Protein–RNA interactions for Protein: Q8NG48

LINS1, Protein Lines homolog 1, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINS1Q8NG48 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC32.52■■■□□ 2.8
LINS1Q8NG48 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC32.51■■■□□ 2.79
LINS1Q8NG48 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
LINS1Q8NG48 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC32.5■■■□□ 2.79
LINS1Q8NG48 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
LINS1Q8NG48 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC32.5■■■□□ 2.79
LINS1Q8NG48 ABCB10P1-201ENST00000614297 2181 ntBASIC32.5■■■□□ 2.79
LINS1Q8NG48 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
LINS1Q8NG48 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC32.49■■■□□ 2.79
LINS1Q8NG48 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC32.49■■■□□ 2.79
LINS1Q8NG48 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
LINS1Q8NG48 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC32.48■■■□□ 2.79
LINS1Q8NG48 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC32.48■■■□□ 2.79
LINS1Q8NG48 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
LINS1Q8NG48 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
LINS1Q8NG48 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
LINS1Q8NG48 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
LINS1Q8NG48 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC32.46■■■□□ 2.79
LINS1Q8NG48 AP004833.2-201ENST00000532228 1454 ntBASIC32.46■■■□□ 2.79
LINS1Q8NG48 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC32.45■■■□□ 2.79
LINS1Q8NG48 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC32.45■■■□□ 2.79
LINS1Q8NG48 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC32.45■■■□□ 2.79
LINS1Q8NG48 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC32.44■■■□□ 2.78
LINS1Q8NG48 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC32.44■■■□□ 2.78
LINS1Q8NG48 METRNL-202ENST00000570778 967 ntTSL 5 BASIC32.44■■■□□ 2.78
LINS1Q8NG48 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
LINS1Q8NG48 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
LINS1Q8NG48 CHST11-202ENST00000546689 756 ntTSL 2 BASIC32.43■■■□□ 2.78
LINS1Q8NG48 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
LINS1Q8NG48 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
LINS1Q8NG48 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
LINS1Q8NG48 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC32.42■■■□□ 2.78
LINS1Q8NG48 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
LINS1Q8NG48 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC32.41■■■□□ 2.78
LINS1Q8NG48 MEST-211ENST00000437945 1455 ntTSL 5 BASIC32.41■■■□□ 2.78
LINS1Q8NG48 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC32.4■■■□□ 2.78
LINS1Q8NG48 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
LINS1Q8NG48 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC32.4■■■□□ 2.78
LINS1Q8NG48 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC32.39■■■□□ 2.78
LINS1Q8NG48 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC32.39■■■□□ 2.78
LINS1Q8NG48 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
LINS1Q8NG48 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC32.38■■■□□ 2.77
LINS1Q8NG48 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
LINS1Q8NG48 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC32.36■■■□□ 2.77
LINS1Q8NG48 AL139393.2-201ENST00000608721 2025 ntBASIC32.36■■■□□ 2.77
LINS1Q8NG48 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
LINS1Q8NG48 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
LINS1Q8NG48 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
LINS1Q8NG48 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC32.33■■■□□ 2.77
LINS1Q8NG48 AC110285.7-201ENST00000624417 1536 ntBASIC32.33■■■□□ 2.77
LINS1Q8NG48 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC32.33■■■□□ 2.77
LINS1Q8NG48 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC32.33■■■□□ 2.77
LINS1Q8NG48 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
LINS1Q8NG48 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
LINS1Q8NG48 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
LINS1Q8NG48 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC32.32■■■□□ 2.76
LINS1Q8NG48 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC32.31■■■□□ 2.76
LINS1Q8NG48 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC32.31■■■□□ 2.76
LINS1Q8NG48 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC32.31■■■□□ 2.76
LINS1Q8NG48 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC32.3■■■□□ 2.76
LINS1Q8NG48 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC32.3■■■□□ 2.76
LINS1Q8NG48 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
LINS1Q8NG48 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
LINS1Q8NG48 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC32.28■■■□□ 2.76
LINS1Q8NG48 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
LINS1Q8NG48 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
LINS1Q8NG48 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC32.28■■■□□ 2.76
LINS1Q8NG48 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC32.27■■■□□ 2.76
LINS1Q8NG48 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
LINS1Q8NG48 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
LINS1Q8NG48 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC32.27■■■□□ 2.76
LINS1Q8NG48 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC32.26■■■□□ 2.76
LINS1Q8NG48 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC32.26■■■□□ 2.75
LINS1Q8NG48 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC32.26■■■□□ 2.75
LINS1Q8NG48 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC32.26■■■□□ 2.75
LINS1Q8NG48 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC32.25■■■□□ 2.75
LINS1Q8NG48 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC32.25■■■□□ 2.75
LINS1Q8NG48 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC32.25■■■□□ 2.75
LINS1Q8NG48 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC32.25■■■□□ 2.75
LINS1Q8NG48 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC32.25■■■□□ 2.75
LINS1Q8NG48 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC32.25■■■□□ 2.75
LINS1Q8NG48 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
LINS1Q8NG48 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC32.24■■■□□ 2.75
LINS1Q8NG48 PEX7-203ENST00000541292 945 ntTSL 5 BASIC32.24■■■□□ 2.75
LINS1Q8NG48 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC32.24■■■□□ 2.75
LINS1Q8NG48 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC32.24■■■□□ 2.75
LINS1Q8NG48 AC100797.4-201ENST00000631653 1827 ntBASIC32.23■■■□□ 2.75
LINS1Q8NG48 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
LINS1Q8NG48 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
LINS1Q8NG48 AC008813.1-201ENST00000536597 885 ntBASIC32.23■■■□□ 2.75
LINS1Q8NG48 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC32.22■■■□□ 2.75
LINS1Q8NG48 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC32.22■■■□□ 2.75
LINS1Q8NG48 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC32.22■■■□□ 2.75
LINS1Q8NG48 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC32.22■■■□□ 2.75
LINS1Q8NG48 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
LINS1Q8NG48 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
LINS1Q8NG48 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
LINS1Q8NG48 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC32.2■■■□□ 2.75
LINS1Q8NG48 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC32.2■■■□□ 2.75
LINS1Q8NG48 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC32.19■■■□□ 2.74
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms