RNA–Protein interactions for RNA: ENST00000622483.4

PCSK6-220, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 3,132 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-220ENST00000622483 NISCHQ9Y2I1 1504 aa43.02■■■■■ 4.48
PCSK6-220ENST00000622483 DCAF8L2P0C7V8 631 aa37.25■■■■□ 3.55
PCSK6-220ENST00000622483 SHROOM4Q9ULL8 1493 aa36.8■■■■□ 3.48
PCSK6-220ENST00000622483 HRCP23327 699 aa36.76■■■■□ 3.48
PCSK6-220ENST00000622483 CCDC180Q9P1Z9 1646 aa36.67■■■■□ 3.46
PCSK6-220ENST00000622483 PPARGC1BQ86YN6 1023 aaKnown RBP36.59■■■■□ 3.45
PCSK6-220ENST00000622483 SUPT5HO00267 1087 aaKnown RBP36.47■■■■□ 3.43
PCSK6-220ENST00000622483 PCGF6Q9BYE7 350 aa36.38■■■■□ 3.41
PCSK6-220ENST00000622483 ZCCHC6Q5VYS8 1495 aaKnown RBP36.05■■■■□ 3.36
PCSK6-220ENST00000622483 ABCC9O60706 1549 aa36■■■■□ 3.35
PCSK6-220ENST00000622483 MYO15BQ96JP2 1530 aa35.77■■■■□ 3.32
PCSK6-220ENST00000622483 CHIC1Q5VXU3 224 aa35.48■■■■□ 3.27
PCSK6-220ENST00000622483 PELP1Q8IZL8 1130 aaKnown RBP35.32■■■■□ 3.24
PCSK6-220ENST00000622483 SCAF1Q9H7N4 1312 aaKnown RBP35.11■■■■□ 3.21
PCSK6-220ENST00000622483 LOC105371045A0A1W2PR82 267 aa35.1■■■■□ 3.21
PCSK6-220ENST00000622483 SCRIBQ14160 1630 aa34.9■■■■□ 3.18
PCSK6-220ENST00000622483 DCAF1Q9Y4B6 1507 aa34.84■■■■□ 3.17
PCSK6-220ENST00000622483 TRIM26Q12899 539 aaPredicted RBP34.68■■■■□ 3.14
PCSK6-220ENST00000622483 PABPN1Q86U42 306 aaKnown RBP eCLIP34.49■■■■□ 3.11
PCSK6-220ENST00000622483 NACADO15069 1562 aa34.41■■■■□ 3.1
PCSK6-220ENST00000622483 RB1CC1Q8TDY2 1594 aa34.23■■■■□ 3.07
PCSK6-220ENST00000622483 ZEB1P37275 1124 aaPredicted RBP34.2■■■■□ 3.07
PCSK6-220ENST00000622483 EHMT2Q96KQ7 1210 aa34.18■■■■□ 3.06
PCSK6-220ENST00000622483 NEUROD1Q13562 356 aa34.14■■■■□ 3.06
PCSK6-220ENST00000622483 ACIN1Q9UKV3 1341 aaKnown RBP34.02■■■■□ 3.04
PCSK6-220ENST00000622483 CECR2Q9BXF3 1484 aa34.01■■■■□ 3.03
PCSK6-220ENST00000622483 GTF3C3Q9Y5Q9 886 aa34■■■■□ 3.03
PCSK6-220ENST00000622483 FAM9AQ8IZU1 332 aaPredicted RBP33.9■■■■□ 3.02
PCSK6-220ENST00000622483 MYT1Q01538 1121 aa33.79■■■■□ 3
PCSK6-220ENST00000622483 RSF1Q96T23 1441 aaPredicted RBP33.77■■■■□ 3
PCSK6-220ENST00000622483 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.68■■■□□ 2.98
PCSK6-220ENST00000622483 UNC13AQ9UPW8 1703 aa33.6■■■□□ 2.97
PCSK6-220ENST00000622483 MROH2BQ7Z745 1585 aa33.6■■■□□ 2.97
PCSK6-220ENST00000622483 CENPBP07199 599 aaPredicted RBP33.51■■■□□ 2.95
PCSK6-220ENST00000622483 CCER1Q8TC90 406 aaPredicted RBP33.48■■■□□ 2.95
PCSK6-220ENST00000622483 DIEXFQ68CQ4 756 aaKnown RBP33.48■■■□□ 2.95
PCSK6-220ENST00000622483 YTHDC1Q96MU7 727 aaKnown RBP33.44■■■□□ 2.94
PCSK6-220ENST00000622483 BICRAQ9NZM4 1560 aa33.38■■■□□ 2.93
PCSK6-220ENST00000622483 TRIM41Q8WV44 630 aa33.38■■■□□ 2.93
PCSK6-220ENST00000622483 WIZO95785 1651 aa33.32■■■□□ 2.93
PCSK6-220ENST00000622483 TTBK1Q5TCY1 1321 aaPredicted RBP33.32■■■□□ 2.92
PCSK6-220ENST00000622483 BAZ1AQ9NRL2 1556 aaPredicted RBP33.07■■■□□ 2.88
PCSK6-220ENST00000622483 SMARCA4P51532 1647 aa32.96■■■□□ 2.87
PCSK6-220ENST00000622483 MIER1Q8N108 512 aa32.69■■■□□ 2.82
PCSK6-220ENST00000622483 CCDC88BA6NC98 1476 aa32.64■■■□□ 2.82
PCSK6-220ENST00000622483 ZNF316A6NFI3 1004 aaPredicted RBP32.62■■■□□ 2.81
PCSK6-220ENST00000622483 ATAD2BQ9ULI0 1458 aa32.57■■■□□ 2.8
PCSK6-220ENST00000622483 TOP2AP11388 1531 aaKnown RBP32.52■■■□□ 2.8
PCSK6-220ENST00000622483 BAZ1BQ9UIG0 1483 aaKnown RBP32.48■■■□□ 2.79
PCSK6-220ENST00000622483 EIF4G1Q04637 1599 aaKnown RBP32.45■■■□□ 2.79
PCSK6-220ENST00000622483 SMARCA2P51531 1590 aa32.4■■■□□ 2.78
PCSK6-220ENST00000622483 ABCC8Q09428 1581 aa32.35■■■□□ 2.77
PCSK6-220ENST00000622483 DNAJC5BQ9UF47 199 aa32.34■■■□□ 2.77
PCSK6-220ENST00000622483 BCL11AQ9H165 835 aa32.33■■■□□ 2.77
PCSK6-220ENST00000622483 HNRNPUL2Q1KMD3 747 aaKnown RBP32.16■■■□□ 2.74
PCSK6-220ENST00000622483 SUPT16HQ9Y5B9 1047 aaKnown RBP32.15■■■□□ 2.74
PCSK6-220ENST00000622483 ANP32EQ9BTT0 268 aa32.11■■■□□ 2.73
PCSK6-220ENST00000622483 PEG3Q9GZU2 1588 aa32.08■■■□□ 2.73
PCSK6-220ENST00000622483 TSHZ2Q9NRE2 1034 aa32.06■■■□□ 2.72
PCSK6-220ENST00000622483 CSRNP3Q8WYN3 585 aa32.03■■■□□ 2.72
PCSK6-220ENST00000622483 CC2D2AQ9P2K1 1620 aa32.02■■■□□ 2.72
PCSK6-220ENST00000622483 NCAPD3P42695 1498 aa31.99■■■□□ 2.71
PCSK6-220ENST00000622483 BCANQ96GW7 911 aa31.96■■■□□ 2.71
PCSK6-220ENST00000622483 RANGAP1P46060 587 aaPredicted RBP31.88■■■□□ 2.69
PCSK6-220ENST00000622483 SOGA1O94964 1423 aa31.87■■■□□ 2.69
PCSK6-220ENST00000622483 RUSC2Q8N2Y8 1516 aa31.81■■■□□ 2.68
PCSK6-220ENST00000622483 WRNQ14191 1432 aaPredicted RBP eCLIP31.81■■■□□ 2.68
PCSK6-220ENST00000622483 UBTFP17480 764 aaKnown RBP31.8■■■□□ 2.68
PCSK6-220ENST00000622483 CEP162Q5TB80 1403 aa31.75■■■□□ 2.67
PCSK6-220ENST00000622483 HMGXB3Q12766 1538 aa31.7■■■□□ 2.67
PCSK6-220ENST00000622483 NESP48681 1621 aa31.65■■■□□ 2.66
PCSK6-220ENST00000622483 SYNJ1O43426 1573 aa31.6■■■□□ 2.65
PCSK6-220ENST00000622483 KCNH8Q96L42 1107 aa31.6■■■□□ 2.65
PCSK6-220ENST00000622483 CADPSQ9ULU8 1353 aa31.52■■■□□ 2.64
PCSK6-220ENST00000622483 CFTRP13569 1480 aa31.46■■■□□ 2.63
PCSK6-220ENST00000622483 FKBP8Q14318 412 aa31.45■■■□□ 2.62
PCSK6-220ENST00000622483 ITGAEP38570 1179 aa31.41■■■□□ 2.62
PCSK6-220ENST00000622483 CLSPNQ9HAW4 1339 aa31.38■■■□□ 2.61
PCSK6-220ENST00000622483 RBM19Q9Y4C8 960 aaKnown RBP31.32■■■□□ 2.6
PCSK6-220ENST00000622483 TNIKQ9UKE5 1360 aa31.31■■■□□ 2.6
PCSK6-220ENST00000622483 CUX1P39880 1505 aa31.29■■■□□ 2.6
PCSK6-220ENST00000622483 FANCD2Q9BXW9 1451 aa31.23■■■□□ 2.59
PCSK6-220ENST00000622483 APLP2Q06481 763 aa31.2■■■□□ 2.59
PCSK6-220ENST00000622483 MSH5O43196 834 aa31.11■■■□□ 2.57
PCSK6-220ENST00000622483 TOP2BQ02880 1626 aa31.09■■■□□ 2.57
PCSK6-220ENST00000622483 TRIM52Q96A61 297 aa31.06■■■□□ 2.56
PCSK6-220ENST00000622483 RAD54L2Q9Y4B4 1467 aa31.05■■■□□ 2.56
PCSK6-220ENST00000622483 RAPGEF2Q9Y4G8 1499 aa31.04■■■□□ 2.56
PCSK6-220ENST00000622483 PRKCSHP14314 528 aaPredicted RBP31.02■■■□□ 2.56
PCSK6-220ENST00000622483 CUX2O14529 1486 aa31.01■■■□□ 2.55
PCSK6-220ENST00000622483 NEFLP07196 543 aa31■■■□□ 2.55
PCSK6-220ENST00000622483 FGD5Q6ZNL6 1462 aa31■■■□□ 2.55
PCSK6-220ENST00000622483 DHX57Q6P158 1386 aaKnown RBP30.97■■■□□ 2.55
PCSK6-220ENST00000622483 DDX10Q13206 875 aaKnown RBP30.96■■■□□ 2.55
PCSK6-220ENST00000622483 TDRD9Q8NDG6 1382 aaKnown RBP30.92■■■□□ 2.54
PCSK6-220ENST00000622483 ERICH6Q7L0X2 663 aa30.91■■■□□ 2.54
PCSK6-220ENST00000622483 HIRIP3Q9BW71 556 aaPredicted RBP30.91■■■□□ 2.54
PCSK6-220ENST00000622483 CEP164Q9UPV0 1460 aa30.91■■■□□ 2.54
PCSK6-220ENST00000622483 EEA1Q15075 1411 aa30.9■■■□□ 2.54
PCSK6-220ENST00000622483 GOLGA3Q08378 1498 aa30.89■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms