RNA–Protein interactions for RNA: ENST00000395423.7

TCF3-203, Transcript of transcription factor 3, humanhuman

TSL 5 BASIC

Gene TCF3, Length 2,779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-203ENST00000395423 NISCHQ9Y2I1 1504 aa43.93■■■■■ 4.62
TCF3-203ENST00000395423 SHROOM4Q9ULL8 1493 aa37.84■■■■□ 3.65
TCF3-203ENST00000395423 SUPT5HO00267 1087 aaKnown RBP37.36■■■■□ 3.57
TCF3-203ENST00000395423 HRCP23327 699 aa37.34■■■■□ 3.57
TCF3-203ENST00000395423 CCDC180Q9P1Z9 1646 aa37.19■■■■□ 3.54
TCF3-203ENST00000395423 DCAF8L2P0C7V8 631 aa37.16■■■■□ 3.54
TCF3-203ENST00000395423 ZCCHC6Q5VYS8 1495 aaKnown RBP37.05■■■■□ 3.52
TCF3-203ENST00000395423 PCGF6Q9BYE7 350 aa36.84■■■■□ 3.49
TCF3-203ENST00000395423 PPARGC1BQ86YN6 1023 aaKnown RBP36.8■■■■□ 3.48
TCF3-203ENST00000395423 MYO15BQ96JP2 1530 aa36.75■■■■□ 3.47
TCF3-203ENST00000395423 CHIC1Q5VXU3 224 aa36.54■■■■□ 3.44
TCF3-203ENST00000395423 LOC105371045A0A1W2PR82 267 aa35.83■■■■□ 3.33
TCF3-203ENST00000395423 DCAF1Q9Y4B6 1507 aa35.76■■■■□ 3.32
TCF3-203ENST00000395423 TRIM26Q12899 539 aaPredicted RBP35.53■■■■□ 3.28
TCF3-203ENST00000395423 PELP1Q8IZL8 1130 aaKnown RBP35.53■■■■□ 3.28
TCF3-203ENST00000395423 SCAF1Q9H7N4 1312 aaKnown RBP35.3■■■■□ 3.24
TCF3-203ENST00000395423 SCRIBQ14160 1630 aa35.25■■■■□ 3.23
TCF3-203ENST00000395423 ABCC9O60706 1549 aa35.22■■■■□ 3.23
TCF3-203ENST00000395423 ZEB1P37275 1124 aaPredicted RBP35.08■■■■□ 3.21
TCF3-203ENST00000395423 RSF1Q96T23 1441 aaPredicted RBP34.78■■■■□ 3.16
TCF3-203ENST00000395423 FAM9AQ8IZU1 332 aaPredicted RBP34.62■■■■□ 3.13
TCF3-203ENST00000395423 EHMT2Q96KQ7 1210 aa34.61■■■■□ 3.13
TCF3-203ENST00000395423 NACADO15069 1562 aa34.55■■■■□ 3.12
TCF3-203ENST00000395423 CECR2Q9BXF3 1484 aa34.51■■■■□ 3.12
TCF3-203ENST00000395423 TRIM41Q8WV44 630 aa34.45■■■■□ 3.11
TCF3-203ENST00000395423 ACIN1Q9UKV3 1341 aaKnown RBP34.43■■■■□ 3.1
TCF3-203ENST00000395423 NEUROD1Q13562 356 aa34.43■■■■□ 3.1
TCF3-203ENST00000395423 RB1CC1Q8TDY2 1594 aa34.41■■■■□ 3.1
TCF3-203ENST00000395423 MROH2BQ7Z745 1585 aa34.27■■■■□ 3.08
TCF3-203ENST00000395423 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.23■■■■□ 3.07
TCF3-203ENST00000395423 GTF3C3Q9Y5Q9 886 aa34.23■■■■□ 3.07
TCF3-203ENST00000395423 CCER1Q8TC90 406 aaPredicted RBP34.1■■■■□ 3.05
TCF3-203ENST00000395423 WIZO95785 1651 aa34.09■■■■□ 3.05
TCF3-203ENST00000395423 DIEXFQ68CQ4 756 aaKnown RBP34■■■■□ 3.03
TCF3-203ENST00000395423 CENPBP07199 599 aaPredicted RBP33.99■■■■□ 3.03
TCF3-203ENST00000395423 MYT1Q01538 1121 aa33.99■■■■□ 3.03
TCF3-203ENST00000395423 PABPN1Q86U42 306 aaKnown RBP eCLIP33.83■■■■□ 3.011e-6■□□□□ 9.3
TCF3-203ENST00000395423 TTBK1Q5TCY1 1321 aaPredicted RBP33.72■■■□□ 2.99
TCF3-203ENST00000395423 BAZ1AQ9NRL2 1556 aaPredicted RBP33.7■■■□□ 2.99
TCF3-203ENST00000395423 UNC13AQ9UPW8 1703 aa33.67■■■□□ 2.98
TCF3-203ENST00000395423 YTHDC1Q96MU7 727 aaKnown RBP33.61■■■□□ 2.97
TCF3-203ENST00000395423 SMARCA4P51532 1647 aa33.49■■■□□ 2.95
TCF3-203ENST00000395423 CCDC88BA6NC98 1476 aa33.39■■■□□ 2.94
TCF3-203ENST00000395423 TOP2AP11388 1531 aaKnown RBP33.35■■■□□ 2.93
TCF3-203ENST00000395423 ABCC8Q09428 1581 aa33.34■■■□□ 2.93
TCF3-203ENST00000395423 ZNF316A6NFI3 1004 aaPredicted RBP33.34■■■□□ 2.93
TCF3-203ENST00000395423 BICRAQ9NZM4 1560 aa33.28■■■□□ 2.92
TCF3-203ENST00000395423 EIF4G1Q04637 1599 aaKnown RBP33.27■■■□□ 2.92
TCF3-203ENST00000395423 SMARCA2P51531 1590 aa33.24■■■□□ 2.91
TCF3-203ENST00000395423 MIER1Q8N108 512 aa33.2■■■□□ 2.9
TCF3-203ENST00000395423 SOGA1O94964 1423 aa33■■■□□ 2.87
TCF3-203ENST00000395423 WRNQ14191 1432 aaPredicted RBP eCLIP32.95■■■□□ 2.871e-6■■■■■ 58.5
TCF3-203ENST00000395423 CEP162Q5TB80 1403 aa32.95■■■□□ 2.87
TCF3-203ENST00000395423 RUSC2Q8N2Y8 1516 aa32.89■■■□□ 2.86
TCF3-203ENST00000395423 HNRNPUL2Q1KMD3 747 aaKnown RBP32.84■■■□□ 2.85
TCF3-203ENST00000395423 UBTFP17480 764 aaKnown RBP32.77■■■□□ 2.84
TCF3-203ENST00000395423 ATAD2BQ9ULI0 1458 aa32.76■■■□□ 2.83
TCF3-203ENST00000395423 CSRNP3Q8WYN3 585 aa32.74■■■□□ 2.83
TCF3-203ENST00000395423 BAZ1BQ9UIG0 1483 aaKnown RBP32.68■■■□□ 2.82
TCF3-203ENST00000395423 PEG3Q9GZU2 1588 aa32.68■■■□□ 2.82
TCF3-203ENST00000395423 TNIKQ9UKE5 1360 aa32.66■■■□□ 2.82
TCF3-203ENST00000395423 SUPT16HQ9Y5B9 1047 aaKnown RBP32.57■■■□□ 2.8
TCF3-203ENST00000395423 SYNJ1O43426 1573 aa32.52■■■□□ 2.8
TCF3-203ENST00000395423 RANGAP1P46060 587 aaPredicted RBP32.5■■■□□ 2.79
TCF3-203ENST00000395423 EEA1Q15075 1411 aa32.4■■■□□ 2.78
TCF3-203ENST00000395423 TSHZ2Q9NRE2 1034 aa32.38■■■□□ 2.77
TCF3-203ENST00000395423 GOLGA3Q08378 1498 aa32.33■■■□□ 2.77
TCF3-203ENST00000395423 ANP32EQ9BTT0 268 aa32.3■■■□□ 2.76
TCF3-203ENST00000395423 CLSPNQ9HAW4 1339 aa32.24■■■□□ 2.75
TCF3-203ENST00000395423 APLP2Q06481 763 aa32.17■■■□□ 2.74
TCF3-203ENST00000395423 CEP164Q9UPV0 1460 aa32.15■■■□□ 2.74
TCF3-203ENST00000395423 RAPGEF2Q9Y4G8 1499 aa32.15■■■□□ 2.74
TCF3-203ENST00000395423 BCL11AQ9H165 835 aa32.14■■■□□ 2.74
TCF3-203ENST00000395423 CLIP1P30622 1438 aa32.1■■■□□ 2.73
TCF3-203ENST00000395423 BCANQ96GW7 911 aa32.1■■■□□ 2.73
TCF3-203ENST00000395423 NCAPD3P42695 1498 aa32.07■■■□□ 2.72
TCF3-203ENST00000395423 KCNH8Q96L42 1107 aa32.02■■■□□ 2.72
TCF3-203ENST00000395423 TOP2BQ02880 1626 aa32■■■□□ 2.71
TCF3-203ENST00000395423 KIF21BO75037 1637 aa32■■■□□ 2.71
TCF3-203ENST00000395423 VPS8Q8N3P4 1428 aa31.99■■■□□ 2.71
TCF3-203ENST00000395423 DHX57Q6P158 1386 aaKnown RBP31.99■■■□□ 2.71
TCF3-203ENST00000395423 HMGXB3Q12766 1538 aa31.94■■■□□ 2.7
TCF3-203ENST00000395423 CUX1P39880 1505 aa31.88■■■□□ 2.69
TCF3-203ENST00000395423 FKBP8Q14318 412 aa31.83■■■□□ 2.69
TCF3-203ENST00000395423 BIVM-ERCC5R4GMW8 1640 aa31.81■■■□□ 2.68
TCF3-203ENST00000395423 CFTRP13569 1480 aa31.78■■■□□ 2.68
TCF3-203ENST00000395423 PRXQ9BXM0 1461 aa31.68■■■□□ 2.66
TCF3-203ENST00000395423 KANK4Q5T7N3 995 aaPredicted RBP31.68■■■□□ 2.66
TCF3-203ENST00000395423 KIF27Q86VH2 1401 aa31.65■■■□□ 2.66
TCF3-203ENST00000395423 ITGAEP38570 1179 aa31.65■■■□□ 2.66
TCF3-203ENST00000395423 RBM19Q9Y4C8 960 aaKnown RBP31.64■■■□□ 2.66
TCF3-203ENST00000395423 CADPSQ9ULU8 1353 aa31.56■■■□□ 2.64
TCF3-203ENST00000395423 DDX10Q13206 875 aaKnown RBP31.55■■■□□ 2.64
TCF3-203ENST00000395423 ARAP1Q96P48 1450 aa31.53■■■□□ 2.64
TCF3-203ENST00000395423 CC2D2AQ9P2K1 1620 aa31.52■■■□□ 2.64
TCF3-203ENST00000395423 ERICH3Q5RHP9 1530 aa31.51■■■□□ 2.64
TCF3-203ENST00000395423 CUX2O14529 1486 aa31.51■■■□□ 2.63
TCF3-203ENST00000395423 NEFLP07196 543 aa31.5■■■□□ 2.63
TCF3-203ENST00000395423 TRIM52Q96A61 297 aa31.46■■■□□ 2.63
TCF3-203ENST00000395423 IGF1RP08069 1367 aa31.41■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms