Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC31.68■■■□□ 2.66
ATP2B3Q16720 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
ATP2B3Q16720 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC31.67■■■□□ 2.66
ATP2B3Q16720 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC31.67■■■□□ 2.66
ATP2B3Q16720 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC31.66■■■□□ 2.66
ATP2B3Q16720 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
ATP2B3Q16720 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
ATP2B3Q16720 METRNL-202ENST00000570778 967 ntTSL 5 BASIC31.65■■■□□ 2.66
ATP2B3Q16720 CHST11-202ENST00000546689 756 ntTSL 2 BASIC31.64■■■□□ 2.66
ATP2B3Q16720 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC31.63■■■□□ 2.65
ATP2B3Q16720 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
ATP2B3Q16720 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC31.63■■■□□ 2.65
ATP2B3Q16720 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
ATP2B3Q16720 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
ATP2B3Q16720 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC31.61■■■□□ 2.65
ATP2B3Q16720 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC31.6■■■□□ 2.65
ATP2B3Q16720 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC31.6■■■□□ 2.65
ATP2B3Q16720 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC31.59■■■□□ 2.65
ATP2B3Q16720 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC31.58■■■□□ 2.65
ATP2B3Q16720 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
ATP2B3Q16720 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC31.58■■■□□ 2.65
ATP2B3Q16720 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC31.58■■■□□ 2.65
ATP2B3Q16720 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
ATP2B3Q16720 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC31.57■■■□□ 2.64
ATP2B3Q16720 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
ATP2B3Q16720 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
ATP2B3Q16720 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC31.56■■■□□ 2.64
ATP2B3Q16720 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC31.55■■■□□ 2.64
ATP2B3Q16720 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
ATP2B3Q16720 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC31.55■■■□□ 2.64
ATP2B3Q16720 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC31.55■■■□□ 2.64
ATP2B3Q16720 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC31.54■■■□□ 2.64
ATP2B3Q16720 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC31.54■■■□□ 2.64
ATP2B3Q16720 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
ATP2B3Q16720 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
ATP2B3Q16720 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
ATP2B3Q16720 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC31.53■■■□□ 2.64
ATP2B3Q16720 ABCB10P1-201ENST00000614297 2181 ntBASIC31.53■■■□□ 2.64
ATP2B3Q16720 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
ATP2B3Q16720 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC31.53■■■□□ 2.64
ATP2B3Q16720 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC31.52■■■□□ 2.64
ATP2B3Q16720 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC31.52■■■□□ 2.64
ATP2B3Q16720 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
ATP2B3Q16720 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC31.51■■■□□ 2.63
ATP2B3Q16720 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC31.5■■■□□ 2.63
ATP2B3Q16720 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
ATP2B3Q16720 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC31.49■■■□□ 2.63
ATP2B3Q16720 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
ATP2B3Q16720 MEST-211ENST00000437945 1455 ntTSL 5 BASIC31.48■■■□□ 2.63
ATP2B3Q16720 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC31.48■■■□□ 2.63
ATP2B3Q16720 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC31.48■■■□□ 2.63
ATP2B3Q16720 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC31.48■■■□□ 2.63
ATP2B3Q16720 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC31.48■■■□□ 2.63
ATP2B3Q16720 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
ATP2B3Q16720 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC31.48■■■□□ 2.63
ATP2B3Q16720 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC31.47■■■□□ 2.63
ATP2B3Q16720 AC110285.7-201ENST00000624417 1536 ntBASIC31.47■■■□□ 2.63
ATP2B3Q16720 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC31.47■■■□□ 2.63
ATP2B3Q16720 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC31.47■■■□□ 2.63
ATP2B3Q16720 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
ATP2B3Q16720 AP004833.2-201ENST00000532228 1454 ntBASIC31.46■■■□□ 2.63
ATP2B3Q16720 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
ATP2B3Q16720 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
ATP2B3Q16720 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC31.45■■■□□ 2.63
ATP2B3Q16720 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
ATP2B3Q16720 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
ATP2B3Q16720 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
ATP2B3Q16720 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC31.43■■■□□ 2.62
ATP2B3Q16720 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
ATP2B3Q16720 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC31.43■■■□□ 2.62
ATP2B3Q16720 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
ATP2B3Q16720 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC31.42■■■□□ 2.62
ATP2B3Q16720 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC31.42■■■□□ 2.62
ATP2B3Q16720 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
ATP2B3Q16720 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC31.41■■■□□ 2.62
ATP2B3Q16720 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC31.41■■■□□ 2.62
ATP2B3Q16720 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC31.4■■■□□ 2.62
ATP2B3Q16720 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC31.4■■■□□ 2.62
ATP2B3Q16720 AL139393.2-201ENST00000608721 2025 ntBASIC31.4■■■□□ 2.62
ATP2B3Q16720 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC31.4■■■□□ 2.62
ATP2B3Q16720 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC31.39■■■□□ 2.62
ATP2B3Q16720 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
ATP2B3Q16720 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
ATP2B3Q16720 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC31.37■■■□□ 2.61
ATP2B3Q16720 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC31.37■■■□□ 2.61
ATP2B3Q16720 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC31.37■■■□□ 2.61
ATP2B3Q16720 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC31.37■■■□□ 2.61
ATP2B3Q16720 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC31.36■■■□□ 2.61
ATP2B3Q16720 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC31.36■■■□□ 2.61
ATP2B3Q16720 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
ATP2B3Q16720 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
ATP2B3Q16720 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
ATP2B3Q16720 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
ATP2B3Q16720 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
ATP2B3Q16720 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
ATP2B3Q16720 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
ATP2B3Q16720 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
ATP2B3Q16720 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC31.35■■■□□ 2.61
ATP2B3Q16720 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC31.35■■■□□ 2.61
ATP2B3Q16720 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC31.35■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 182.8 ms