RNA–Protein interactions for RNA: ENST00000321556.4

PINK1-201, Transcript of PTEN induced putative kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PINK1, Length 2,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PINK1-201ENST00000321556 NISCHQ9Y2I1 1504 aa48.55■■■■■ 5.36
PINK1-201ENST00000321556 SHROOM4Q9ULL8 1493 aa42.04■■■■■ 4.32
PINK1-201ENST00000321556 SUPT5HO00267 1087 aaKnown RBP41.25■■■■■ 4.19
PINK1-201ENST00000321556 ZCCHC6Q5VYS8 1495 aaKnown RBP41.04■■■■■ 4.16
PINK1-201ENST00000321556 CCDC180Q9P1Z9 1646 aa41■■■■■ 4.15
PINK1-201ENST00000321556 DCAF8L2P0C7V8 631 aa40.82■■■■■ 4.13
PINK1-201ENST00000321556 CHIC1Q5VXU3 224 aa39.94■■■■□ 3.98
PINK1-201ENST00000321556 MYO15BQ96JP2 1530 aa39.91■■■■□ 3.98
PINK1-201ENST00000321556 DCAF1Q9Y4B6 1507 aa39.55■■■■□ 3.92
PINK1-201ENST00000321556 PCGF6Q9BYE7 350 aa39.03■■■■□ 3.84
PINK1-201ENST00000321556 LOC105371045A0A1W2PR82 267 aa39.01■■■■□ 3.84
PINK1-201ENST00000321556 HRCP23327 699 aa38.88■■■■□ 3.82
PINK1-201ENST00000321556 SCRIBQ14160 1630 aa38.87■■■■□ 3.81
PINK1-201ENST00000321556 ABCC9O60706 1549 aa38.75■■■■□ 3.79
PINK1-201ENST00000321556 RSF1Q96T23 1441 aaPredicted RBP38.57■■■■□ 3.76
PINK1-201ENST00000321556 PPARGC1BQ86YN6 1023 aaKnown RBP38.43■■■■□ 3.74
PINK1-201ENST00000321556 RB1CC1Q8TDY2 1594 aa38.28■■■■□ 3.72
PINK1-201ENST00000321556 TRIM41Q8WV44 630 aa38.22■■■■□ 3.71
PINK1-201ENST00000321556 FAM9AQ8IZU1 332 aaPredicted RBP38.21■■■■□ 3.71
PINK1-201ENST00000321556 EHMT2Q96KQ7 1210 aa38.12■■■■□ 3.69
PINK1-201ENST00000321556 CECR2Q9BXF3 1484 aa38.1■■■■□ 3.69
PINK1-201ENST00000321556 TRIM26Q12899 539 aaPredicted RBP37.98■■■■□ 3.67
PINK1-201ENST00000321556 NACADO15069 1562 aa37.93■■■■□ 3.66
PINK1-201ENST00000321556 MROH2BQ7Z745 1585 aa37.9■■■■□ 3.66
PINK1-201ENST00000321556 WIZO95785 1651 aa37.75■■■■□ 3.63
PINK1-201ENST00000321556 BAZ1AQ9NRL2 1556 aaPredicted RBP37.29■■■■□ 3.56
PINK1-201ENST00000321556 EIF4G1Q04637 1599 aaKnown RBP37.07■■■■□ 3.52
PINK1-201ENST00000321556 ABCC8Q09428 1581 aa37.05■■■■□ 3.52
PINK1-201ENST00000321556 ZEB1P37275 1124 aaPredicted RBP37.02■■■■□ 3.52
PINK1-201ENST00000321556 UNC13AQ9UPW8 1703 aa36.99■■■■□ 3.51
PINK1-201ENST00000321556 SMARCA4P51532 1647 aa36.96■■■■□ 3.51
PINK1-201ENST00000321556 CCDC88BA6NC98 1476 aa36.94■■■■□ 3.5
PINK1-201ENST00000321556 TOP2AP11388 1531 aaKnown RBP36.93■■■■□ 3.5
PINK1-201ENST00000321556 PABPN1Q86U42 306 aaKnown RBP eCLIP36.89■■■■□ 3.5
PINK1-201ENST00000321556 TTBK1Q5TCY1 1321 aaPredicted RBP36.87■■■■□ 3.49
PINK1-201ENST00000321556 SMARCA2P51531 1590 aa36.83■■■■□ 3.49
PINK1-201ENST00000321556 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.73■■■■□ 3.47
PINK1-201ENST00000321556 SOGA1O94964 1423 aa36.7■■■■□ 3.47
PINK1-201ENST00000321556 RUSC2Q8N2Y8 1516 aa36.58■■■■□ 3.45
PINK1-201ENST00000321556 CCER1Q8TC90 406 aaPredicted RBP36.52■■■■□ 3.44
PINK1-201ENST00000321556 CEP162Q5TB80 1403 aa36.49■■■■□ 3.43
PINK1-201ENST00000321556 BICRAQ9NZM4 1560 aa36.47■■■■□ 3.43
PINK1-201ENST00000321556 UBTFP17480 764 aaKnown RBP36.46■■■■□ 3.43
PINK1-201ENST00000321556 CSRNP3Q8WYN3 585 aa36.42■■■■□ 3.42
PINK1-201ENST00000321556 TNIKQ9UKE5 1360 aa36.29■■■■□ 3.4
PINK1-201ENST00000321556 WRNQ14191 1432 aaPredicted RBP eCLIP36.26■■■■□ 3.4
PINK1-201ENST00000321556 EEA1Q15075 1411 aa36.13■■■■□ 3.37
PINK1-201ENST00000321556 SYNJ1O43426 1573 aa36.09■■■■□ 3.37
PINK1-201ENST00000321556 GOLGA3Q08378 1498 aa36.08■■■■□ 3.37
PINK1-201ENST00000321556 SCAF1Q9H7N4 1312 aaKnown RBP36.05■■■■□ 3.36
PINK1-201ENST00000321556 PEG3Q9GZU2 1588 aa36.05■■■■□ 3.36
PINK1-201ENST00000321556 RANGAP1P46060 587 aaPredicted RBP36.03■■■■□ 3.36
PINK1-201ENST00000321556 ATAD2BQ9ULI0 1458 aa36.01■■■■□ 3.36
PINK1-201ENST00000321556 BAZ1BQ9UIG0 1483 aaKnown RBP35.95■■■■□ 3.35
PINK1-201ENST00000321556 CEP164Q9UPV0 1460 aa35.83■■■■□ 3.33
PINK1-201ENST00000321556 HNRNPUL2Q1KMD3 747 aaKnown RBP35.83■■■■□ 3.33
PINK1-201ENST00000321556 DIEXFQ68CQ4 756 aaKnown RBP35.82■■■■□ 3.33
PINK1-201ENST00000321556 CLIP1P30622 1438 aa35.78■■■■□ 3.32
PINK1-201ENST00000321556 RAPGEF2Q9Y4G8 1499 aa35.74■■■■□ 3.31
PINK1-201ENST00000321556 KIF21BO75037 1637 aa35.72■■■■□ 3.31
PINK1-201ENST00000321556 NEUROD1Q13562 356 aa35.64■■■■□ 3.3
PINK1-201ENST00000321556 VPS8Q8N3P4 1428 aa35.55■■■■□ 3.28
PINK1-201ENST00000321556 ACIN1Q9UKV3 1341 aaKnown RBP35.55■■■■□ 3.28
PINK1-201ENST00000321556 APLP2Q06481 763 aa35.55■■■■□ 3.28
PINK1-201ENST00000321556 TOP2BQ02880 1626 aa35.49■■■■□ 3.27
PINK1-201ENST00000321556 ZNF316A6NFI3 1004 aaPredicted RBP35.45■■■■□ 3.27
PINK1-201ENST00000321556 BIVM-ERCC5R4GMW8 1640 aa35.31■■■■□ 3.24
PINK1-201ENST00000321556 GTF3C3Q9Y5Q9 886 aa35.28■■■■□ 3.24
PINK1-201ENST00000321556 YTHDC1Q96MU7 727 aaKnown RBP35.25■■■■□ 3.23
PINK1-201ENST00000321556 CENPBP07199 599 aaPredicted RBP35.24■■■■□ 3.23
PINK1-201ENST00000321556 CUX1P39880 1505 aa35.24■■■■□ 3.23
PINK1-201ENST00000321556 PELP1Q8IZL8 1130 aaKnown RBP35.23■■■■□ 3.23
PINK1-201ENST00000321556 KANK4Q5T7N3 995 aaPredicted RBP35.21■■■■□ 3.23
PINK1-201ENST00000321556 PRXQ9BXM0 1461 aa35.19■■■■□ 3.22
PINK1-201ENST00000321556 NCAPD3P42695 1498 aa35.17■■■■□ 3.22
PINK1-201ENST00000321556 ARAP1Q96P48 1450 aa35.16■■■■□ 3.22
PINK1-201ENST00000321556 MIER1Q8N108 512 aa35.12■■■■□ 3.21
PINK1-201ENST00000321556 HMGXB3Q12766 1538 aa35.11■■■■□ 3.21
PINK1-201ENST00000321556 ERICH3Q5RHP9 1530 aa35.09■■■■□ 3.21
PINK1-201ENST00000321556 KIF27Q86VH2 1401 aa35.04■■■■□ 3.2
PINK1-201ENST00000321556 CFTRP13569 1480 aa34.98■■■■□ 3.19
PINK1-201ENST00000321556 ITGAEP38570 1179 aa34.93■■■■□ 3.18
PINK1-201ENST00000321556 DHX57Q6P158 1386 aaKnown RBP34.88■■■■□ 3.17
PINK1-201ENST00000321556 ARHGAP35Q9NRY4 1499 aa34.85■■■■□ 3.17
PINK1-201ENST00000321556 CUX2O14529 1486 aa34.8■■■■□ 3.16
PINK1-201ENST00000321556 IGF1RP08069 1367 aa34.72■■■■□ 3.15
PINK1-201ENST00000321556 RRBP1Q9P2E9 1410 aaKnown RBP34.69■■■■□ 3.14
PINK1-201ENST00000321556 CCNB3Q8WWL7 1395 aa34.66■■■■□ 3.14
PINK1-201ENST00000321556 P3H3Q8IVL6 736 aa34.64■■■■□ 3.14
PINK1-201ENST00000321556 CADPSQ9ULU8 1353 aa34.62■■■■□ 3.13
PINK1-201ENST00000321556 FGD5Q6ZNL6 1462 aa34.61■■■■□ 3.13
PINK1-201ENST00000321556 PRDM2Q13029 1718 aa34.6■■■■□ 3.13
PINK1-201ENST00000321556 CARMIL1Q5VZK9 1371 aa34.58■■■■□ 3.13
PINK1-201ENST00000321556 CLSPNQ9HAW4 1339 aa34.58■■■■□ 3.13
PINK1-201ENST00000321556 ATP1B4Q9UN42 357 aaPredicted RBP34.56■■■■□ 3.12
PINK1-201ENST00000321556 RAB3GAP2Q9H2M9 1393 aa34.43■■■■□ 3.1
PINK1-201ENST00000321556 TIAM1Q13009 1591 aa34.42■■■■□ 3.1
PINK1-201ENST00000321556 FAM50AQ14320 339 aaKnown RBP34.41■■■■□ 3.1
PINK1-201ENST00000321556 CC2D2AQ9P2K1 1620 aa34.39■■■■□ 3.1
PINK1-201ENST00000321556 RAD54L2Q9Y4B4 1467 aa34.37■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms