RNA–Protein interactions for RNA: ENST00000247005.7

GDF1-201, Transcript of growth differentiation factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GDF1, Length 2,517 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1-201ENST00000247005 NISCHQ9Y2I1 1504 aa51.07■■■■■ 5.77
GDF1-201ENST00000247005 CCDC180Q9P1Z9 1646 aa43.56■■■■■ 4.56
GDF1-201ENST00000247005 SHROOM4Q9ULL8 1493 aa43.33■■■■■ 4.53
GDF1-201ENST00000247005 ZCCHC6Q5VYS8 1495 aaKnown RBP43.09■■■■■ 4.49
GDF1-201ENST00000247005 DCAF8L2P0C7V8 631 aa42.63■■■■■ 4.42
GDF1-201ENST00000247005 SUPT5HO00267 1087 aaKnown RBP42.27■■■■■ 4.36
GDF1-201ENST00000247005 DCAF1Q9Y4B6 1507 aa41.83■■■■■ 4.29
GDF1-201ENST00000247005 ABCC9O60706 1549 aa40.9■■■■■ 4.14
GDF1-201ENST00000247005 SCRIBQ14160 1630 aa40.86■■■■■ 4.13
GDF1-201ENST00000247005 CHIC1Q5VXU3 224 aa40.83■■■■■ 4.13
GDF1-201ENST00000247005 MYO15BQ96JP2 1530 aa40.78■■■■■ 4.12
GDF1-201ENST00000247005 NACADO15069 1562 aa40.42■■■■■ 4.06
GDF1-201ENST00000247005 RSF1Q96T23 1441 aaPredicted RBP40.27■■■■■ 4.04
GDF1-201ENST00000247005 CECR2Q9BXF3 1484 aa39.94■■■■□ 3.98
GDF1-201ENST00000247005 RB1CC1Q8TDY2 1594 aa39.86■■■■□ 3.97
GDF1-201ENST00000247005 MROH2BQ7Z745 1585 aa39.72■■■■□ 3.95
GDF1-201ENST00000247005 LOC105371045A0A1W2PR82 267 aa39.66■■■■□ 3.94
GDF1-201ENST00000247005 WIZO95785 1651 aa39.48■■■■□ 3.91
GDF1-201ENST00000247005 TRIM41Q8WV44 630 aa39.36■■■■□ 3.89
GDF1-201ENST00000247005 UNC13AQ9UPW8 1703 aa39.28■■■■□ 3.88
GDF1-201ENST00000247005 BAZ1AQ9NRL2 1556 aaPredicted RBP39.23■■■■□ 3.87
GDF1-201ENST00000247005 PCGF6Q9BYE7 350 aa39.1■■■■□ 3.85
GDF1-201ENST00000247005 FAM9AQ8IZU1 332 aaPredicted RBP39.09■■■■□ 3.85
GDF1-201ENST00000247005 PABPN1Q86U42 306 aaKnown RBP eCLIP39.08■■■■□ 3.85
GDF1-201ENST00000247005 SMARCA4P51532 1647 aa38.98■■■■□ 3.83
GDF1-201ENST00000247005 BICRAQ9NZM4 1560 aa38.85■■■■□ 3.81
GDF1-201ENST00000247005 EHMT2Q96KQ7 1210 aa38.83■■■■□ 3.81
GDF1-201ENST00000247005 TOP2AP11388 1531 aaKnown RBP38.8■■■■□ 3.8
GDF1-201ENST00000247005 HRCP23327 699 aa38.69■■■■□ 3.78
GDF1-201ENST00000247005 CCDC88BA6NC98 1476 aa38.69■■■■□ 3.78
GDF1-201ENST00000247005 EIF4G1Q04637 1599 aaKnown RBP38.67■■■■□ 3.78
GDF1-201ENST00000247005 SMARCA2P51531 1590 aa38.6■■■■□ 3.77
GDF1-201ENST00000247005 ABCC8Q09428 1581 aa38.45■■■■□ 3.75
GDF1-201ENST00000247005 TRIM26Q12899 539 aaPredicted RBP38.4■■■■□ 3.74
GDF1-201ENST00000247005 PEG3Q9GZU2 1588 aa38.22■■■■□ 3.71
GDF1-201ENST00000247005 ATAD2BQ9ULI0 1458 aa38.12■■■■□ 3.69
GDF1-201ENST00000247005 PPARGC1BQ86YN6 1023 aaKnown RBP38.09■■■■□ 3.69
GDF1-201ENST00000247005 SOGA1O94964 1423 aa38.01■■■■□ 3.68
GDF1-201ENST00000247005 BAZ1BQ9UIG0 1483 aaKnown RBP37.99■■■■□ 3.67
GDF1-201ENST00000247005 RUSC2Q8N2Y8 1516 aa37.87■■■■□ 3.65
GDF1-201ENST00000247005 WRNQ14191 1432 aaPredicted RBP eCLIP37.83■■■■□ 3.65
GDF1-201ENST00000247005 CSRNP3Q8WYN3 585 aa37.74■■■■□ 3.63
GDF1-201ENST00000247005 SYNJ1O43426 1573 aa37.66■■■■□ 3.62
GDF1-201ENST00000247005 EEA1Q15075 1411 aa37.61■■■■□ 3.61
GDF1-201ENST00000247005 UBTFP17480 764 aaKnown RBP37.58■■■■□ 3.61
GDF1-201ENST00000247005 CEP162Q5TB80 1403 aa37.57■■■■□ 3.61
GDF1-201ENST00000247005 TNIKQ9UKE5 1360 aa37.52■■■■□ 3.6
GDF1-201ENST00000247005 NCAPD3P42695 1498 aa37.44■■■■□ 3.58
GDF1-201ENST00000247005 TTBK1Q5TCY1 1321 aaPredicted RBP37.43■■■■□ 3.58
GDF1-201ENST00000247005 GOLGA3Q08378 1498 aa37.38■■■■□ 3.57
GDF1-201ENST00000247005 HMGXB3Q12766 1538 aa37.36■■■■□ 3.57
GDF1-201ENST00000247005 ZEB1P37275 1124 aaPredicted RBP37.26■■■■□ 3.55
GDF1-201ENST00000247005 CEP164Q9UPV0 1460 aa37.21■■■■□ 3.55
GDF1-201ENST00000247005 TOP2BQ02880 1626 aa37.2■■■■□ 3.55
GDF1-201ENST00000247005 KIF21BO75037 1637 aa37.13■■■■□ 3.53
GDF1-201ENST00000247005 RAPGEF2Q9Y4G8 1499 aa37.09■■■■□ 3.53
GDF1-201ENST00000247005 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.06■■■■□ 3.52
GDF1-201ENST00000247005 RANGAP1P46060 587 aaPredicted RBP37.05■■■■□ 3.52
GDF1-201ENST00000247005 BIVM-ERCC5R4GMW8 1640 aa37.05■■■■□ 3.52
GDF1-201ENST00000247005 CFTRP13569 1480 aa37.02■■■■□ 3.52
GDF1-201ENST00000247005 CUX1P39880 1505 aa36.99■■■■□ 3.51
GDF1-201ENST00000247005 CLIP1P30622 1438 aa36.98■■■■□ 3.51
GDF1-201ENST00000247005 CCER1Q8TC90 406 aaPredicted RBP36.87■■■■□ 3.49
GDF1-201ENST00000247005 CC2D2AQ9P2K1 1620 aa36.78■■■■□ 3.48
GDF1-201ENST00000247005 PRXQ9BXM0 1461 aa36.73■■■■□ 3.47
GDF1-201ENST00000247005 VPS8Q8N3P4 1428 aa36.73■■■■□ 3.47
GDF1-201ENST00000247005 CADPSQ9ULU8 1353 aa36.72■■■■□ 3.47
GDF1-201ENST00000247005 KIF27Q86VH2 1401 aa36.69■■■■□ 3.46
GDF1-201ENST00000247005 ERICH3Q5RHP9 1530 aa36.62■■■■□ 3.45
GDF1-201ENST00000247005 PRDM2Q13029 1718 aa36.59■■■■□ 3.45
GDF1-201ENST00000247005 APLP2Q06481 763 aa36.58■■■■□ 3.45
GDF1-201ENST00000247005 HNRNPUL2Q1KMD3 747 aaKnown RBP36.49■■■■□ 3.43
GDF1-201ENST00000247005 CUX2O14529 1486 aa36.47■■■■□ 3.43
GDF1-201ENST00000247005 ARAP1Q96P48 1450 aa36.43■■■■□ 3.42
GDF1-201ENST00000247005 FGD5Q6ZNL6 1462 aa36.41■■■■□ 3.42
GDF1-201ENST00000247005 IGF1RP08069 1367 aa36.38■■■■□ 3.41
GDF1-201ENST00000247005 FANCD2Q9BXW9 1451 aa36.37■■■■□ 3.41
GDF1-201ENST00000247005 NESP48681 1621 aa36.32■■■■□ 3.41
GDF1-201ENST00000247005 KANK4Q5T7N3 995 aaPredicted RBP36.26■■■■□ 3.4
GDF1-201ENST00000247005 ARHGAP35Q9NRY4 1499 aa36.21■■■■□ 3.39
GDF1-201ENST00000247005 CARMIL1Q5VZK9 1371 aa36.21■■■■□ 3.39
GDF1-201ENST00000247005 DNAJC5BQ9UF47 199 aa36.16■■■■□ 3.38
GDF1-201ENST00000247005 RAD54L2Q9Y4B4 1467 aa36.15■■■■□ 3.38
GDF1-201ENST00000247005 TOPBP1Q92547 1522 aa36.07■■■■□ 3.37
GDF1-201ENST00000247005 DNMBPQ6XZF7 1577 aa36.07■■■■□ 3.37
GDF1-201ENST00000247005 POLA1P09884 1462 aaPredicted RBP36.04■■■■□ 3.36
GDF1-201ENST00000247005 ABCA10Q8WWZ4 1543 aa35.94■■■■□ 3.34
GDF1-201ENST00000247005 P3H3Q8IVL6 736 aa35.92■■■■□ 3.34
GDF1-201ENST00000247005 URB2Q14146 1524 aaKnown RBP35.88■■■■□ 3.33
GDF1-201ENST00000247005 LAMC3Q9Y6N6 1575 aa35.87■■■■□ 3.33
GDF1-201ENST00000247005 DIEXFQ68CQ4 756 aaKnown RBP35.86■■■■□ 3.33
GDF1-201ENST00000247005 RRBP1Q9P2E9 1410 aaKnown RBP35.78■■■■□ 3.32
GDF1-201ENST00000247005 TDRD9Q8NDG6 1382 aaKnown RBP35.75■■■■□ 3.31
GDF1-201ENST00000247005 ITGAEP38570 1179 aa35.74■■■■□ 3.31
GDF1-201ENST00000247005 ATP1B4Q9UN42 357 aaPredicted RBP35.73■■■■□ 3.31
GDF1-201ENST00000247005 ZNF316A6NFI3 1004 aaPredicted RBP35.71■■■■□ 3.31
GDF1-201ENST00000247005 PDS5BQ9NTI5 1447 aa35.71■■■■□ 3.31
GDF1-201ENST00000247005 CCNB3Q8WWL7 1395 aa35.71■■■■□ 3.31
GDF1-201ENST00000247005 TIAM1Q13009 1591 aa35.69■■■■□ 3.3
GDF1-201ENST00000247005 FHOD3Q2V2M9 1422 aa35.67■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms