RNA–Protein interactions for RNA: ENST00000601953.5

CAPN12-212, Transcript of calpain 12, humanhuman

TSL 5 BASIC

Gene CAPN12, Length 2,381 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-212ENST00000601953 NISCHQ9Y2I1 1504 aa46.27■■■■■ 5
CAPN12-212ENST00000601953 CCDC180Q9P1Z9 1646 aa39.7■■■■□ 3.95
CAPN12-212ENST00000601953 ZCCHC6Q5VYS8 1495 aaKnown RBP39.1■■■■□ 3.85
CAPN12-212ENST00000601953 SHROOM4Q9ULL8 1493 aa38.71■■■■□ 3.79
CAPN12-212ENST00000601953 DCAF1Q9Y4B6 1507 aa38.19■■■■□ 3.7
CAPN12-212ENST00000601953 DCAF8L2P0C7V8 631 aa37.99■■■■□ 3.67
CAPN12-212ENST00000601953 SUPT5HO00267 1087 aaKnown RBP37.81■■■■□ 3.64
CAPN12-212ENST00000601953 MYO15BQ96JP2 1530 aa37.28■■■■□ 3.56
CAPN12-212ENST00000601953 HRCP23327 699 aa37.22■■■■□ 3.55
CAPN12-212ENST00000601953 SCRIBQ14160 1630 aa36.81■■■■□ 3.48
CAPN12-212ENST00000601953 ABCC9O60706 1549 aa36.81■■■■□ 3.48
CAPN12-212ENST00000601953 CHIC1Q5VXU3 224 aa36.78■■■■□ 3.48
CAPN12-212ENST00000601953 NACADO15069 1562 aa36.74■■■■□ 3.47
CAPN12-212ENST00000601953 PELP1Q8IZL8 1130 aaKnown RBP36.42■■■■□ 3.42
CAPN12-212ENST00000601953 RSF1Q96T23 1441 aaPredicted RBP36.4■■■■□ 3.42
CAPN12-212ENST00000601953 RB1CC1Q8TDY2 1594 aa36.16■■■■□ 3.38
CAPN12-212ENST00000601953 PCGF6Q9BYE7 350 aa36.13■■■■□ 3.38
CAPN12-212ENST00000601953 PPARGC1BQ86YN6 1023 aaKnown RBP36.1■■■■□ 3.37
CAPN12-212ENST00000601953 CECR2Q9BXF3 1484 aa35.95■■■■□ 3.35
CAPN12-212ENST00000601953 MROH2BQ7Z745 1585 aa35.85■■■■□ 3.33
CAPN12-212ENST00000601953 BAZ1AQ9NRL2 1556 aaPredicted RBP35.61■■■■□ 3.29
CAPN12-212ENST00000601953 WIZO95785 1651 aa35.6■■■■□ 3.29
CAPN12-212ENST00000601953 UNC13AQ9UPW8 1703 aa35.53■■■■□ 3.28
CAPN12-212ENST00000601953 LOC105371045A0A1W2PR82 267 aa35.47■■■■□ 3.27
CAPN12-212ENST00000601953 TRIM41Q8WV44 630 aa35.41■■■■□ 3.26
CAPN12-212ENST00000601953 SMARCA4P51532 1647 aa35.31■■■■□ 3.24
CAPN12-212ENST00000601953 TOP2AP11388 1531 aaKnown RBP35.2■■■■□ 3.23
CAPN12-212ENST00000601953 TRIM26Q12899 539 aaPredicted RBP35.19■■■■□ 3.22
CAPN12-212ENST00000601953 SCAF1Q9H7N4 1312 aaKnown RBP35.18■■■■□ 3.22
CAPN12-212ENST00000601953 MYT1Q01538 1121 aa35.16■■■■□ 3.22
CAPN12-212ENST00000601953 BICRAQ9NZM4 1560 aa35.14■■■■□ 3.22
CAPN12-212ENST00000601953 EIF4G1Q04637 1599 aaKnown RBP35.13■■■■□ 3.21
CAPN12-212ENST00000601953 ZEB1P37275 1124 aaPredicted RBP35.12■■■■□ 3.21
CAPN12-212ENST00000601953 SMARCA2P51531 1590 aa34.94■■■■□ 3.18
CAPN12-212ENST00000601953 CCDC88BA6NC98 1476 aa34.93■■■■□ 3.18
CAPN12-212ENST00000601953 PABPN1Q86U42 306 aaKnown RBP eCLIP34.91■■■■□ 3.183e-7■■■■□ 22.5
CAPN12-212ENST00000601953 FAM9AQ8IZU1 332 aaPredicted RBP34.87■■■■□ 3.17
CAPN12-212ENST00000601953 PEG3Q9GZU2 1588 aa34.81■■■■□ 3.16
CAPN12-212ENST00000601953 ABCC8Q09428 1581 aa34.6■■■■□ 3.13
CAPN12-212ENST00000601953 ATAD2BQ9ULI0 1458 aa34.48■■■■□ 3.11
CAPN12-212ENST00000601953 EHMT2Q96KQ7 1210 aa34.38■■■■□ 3.09
CAPN12-212ENST00000601953 ACIN1Q9UKV3 1341 aaKnown RBP34.38■■■■□ 3.09
CAPN12-212ENST00000601953 BAZ1BQ9UIG0 1483 aaKnown RBP34.34■■■■□ 3.09
CAPN12-212ENST00000601953 EEA1Q15075 1411 aa34.26■■■■□ 3.07
CAPN12-212ENST00000601953 SOGA1O94964 1423 aa34.21■■■■□ 3.07
CAPN12-212ENST00000601953 WRNQ14191 1432 aaPredicted RBP eCLIP34.2■■■■□ 3.07
CAPN12-212ENST00000601953 NEUROD1Q13562 356 aa34.14■■■■□ 3.06
CAPN12-212ENST00000601953 CSRNP3Q8WYN3 585 aa34.05■■■■□ 3.04
CAPN12-212ENST00000601953 RUSC2Q8N2Y8 1516 aa34.03■■■■□ 3.04
CAPN12-212ENST00000601953 SYNJ1O43426 1573 aa34.02■■■■□ 3.04
CAPN12-212ENST00000601953 TNIKQ9UKE5 1360 aa34.01■■■■□ 3.04
CAPN12-212ENST00000601953 GTF3C3Q9Y5Q9 886 aa33.98■■■■□ 3.03
CAPN12-212ENST00000601953 HMGXB3Q12766 1538 aa33.97■■■■□ 3.03
CAPN12-212ENST00000601953 NCAPD3P42695 1498 aa33.97■■■■□ 3.03
CAPN12-212ENST00000601953 CENPBP07199 599 aaPredicted RBP33.97■■■■□ 3.03
CAPN12-212ENST00000601953 CEP162Q5TB80 1403 aa33.94■■■■□ 3.02
CAPN12-212ENST00000601953 GOLGA3Q08378 1498 aa33.88■■■■□ 3.01
CAPN12-212ENST00000601953 KIF21BO75037 1637 aa33.76■■■■□ 3
CAPN12-212ENST00000601953 TOP2BQ02880 1626 aa33.75■■■□□ 2.99
CAPN12-212ENST00000601953 CEP164Q9UPV0 1460 aa33.75■■■□□ 2.99
CAPN12-212ENST00000601953 UBTFP17480 764 aaKnown RBP33.74■■■□□ 2.99
CAPN12-212ENST00000601953 BIVM-ERCC5R4GMW8 1640 aa33.67■■■□□ 2.98
CAPN12-212ENST00000601953 DIEXFQ68CQ4 756 aaKnown RBP33.64■■■□□ 2.98
CAPN12-212ENST00000601953 CFTRP13569 1480 aa33.55■■■□□ 2.96
CAPN12-212ENST00000601953 CCER1Q8TC90 406 aaPredicted RBP33.45■■■□□ 2.95
CAPN12-212ENST00000601953 RAPGEF2Q9Y4G8 1499 aa33.44■■■□□ 2.94
CAPN12-212ENST00000601953 CUX1P39880 1505 aa33.43■■■□□ 2.94
CAPN12-212ENST00000601953 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.41■■■□□ 2.94
CAPN12-212ENST00000601953 CLIP1P30622 1438 aa33.41■■■□□ 2.94
CAPN12-212ENST00000601953 PRDM2Q13029 1718 aa33.33■■■□□ 2.93
CAPN12-212ENST00000601953 ERICH3Q5RHP9 1530 aa33.32■■■□□ 2.92
CAPN12-212ENST00000601953 PRXQ9BXM0 1461 aa33.3■■■□□ 2.92
CAPN12-212ENST00000601953 VPS8Q8N3P4 1428 aa33.27■■■□□ 2.92
CAPN12-212ENST00000601953 TTBK1Q5TCY1 1321 aaPredicted RBP33.23■■■□□ 2.91
CAPN12-212ENST00000601953 KIF27Q86VH2 1401 aa33.21■■■□□ 2.91
CAPN12-212ENST00000601953 CADPSQ9ULU8 1353 aa33.2■■■□□ 2.91
CAPN12-212ENST00000601953 CC2D2AQ9P2K1 1620 aa33.18■■■□□ 2.9
CAPN12-212ENST00000601953 ZNF316A6NFI3 1004 aaPredicted RBP33.02■■■□□ 2.88
CAPN12-212ENST00000601953 APLP2Q06481 763 aa32.96■■■□□ 2.87
CAPN12-212ENST00000601953 ARAP1Q96P48 1450 aa32.94■■■□□ 2.86
CAPN12-212ENST00000601953 RANGAP1P46060 587 aaPredicted RBP32.91■■■□□ 2.86
CAPN12-212ENST00000601953 CUX2O14529 1486 aa32.89■■■□□ 2.86
CAPN12-212ENST00000601953 FGD5Q6ZNL6 1462 aa32.87■■■□□ 2.85
CAPN12-212ENST00000601953 IGF1RP08069 1367 aa32.85■■■□□ 2.85
CAPN12-212ENST00000601953 YTHDC1Q96MU7 727 aaKnown RBP32.84■■■□□ 2.85
CAPN12-212ENST00000601953 FANCD2Q9BXW9 1451 aa32.84■■■□□ 2.85
CAPN12-212ENST00000601953 ARHGAP35Q9NRY4 1499 aa32.72■■■□□ 2.83
CAPN12-212ENST00000601953 DNMBPQ6XZF7 1577 aa32.71■■■□□ 2.83
CAPN12-212ENST00000601953 CLSPNQ9HAW4 1339 aa32.7■■■□□ 2.83
CAPN12-212ENST00000601953 MIER1Q8N108 512 aa32.69■■■□□ 2.82
CAPN12-212ENST00000601953 CARMIL1Q5VZK9 1371 aa32.69■■■□□ 2.82
CAPN12-212ENST00000601953 HNRNPUL2Q1KMD3 747 aaKnown RBP32.67■■■□□ 2.82
CAPN12-212ENST00000601953 TOPBP1Q92547 1522 aa32.61■■■□□ 2.81
CAPN12-212ENST00000601953 NESP48681 1621 aa32.6■■■□□ 2.81
CAPN12-212ENST00000601953 ABCA10Q8WWZ4 1543 aa32.59■■■□□ 2.81
CAPN12-212ENST00000601953 LAMC3Q9Y6N6 1575 aa32.58■■■□□ 2.81
CAPN12-212ENST00000601953 KANK4Q5T7N3 995 aaPredicted RBP32.56■■■□□ 2.8
CAPN12-212ENST00000601953 POLA1P09884 1462 aaPredicted RBP32.56■■■□□ 2.8
CAPN12-212ENST00000601953 ANP32EQ9BTT0 268 aa32.53■■■□□ 2.8
CAPN12-212ENST00000601953 RAD54L2Q9Y4B4 1467 aa32.5■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms