ 3.33
GCLC-209ENST00000514004 DNAJC5BQ9UF47 199 aa35.78■■■■□ 3.32
GCLC-209ENST00000514004 URB2Q14146 1524 aaKnown RBP35.78■■■■□ 3.32
GCLC-209ENST00000514004 TIAM1Q13009 1591 aa35.74■■■■□ 3.31
GCLC-209ENST00000514004 ZNF316A6NFI3 1004 aaPredicted RBP35.74■■■■□ 3.31
GCLC-209ENST00000514004 MAP3K1Q13233 1512 aa35.71■■■■□ 3.31
GCLC-209ENST00000514004 CCNB3Q8WWL7 1395 aa35.69■■■■□ 3.3
GCLC-209ENST00000514004 WDR97A6NE52 1622 aa35.68■■■■□ 3.3
GCLC-209ENST00000514004 DHX57Q6P158 1386 aaKnown RBP35.68■■■■□ 3.3
GCLC-209ENST00000514004 CUL7Q14999 1698 aa35.66■■■■□ 3.3
GCLC-209ENST00000514004 P3H3Q8IVL6 736 aa35.61■■■■□ 3.29
GCLC-209ENST00000514004 PCF11O94913 1555 aaKnown RBP35.6■■■■□ 3.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms