Protein–RNA interactions for Protein: O14817

TSPAN4, Tetraspanin-4, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4O14817 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
TSPAN4O14817 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.16■□□□□ 0.98
TSPAN4O14817 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TSPAN4O14817 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TSPAN4O14817 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TSPAN4O14817 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TSPAN4O14817 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.16■□□□□ 0.98
TSPAN4O14817 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.16■□□□□ 0.98
TSPAN4O14817 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.16■□□□□ 0.98
TSPAN4O14817 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TSPAN4O14817 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TSPAN4O14817 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TSPAN4O14817 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
TSPAN4O14817 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TSPAN4O14817 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TSPAN4O14817 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
TSPAN4O14817 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TSPAN4O14817 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC21.14■□□□□ 0.97
TSPAN4O14817 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TSPAN4O14817 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TSPAN4O14817 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.14■□□□□ 0.97
TSPAN4O14817 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TSPAN4O14817 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
TSPAN4O14817 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TSPAN4O14817 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC21.13■□□□□ 0.97
TSPAN4O14817 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC21.13■□□□□ 0.97
TSPAN4O14817 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TSPAN4O14817 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TSPAN4O14817 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TSPAN4O14817 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TSPAN4O14817 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TSPAN4O14817 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TSPAN4O14817 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.13■□□□□ 0.97
TSPAN4O14817 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.12■□□□□ 0.97
TSPAN4O14817 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
TSPAN4O14817 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TSPAN4O14817 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC21.12■□□□□ 0.97
TSPAN4O14817 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC21.12■□□□□ 0.97
TSPAN4O14817 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TSPAN4O14817 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TSPAN4O14817 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TSPAN4O14817 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.11■□□□□ 0.97
TSPAN4O14817 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC21.11■□□□□ 0.97
TSPAN4O14817 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
TSPAN4O14817 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TSPAN4O14817 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TSPAN4O14817 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TSPAN4O14817 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.1■□□□□ 0.97
TSPAN4O14817 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TSPAN4O14817 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TSPAN4O14817 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TSPAN4O14817 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TSPAN4O14817 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TSPAN4O14817 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TSPAN4O14817 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TSPAN4O14817 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TSPAN4O14817 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
TSPAN4O14817 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
TSPAN4O14817 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC21.08■□□□□ 0.96
TSPAN4O14817 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
TSPAN4O14817 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TSPAN4O14817 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
TSPAN4O14817 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.06■□□□□ 0.96
TSPAN4O14817 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TSPAN4O14817 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TSPAN4O14817 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC21.05■□□□□ 0.96
TSPAN4O14817 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TSPAN4O14817 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TSPAN4O14817 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TSPAN4O14817 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
TSPAN4O14817 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TSPAN4O14817 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TSPAN4O14817 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TSPAN4O14817 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.03■□□□□ 0.96
TSPAN4O14817 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TSPAN4O14817 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TSPAN4O14817 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TSPAN4O14817 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TSPAN4O14817 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC21.02■□□□□ 0.96
TSPAN4O14817 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TSPAN4O14817 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC21.01■□□□□ 0.95
TSPAN4O14817 AC120057.4-201ENST00000624722 1615 ntBASIC21■□□□□ 0.95
TSPAN4O14817 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21■□□□□ 0.95
TSPAN4O14817 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21■□□□□ 0.95
TSPAN4O14817 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
TSPAN4O14817 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TSPAN4O14817 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.99■□□□□ 0.95
TSPAN4O14817 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
TSPAN4O14817 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TSPAN4O14817 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
TSPAN4O14817 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TSPAN4O14817 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TSPAN4O14817 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
TSPAN4O14817 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TSPAN4O14817 ST7-AS1-201ENST00000456775 1889 ntBASIC20.97■□□□□ 0.95
TSPAN4O14817 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TSPAN4O14817 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TSPAN4O14817 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.96■□□□□ 0.95
TSPAN4O14817 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TSPAN4O14817 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms