Protein–RNA interactions for Protein: Q9Y5H1

PCDHGA2, Protocadherin gamma-A2, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA2Q9Y5H1 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
PCDHGA2Q9Y5H1 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC26.17■■□□□ 1.78
PCDHGA2Q9Y5H1 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PCDHGA2Q9Y5H1 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
PCDHGA2Q9Y5H1 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC26.16■■□□□ 1.78
PCDHGA2Q9Y5H1 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
PCDHGA2Q9Y5H1 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
PCDHGA2Q9Y5H1 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC26.15■■□□□ 1.78
PCDHGA2Q9Y5H1 U85056.1-201ENST00000616429 682 ntBASIC26.15■■□□□ 1.78
PCDHGA2Q9Y5H1 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
PCDHGA2Q9Y5H1 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC26.14■■□□□ 1.77
PCDHGA2Q9Y5H1 HYI-213ENST00000583037 1322 ntTSL 5 BASIC26.14■■□□□ 1.77
PCDHGA2Q9Y5H1 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
PCDHGA2Q9Y5H1 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC26.13■■□□□ 1.77
PCDHGA2Q9Y5H1 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC26.13■■□□□ 1.77
PCDHGA2Q9Y5H1 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
PCDHGA2Q9Y5H1 TSPY13P-201ENST00000338964 914 ntBASIC26.11■■□□□ 1.77
PCDHGA2Q9Y5H1 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
PCDHGA2Q9Y5H1 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
PCDHGA2Q9Y5H1 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
PCDHGA2Q9Y5H1 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC26.09■■□□□ 1.77
PCDHGA2Q9Y5H1 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PCDHGA2Q9Y5H1 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC26.08■■□□□ 1.77
PCDHGA2Q9Y5H1 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
PCDHGA2Q9Y5H1 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
PCDHGA2Q9Y5H1 GFER-205ENST00000569451 517 ntTSL 5 BASIC26.07■■□□□ 1.76
PCDHGA2Q9Y5H1 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC26.07■■□□□ 1.76
PCDHGA2Q9Y5H1 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC26.07■■□□□ 1.76
PCDHGA2Q9Y5H1 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
PCDHGA2Q9Y5H1 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
PCDHGA2Q9Y5H1 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
PCDHGA2Q9Y5H1 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC26.06■■□□□ 1.76
PCDHGA2Q9Y5H1 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
PCDHGA2Q9Y5H1 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
PCDHGA2Q9Y5H1 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC26.04■■□□□ 1.76
PCDHGA2Q9Y5H1 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
PCDHGA2Q9Y5H1 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
PCDHGA2Q9Y5H1 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC26.04■■□□□ 1.76
PCDHGA2Q9Y5H1 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC26.04■■□□□ 1.76
PCDHGA2Q9Y5H1 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
PCDHGA2Q9Y5H1 RARRES2P1-201ENST00000474487 481 ntBASIC26.03■■□□□ 1.76
PCDHGA2Q9Y5H1 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC26.03■■□□□ 1.76
PCDHGA2Q9Y5H1 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
PCDHGA2Q9Y5H1 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
PCDHGA2Q9Y5H1 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC26.02■■□□□ 1.76
PCDHGA2Q9Y5H1 ATP5G2P3-201ENST00000429083 425 ntBASIC26.02■■□□□ 1.76
PCDHGA2Q9Y5H1 AC004987.1-201ENST00000428627 508 ntBASIC26.01■■□□□ 1.75
PCDHGA2Q9Y5H1 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PCDHGA2Q9Y5H1 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PCDHGA2Q9Y5H1 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PCDHGA2Q9Y5H1 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC26■■□□□ 1.75
PCDHGA2Q9Y5H1 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC26■■□□□ 1.75
PCDHGA2Q9Y5H1 AC060814.1-201ENST00000554326 538 ntBASIC26■■□□□ 1.75
PCDHGA2Q9Y5H1 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC26■■□□□ 1.75
PCDHGA2Q9Y5H1 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
PCDHGA2Q9Y5H1 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC26■■□□□ 1.75
PCDHGA2Q9Y5H1 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
PCDHGA2Q9Y5H1 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PCDHGA2Q9Y5H1 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
PCDHGA2Q9Y5H1 KRT18P60-201ENST00000312876 1297 ntBASIC25.99■■□□□ 1.75
PCDHGA2Q9Y5H1 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC25.98■■□□□ 1.75
PCDHGA2Q9Y5H1 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
PCDHGA2Q9Y5H1 CHST11-203ENST00000547956 936 ntTSL 2 BASIC25.98■■□□□ 1.75
PCDHGA2Q9Y5H1 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC25.98■■□□□ 1.75
PCDHGA2Q9Y5H1 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
PCDHGA2Q9Y5H1 GUK1-208ENST00000366728 842 ntTSL 2 BASIC25.97■■□□□ 1.75
PCDHGA2Q9Y5H1 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
PCDHGA2Q9Y5H1 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
PCDHGA2Q9Y5H1 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
PCDHGA2Q9Y5H1 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
PCDHGA2Q9Y5H1 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
PCDHGA2Q9Y5H1 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
PCDHGA2Q9Y5H1 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
PCDHGA2Q9Y5H1 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
PCDHGA2Q9Y5H1 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC25.95■■□□□ 1.74
PCDHGA2Q9Y5H1 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC25.95■■□□□ 1.74
PCDHGA2Q9Y5H1 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC25.93■■□□□ 1.74
PCDHGA2Q9Y5H1 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
PCDHGA2Q9Y5H1 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
PCDHGA2Q9Y5H1 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC25.93■■□□□ 1.74
PCDHGA2Q9Y5H1 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
PCDHGA2Q9Y5H1 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
PCDHGA2Q9Y5H1 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
PCDHGA2Q9Y5H1 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC25.92■■□□□ 1.74
PCDHGA2Q9Y5H1 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC25.92■■□□□ 1.74
PCDHGA2Q9Y5H1 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
PCDHGA2Q9Y5H1 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
PCDHGA2Q9Y5H1 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
PCDHGA2Q9Y5H1 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PCDHGA2Q9Y5H1 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PCDHGA2Q9Y5H1 AC148477.6-201ENST00000623746 465 ntBASIC25.9■■□□□ 1.74
PCDHGA2Q9Y5H1 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
PCDHGA2Q9Y5H1 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC25.89■■□□□ 1.73
PCDHGA2Q9Y5H1 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PCDHGA2Q9Y5H1 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC25.88■■□□□ 1.73
PCDHGA2Q9Y5H1 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
PCDHGA2Q9Y5H1 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC25.88■■□□□ 1.73
PCDHGA2Q9Y5H1 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PCDHGA2Q9Y5H1 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC25.88■■□□□ 1.73
PCDHGA2Q9Y5H1 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms