Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC27.77■■■□□ 2.04
UBQLN1Q9UMX0 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC27.77■■■□□ 2.04
UBQLN1Q9UMX0 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.04
UBQLN1Q9UMX0 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.03
UBQLN1Q9UMX0 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC27.76■■■□□ 2.03
UBQLN1Q9UMX0 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC27.76■■■□□ 2.03
UBQLN1Q9UMX0 ABCB10P1-201ENST00000614297 2181 ntBASIC27.76■■■□□ 2.03
UBQLN1Q9UMX0 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
UBQLN1Q9UMX0 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC27.75■■■□□ 2.03
UBQLN1Q9UMX0 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
UBQLN1Q9UMX0 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC27.74■■■□□ 2.03
UBQLN1Q9UMX0 AP004833.2-201ENST00000532228 1454 ntBASIC27.74■■■□□ 2.03
UBQLN1Q9UMX0 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC27.74■■■□□ 2.03
UBQLN1Q9UMX0 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
UBQLN1Q9UMX0 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC27.73■■■□□ 2.03
UBQLN1Q9UMX0 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
UBQLN1Q9UMX0 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
UBQLN1Q9UMX0 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC27.73■■■□□ 2.03
UBQLN1Q9UMX0 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC27.73■■■□□ 2.03
UBQLN1Q9UMX0 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC27.72■■■□□ 2.03
UBQLN1Q9UMX0 CHST11-202ENST00000546689 756 ntTSL 2 BASIC27.72■■■□□ 2.03
UBQLN1Q9UMX0 MIR4449-201ENST00000578365 66 ntBASIC27.72■■■□□ 2.03
UBQLN1Q9UMX0 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC27.72■■■□□ 2.03
UBQLN1Q9UMX0 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC27.71■■■□□ 2.03
UBQLN1Q9UMX0 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC27.71■■■□□ 2.03
UBQLN1Q9UMX0 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
UBQLN1Q9UMX0 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC27.7■■■□□ 2.02
UBQLN1Q9UMX0 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
UBQLN1Q9UMX0 MEST-211ENST00000437945 1455 ntTSL 5 BASIC27.7■■■□□ 2.02
UBQLN1Q9UMX0 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC27.69■■■□□ 2.02
UBQLN1Q9UMX0 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
UBQLN1Q9UMX0 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
UBQLN1Q9UMX0 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC27.68■■■□□ 2.02
UBQLN1Q9UMX0 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
UBQLN1Q9UMX0 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC27.68■■■□□ 2.02
UBQLN1Q9UMX0 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
UBQLN1Q9UMX0 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC27.67■■■□□ 2.02
UBQLN1Q9UMX0 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC27.67■■■□□ 2.02
UBQLN1Q9UMX0 METRNL-202ENST00000570778 967 ntTSL 5 BASIC27.67■■■□□ 2.02
UBQLN1Q9UMX0 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC27.67■■■□□ 2.02
UBQLN1Q9UMX0 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
UBQLN1Q9UMX0 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
UBQLN1Q9UMX0 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC27.65■■■□□ 2.02
UBQLN1Q9UMX0 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
UBQLN1Q9UMX0 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
UBQLN1Q9UMX0 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
UBQLN1Q9UMX0 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC27.64■■■□□ 2.01
UBQLN1Q9UMX0 AL139393.2-201ENST00000608721 2025 ntBASIC27.63■■■□□ 2.01
UBQLN1Q9UMX0 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
UBQLN1Q9UMX0 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC27.62■■■□□ 2.01
UBQLN1Q9UMX0 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
UBQLN1Q9UMX0 AC110285.7-201ENST00000624417 1536 ntBASIC27.62■■■□□ 2.01
UBQLN1Q9UMX0 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC27.61■■■□□ 2.01
UBQLN1Q9UMX0 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC27.6■■■□□ 2.01
UBQLN1Q9UMX0 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC27.6■■■□□ 2.01
UBQLN1Q9UMX0 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
UBQLN1Q9UMX0 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
UBQLN1Q9UMX0 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
UBQLN1Q9UMX0 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC27.58■■■□□ 2.01
UBQLN1Q9UMX0 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC27.58■■■□□ 2.01
UBQLN1Q9UMX0 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
UBQLN1Q9UMX0 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC27.57■■■□□ 2
UBQLN1Q9UMX0 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
UBQLN1Q9UMX0 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC27.57■■■□□ 2
UBQLN1Q9UMX0 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC27.57■■■□□ 2
UBQLN1Q9UMX0 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
UBQLN1Q9UMX0 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC27.56■■■□□ 2
UBQLN1Q9UMX0 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC27.56■■■□□ 2
UBQLN1Q9UMX0 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC27.56■■■□□ 2
UBQLN1Q9UMX0 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC27.56■■■□□ 2
UBQLN1Q9UMX0 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC27.55■■■□□ 2
UBQLN1Q9UMX0 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC27.54■■■□□ 2
UBQLN1Q9UMX0 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC27.54■■■□□ 2
UBQLN1Q9UMX0 AC008813.1-201ENST00000536597 885 ntBASIC27.54■■■□□ 2
UBQLN1Q9UMX0 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC27.54■■■□□ 2
UBQLN1Q9UMX0 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
UBQLN1Q9UMX0 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC27.53■■■□□ 2
UBQLN1Q9UMX0 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC27.53■■■□□ 2
UBQLN1Q9UMX0 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC27.53■■■□□ 2
UBQLN1Q9UMX0 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC27.53■■■□□ 2
UBQLN1Q9UMX0 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC27.53■■■□□ 2
UBQLN1Q9UMX0 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC27.52■■■□□ 2
UBQLN1Q9UMX0 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC27.52■■■□□ 2
UBQLN1Q9UMX0 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
UBQLN1Q9UMX0 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC27.52■■■□□ 2
UBQLN1Q9UMX0 AC100797.4-201ENST00000631653 1827 ntBASIC27.52■■■□□ 2
UBQLN1Q9UMX0 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC27.52■■■□□ 2
UBQLN1Q9UMX0 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC27.51■■□□□ 1.99
UBQLN1Q9UMX0 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC27.51■■□□□ 1.99
UBQLN1Q9UMX0 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC27.51■■□□□ 1.99
UBQLN1Q9UMX0 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC27.51■■□□□ 1.99
UBQLN1Q9UMX0 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
UBQLN1Q9UMX0 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
UBQLN1Q9UMX0 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
UBQLN1Q9UMX0 PEX7-203ENST00000541292 945 ntTSL 5 BASIC27.5■■□□□ 1.99
UBQLN1Q9UMX0 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
UBQLN1Q9UMX0 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC27.49■■□□□ 1.99
UBQLN1Q9UMX0 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC27.49■■□□□ 1.99
UBQLN1Q9UMX0 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC27.49■■□□□ 1.99
UBQLN1Q9UMX0 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC27.49■■□□□ 1.99
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms