RNA–Protein interactions for RNA: ENST00000314567.7

CDPF1-201, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDPF1, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-201ENST00000314567 NISCHQ9Y2I1 1504 aa57.35■■■■■ 6.77
CDPF1-201ENST00000314567 CCDC180Q9P1Z9 1646 aa50.26■■■■■ 5.64
CDPF1-201ENST00000314567 ABCC9O60706 1549 aa48.3■■■■■ 5.32
CDPF1-201ENST00000314567 ZCCHC6Q5VYS8 1495 aaKnown RBP48.03■■■■■ 5.28
CDPF1-201ENST00000314567 DCAF8L2P0C7V8 631 aa47.72■■■■■ 5.23
CDPF1-201ENST00000314567 DCAF1Q9Y4B6 1507 aa47.3■■■■■ 5.16
CDPF1-201ENST00000314567 MYO15BQ96JP2 1530 aa46.97■■■■■ 5.11
CDPF1-201ENST00000314567 NACADO15069 1562 aa46.96■■■■■ 5.11
CDPF1-201ENST00000314567 RB1CC1Q8TDY2 1594 aa46.75■■■■■ 5.07
CDPF1-201ENST00000314567 SHROOM4Q9ULL8 1493 aa46.49■■■■■ 5.03
CDPF1-201ENST00000314567 SCRIBQ14160 1630 aa46.28■■■■■ 5
CDPF1-201ENST00000314567 UNC13AQ9UPW8 1703 aa45.92■■■■■ 4.94
CDPF1-201ENST00000314567 PABPN1Q86U42 306 aaKnown RBP eCLIP45.46■■■■■ 4.87
CDPF1-201ENST00000314567 BICRAQ9NZM4 1560 aa45.45■■■■■ 4.87
CDPF1-201ENST00000314567 CECR2Q9BXF3 1484 aa44.72■■■■■ 4.75
CDPF1-201ENST00000314567 MROH2BQ7Z745 1585 aa44.35■■■■■ 4.69
CDPF1-201ENST00000314567 SUPT5HO00267 1087 aaKnown RBP44.35■■■■■ 4.69
CDPF1-201ENST00000314567 BAZ1AQ9NRL2 1556 aaPredicted RBP44.3■■■■■ 4.68
CDPF1-201ENST00000314567 RSF1Q96T23 1441 aaPredicted RBP44.26■■■■■ 4.68
CDPF1-201ENST00000314567 SMARCA4P51532 1647 aa44.25■■■■■ 4.67
CDPF1-201ENST00000314567 EIF4G1Q04637 1599 aaKnown RBP44.1■■■■■ 4.65
CDPF1-201ENST00000314567 WIZO95785 1651 aa43.99■■■■■ 4.63
CDPF1-201ENST00000314567 ATAD2BQ9ULI0 1458 aa43.68■■■■■ 4.58
CDPF1-201ENST00000314567 PEG3Q9GZU2 1588 aa43.66■■■■■ 4.58
CDPF1-201ENST00000314567 CC2D2AQ9P2K1 1620 aa43.65■■■■■ 4.58
CDPF1-201ENST00000314567 SMARCA2P51531 1590 aa43.58■■■■■ 4.57
CDPF1-201ENST00000314567 TOP2AP11388 1531 aaKnown RBP43.41■■■■■ 4.54
CDPF1-201ENST00000314567 BAZ1BQ9UIG0 1483 aaKnown RBP43.39■■■■■ 4.54
CDPF1-201ENST00000314567 NCAPD3P42695 1498 aa43.36■■■■■ 4.53
CDPF1-201ENST00000314567 DNAJC5BQ9UF47 199 aa43.28■■■■■ 4.52
CDPF1-201ENST00000314567 HMGXB3Q12766 1538 aa43.24■■■■■ 4.51
CDPF1-201ENST00000314567 CCDC88BA6NC98 1476 aa43■■■■■ 4.47
CDPF1-201ENST00000314567 CFTRP13569 1480 aa42.24■■■■■ 4.35
CDPF1-201ENST00000314567 CADPSQ9ULU8 1353 aa42.23■■■■■ 4.35
CDPF1-201ENST00000314567 NESP48681 1621 aa42.22■■■■■ 4.35
CDPF1-201ENST00000314567 CHIC1Q5VXU3 224 aa42.15■■■■■ 4.34
CDPF1-201ENST00000314567 LAMC3Q9Y6N6 1575 aa42■■■■■ 4.31
CDPF1-201ENST00000314567 PRDM2Q13029 1718 aa41.99■■■■■ 4.31
CDPF1-201ENST00000314567 ABCC8Q09428 1581 aa41.96■■■■■ 4.31
CDPF1-201ENST00000314567 FANCD2Q9BXW9 1451 aa41.8■■■■■ 4.28
CDPF1-201ENST00000314567 PDS5BQ9NTI5 1447 aa41.69■■■■■ 4.26
CDPF1-201ENST00000314567 KIF21AQ7Z4S6 1674 aa41.68■■■■■ 4.26
CDPF1-201ENST00000314567 WRNQ14191 1432 aaPredicted RBP eCLIP41.66■■■■■ 4.26
CDPF1-201ENST00000314567 TRIM41Q8WV44 630 aa41.65■■■■■ 4.26
CDPF1-201ENST00000314567 SYNJ1O43426 1573 aa41.58■■■■■ 4.25
CDPF1-201ENST00000314567 CEP164Q9UPV0 1460 aa41.58■■■■■ 4.25
CDPF1-201ENST00000314567 CUX1P39880 1505 aa41.5■■■■■ 4.23
CDPF1-201ENST00000314567 ERCC6Q03468 1493 aa41.42■■■■■ 4.22
CDPF1-201ENST00000314567 TOP2BQ02880 1626 aa41.39■■■■■ 4.22
CDPF1-201ENST00000314567 BIVM-ERCC5R4GMW8 1640 aa41.35■■■■■ 4.21
CDPF1-201ENST00000314567 URB2Q14146 1524 aaKnown RBP41.35■■■■■ 4.21
CDPF1-201ENST00000314567 TOPBP1Q92547 1522 aa41.28■■■■■ 4.2
CDPF1-201ENST00000314567 DNMBPQ6XZF7 1577 aa41.27■■■■■ 4.2
CDPF1-201ENST00000314567 MRC2Q9UBG0 1479 aa41.23■■■■■ 4.19
CDPF1-201ENST00000314567 FGD5Q6ZNL6 1462 aa41.14■■■■■ 4.18
CDPF1-201ENST00000314567 THOC2Q8NI27 1593 aaKnown RBP41.13■■■■■ 4.17
CDPF1-201ENST00000314567 WDR62O43379 1518 aa41.05■■■■■ 4.16
CDPF1-201ENST00000314567 POLA1P09884 1462 aaPredicted RBP41.04■■■■■ 4.16
CDPF1-201ENST00000314567 FAM9AQ8IZU1 332 aaPredicted RBP41.01■■■■■ 4.16
CDPF1-201ENST00000314567 SOGA1O94964 1423 aa41.01■■■■■ 4.16
CDPF1-201ENST00000314567 RAD54L2Q9Y4B4 1467 aa40.96■■■■■ 4.15
CDPF1-201ENST00000314567 RUSC2Q8N2Y8 1516 aa40.94■■■■■ 4.14
CDPF1-201ENST00000314567 CUX2O14529 1486 aa40.82■■■■■ 4.12
CDPF1-201ENST00000314567 TARBP1Q13395 1621 aaKnown RBP40.73■■■■■ 4.11
CDPF1-201ENST00000314567 ABCA10Q8WWZ4 1543 aa40.7■■■■■ 4.11
CDPF1-201ENST00000314567 WDR97A6NE52 1622 aa40.68■■■■■ 4.1
CDPF1-201ENST00000314567 KIF27Q86VH2 1401 aa40.62■■■■■ 4.09
CDPF1-201ENST00000314567 TDRD9Q8NDG6 1382 aaKnown RBP40.61■■■■■ 4.09
CDPF1-201ENST00000314567 IFT140Q96RY7 1462 aa40.6■■■■■ 4.09
CDPF1-201ENST00000314567 EEA1Q15075 1411 aa40.58■■■■■ 4.09
CDPF1-201ENST00000314567 EHMT2Q96KQ7 1210 aa40.56■■■■■ 4.08
CDPF1-201ENST00000314567 CSRNP3Q8WYN3 585 aa40.54■■■■■ 4.08
CDPF1-201ENST00000314567 ZNF608Q9ULD9 1512 aaPredicted RBP40.54■■■■■ 4.08
CDPF1-201ENST00000314567 LOC105371045A0A1W2PR82 267 aa40.5■■■■■ 4.07
CDPF1-201ENST00000314567 AQRO60306 1485 aaKnown RBP eCLIP40.47■■■■■ 4.07
CDPF1-201ENST00000314567 ABCA5Q8WWZ7 1642 aa40.46■■■■■ 4.07
CDPF1-201ENST00000314567 GAPVD1Q14C86 1478 aa40.41■■■■■ 4.06
CDPF1-201ENST00000314567 IGF1RP08069 1367 aa40.39■■■■■ 4.06
CDPF1-201ENST00000314567 EIF4G3O43432 1585 aaKnown RBP40.34■■■■■ 4.05
CDPF1-201ENST00000314567 PBRM1Q86U86 1689 aa40.27■■■■■ 4.04
CDPF1-201ENST00000314567 PRXQ9BXM0 1461 aa40.21■■■■■ 4.03
CDPF1-201ENST00000314567 ERICH3Q5RHP9 1530 aa40.19■■■■■ 4.03
CDPF1-201ENST00000314567 RAPGEF2Q9Y4G8 1499 aa40.18■■■■■ 4.02
CDPF1-201ENST00000314567 KIF21BO75037 1637 aa40.18■■■■■ 4.02
CDPF1-201ENST00000314567 GRIN2BQ13224 1484 aa40.17■■■■■ 4.02
CDPF1-201ENST00000314567 CARMIL1Q5VZK9 1371 aa40.16■■■■■ 4.02
CDPF1-201ENST00000314567 GOLGA3Q08378 1498 aa40.09■■■■■ 4.01
CDPF1-201ENST00000314567 CUL7Q14999 1698 aa40.08■■■■■ 4.01
CDPF1-201ENST00000314567 SNAPC4Q5SXM2 1469 aa40.06■■■■■ 4
CDPF1-201ENST00000314567 UBTFP17480 764 aaKnown RBP40.01■■■■■ 4
CDPF1-201ENST00000314567 ADAMTS12P58397 1594 aa39.99■■■■□ 3.99
CDPF1-201ENST00000314567 FHAD1B1AJZ9 1412 aa39.92■■■■□ 3.98
CDPF1-201ENST00000314567 MAGI1Q96QZ7 1491 aaPredicted RBP39.88■■■■□ 3.97
CDPF1-201ENST00000314567 TNIKQ9UKE5 1360 aa39.81■■■■□ 3.96
CDPF1-201ENST00000314567 FBLN2P98095 1184 aa39.79■■■■□ 3.96
CDPF1-201ENST00000314567 SYNJ2O15056 1496 aa39.76■■■■□ 3.96
CDPF1-201ENST00000314567 CHMP7Q8WUX9 453 aaPredicted RBP39.74■■■■□ 3.95
CDPF1-201ENST00000314567 RANGAP1P46060 587 aaPredicted RBP39.72■■■■□ 3.95
CDPF1-201ENST00000314567 GRIN2AQ12879 1464 aa39.71■■■■□ 3.95
CDPF1-201ENST00000314567 CHD1O14646 1710 aa39.63■■■■□ 3.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms