RNA–Protein interactions for RNA: ENST00000424542.6

SLC9A3R2-201, Transcript of SLC9A3 regulator 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC9A3R2, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3R2-201ENST00000424542 NISCHQ9Y2I1 1504 aa52.84■■■■■ 6.05
SLC9A3R2-201ENST00000424542 CCDC180Q9P1Z9 1646 aa45.34■■■■■ 4.85
SLC9A3R2-201ENST00000424542 ZCCHC6Q5VYS8 1495 aaKnown RBP44.65■■■■■ 4.74
SLC9A3R2-201ENST00000424542 SHROOM4Q9ULL8 1493 aa44.23■■■■■ 4.67
SLC9A3R2-201ENST00000424542 DCAF1Q9Y4B6 1507 aa43.59■■■■■ 4.57
SLC9A3R2-201ENST00000424542 DCAF8L2P0C7V8 631 aa43.43■■■■■ 4.54
SLC9A3R2-201ENST00000424542 SUPT5HO00267 1087 aaKnown RBP43.17■■■■■ 4.5
SLC9A3R2-201ENST00000424542 MYO15BQ96JP2 1530 aa42.56■■■■■ 4.4
SLC9A3R2-201ENST00000424542 SCRIBQ14160 1630 aa42.08■■■■■ 4.33
SLC9A3R2-201ENST00000424542 ABCC9O60706 1549 aa42.03■■■■■ 4.32
SLC9A3R2-201ENST00000424542 NACADO15069 1562 aa41.97■■■■■ 4.31
SLC9A3R2-201ENST00000424542 CHIC1Q5VXU3 224 aa41.93■■■■■ 4.3
SLC9A3R2-201ENST00000424542 RSF1Q96T23 1441 aaPredicted RBP41.55■■■■■ 4.24
SLC9A3R2-201ENST00000424542 RB1CC1Q8TDY2 1594 aa41.33■■■■■ 4.21
SLC9A3R2-201ENST00000424542 CECR2Q9BXF3 1484 aa41.07■■■■■ 4.17
SLC9A3R2-201ENST00000424542 MROH2BQ7Z745 1585 aa40.95■■■■■ 4.15
SLC9A3R2-201ENST00000424542 WIZO95785 1651 aa40.67■■■■■ 4.1
SLC9A3R2-201ENST00000424542 BAZ1AQ9NRL2 1556 aaPredicted RBP40.66■■■■■ 4.1
SLC9A3R2-201ENST00000424542 UNC13AQ9UPW8 1703 aa40.6■■■■■ 4.09
SLC9A3R2-201ENST00000424542 LOC105371045A0A1W2PR82 267 aa40.47■■■■■ 4.07
SLC9A3R2-201ENST00000424542 TRIM41Q8WV44 630 aa40.41■■■■■ 4.06
SLC9A3R2-201ENST00000424542 SMARCA4P51532 1647 aa40.34■■■■■ 4.05
SLC9A3R2-201ENST00000424542 TOP2AP11388 1531 aaKnown RBP40.2■■■■■ 4.03
SLC9A3R2-201ENST00000424542 BICRAQ9NZM4 1560 aa40.16■■■■■ 4.02
SLC9A3R2-201ENST00000424542 EIF4G1Q04637 1599 aaKnown RBP40.09■■■■■ 4.01
SLC9A3R2-201ENST00000424542 PCGF6Q9BYE7 350 aa39.96■■■■□ 3.99
SLC9A3R2-201ENST00000424542 PABPN1Q86U42 306 aaKnown RBP eCLIP39.93■■■■□ 3.984e-9■■■■□ 19.4
SLC9A3R2-201ENST00000424542 SMARCA2P51531 1590 aa39.9■■■■□ 3.98
SLC9A3R2-201ENST00000424542 CCDC88BA6NC98 1476 aa39.89■■■■□ 3.98
SLC9A3R2-201ENST00000424542 FAM9AQ8IZU1 332 aaPredicted RBP39.82■■■■□ 3.97
SLC9A3R2-201ENST00000424542 HRCP23327 699 aa39.79■■■■□ 3.96
SLC9A3R2-201ENST00000424542 PEG3Q9GZU2 1588 aa39.74■■■■□ 3.95
SLC9A3R2-201ENST00000424542 TRIM26Q12899 539 aaPredicted RBP39.53■■■■□ 3.92
SLC9A3R2-201ENST00000424542 ABCC8Q09428 1581 aa39.52■■■■□ 3.92
SLC9A3R2-201ENST00000424542 ATAD2BQ9ULI0 1458 aa39.4■■■■□ 3.9
SLC9A3R2-201ENST00000424542 EHMT2Q96KQ7 1210 aa39.3■■■■□ 3.88
SLC9A3R2-201ENST00000424542 BAZ1BQ9UIG0 1483 aaKnown RBP39.24■■■■□ 3.87
SLC9A3R2-201ENST00000424542 EEA1Q15075 1411 aa39.07■■■■□ 3.85
SLC9A3R2-201ENST00000424542 SOGA1O94964 1423 aa39.06■■■■□ 3.84
SLC9A3R2-201ENST00000424542 WRNQ14191 1432 aaPredicted RBP eCLIP39.04■■■■□ 3.84
SLC9A3R2-201ENST00000424542 SYNJ1O43426 1573 aa38.86■■■■□ 3.81
SLC9A3R2-201ENST00000424542 RUSC2Q8N2Y8 1516 aa38.85■■■■□ 3.81
SLC9A3R2-201ENST00000424542 CSRNP3Q8WYN3 585 aa38.85■■■■□ 3.81
SLC9A3R2-201ENST00000424542 HMGXB3Q12766 1538 aa38.81■■■■□ 3.8
SLC9A3R2-201ENST00000424542 NCAPD3P42695 1498 aa38.8■■■■□ 3.8
SLC9A3R2-201ENST00000424542 TNIKQ9UKE5 1360 aa38.79■■■■□ 3.8
SLC9A3R2-201ENST00000424542 PPARGC1BQ86YN6 1023 aaKnown RBP38.78■■■■□ 3.8
SLC9A3R2-201ENST00000424542 CEP162Q5TB80 1403 aa38.72■■■■□ 3.79
SLC9A3R2-201ENST00000424542 GOLGA3Q08378 1498 aa38.65■■■■□ 3.78
SLC9A3R2-201ENST00000424542 ZEB1P37275 1124 aaPredicted RBP38.54■■■■□ 3.76
SLC9A3R2-201ENST00000424542 TOP2BQ02880 1626 aa38.53■■■■□ 3.76
SLC9A3R2-201ENST00000424542 KIF21BO75037 1637 aa38.52■■■■□ 3.76
SLC9A3R2-201ENST00000424542 CEP164Q9UPV0 1460 aa38.51■■■■□ 3.76
SLC9A3R2-201ENST00000424542 UBTFP17480 764 aaKnown RBP38.51■■■■□ 3.76
SLC9A3R2-201ENST00000424542 BIVM-ERCC5R4GMW8 1640 aa38.44■■■■□ 3.74
SLC9A3R2-201ENST00000424542 CFTRP13569 1480 aa38.32■■■■□ 3.72
SLC9A3R2-201ENST00000424542 CUX1P39880 1505 aa38.18■■■■□ 3.7
SLC9A3R2-201ENST00000424542 RAPGEF2Q9Y4G8 1499 aa38.18■■■■□ 3.7
SLC9A3R2-201ENST00000424542 CLIP1P30622 1438 aa38.12■■■■□ 3.69
SLC9A3R2-201ENST00000424542 PRDM2Q13029 1718 aa38.06■■■■□ 3.68
SLC9A3R2-201ENST00000424542 ERICH3Q5RHP9 1530 aa38.02■■■■□ 3.68
SLC9A3R2-201ENST00000424542 PRXQ9BXM0 1461 aa38■■■■□ 3.67
SLC9A3R2-201ENST00000424542 CC2D2AQ9P2K1 1620 aa37.95■■■■□ 3.67
SLC9A3R2-201ENST00000424542 VPS8Q8N3P4 1428 aa37.95■■■■□ 3.67
SLC9A3R2-201ENST00000424542 TTBK1Q5TCY1 1321 aaPredicted RBP37.95■■■■□ 3.67
SLC9A3R2-201ENST00000424542 CADPSQ9ULU8 1353 aa37.94■■■■□ 3.66
SLC9A3R2-201ENST00000424542 KIF27Q86VH2 1401 aa37.92■■■■□ 3.66
SLC9A3R2-201ENST00000424542 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.85■■■■□ 3.65
SLC9A3R2-201ENST00000424542 CCER1Q8TC90 406 aaPredicted RBP37.79■■■■□ 3.64
SLC9A3R2-201ENST00000424542 RANGAP1P46060 587 aaPredicted RBP37.62■■■■□ 3.61
SLC9A3R2-201ENST00000424542 APLP2Q06481 763 aa37.61■■■■□ 3.61
SLC9A3R2-201ENST00000424542 ARAP1Q96P48 1450 aa37.59■■■■□ 3.61
SLC9A3R2-201ENST00000424542 CUX2O14529 1486 aa37.57■■■■□ 3.61
SLC9A3R2-201ENST00000424542 FGD5Q6ZNL6 1462 aa37.56■■■■□ 3.6
SLC9A3R2-201ENST00000424542 FANCD2Q9BXW9 1451 aa37.54■■■■□ 3.6
SLC9A3R2-201ENST00000424542 IGF1RP08069 1367 aa37.5■■■■□ 3.59
SLC9A3R2-201ENST00000424542 DNMBPQ6XZF7 1577 aa37.37■■■■□ 3.57
SLC9A3R2-201ENST00000424542 ARHGAP35Q9NRY4 1499 aa37.36■■■■□ 3.57
SLC9A3R2-201ENST00000424542 CARMIL1Q5VZK9 1371 aa37.32■■■■□ 3.57
SLC9A3R2-201ENST00000424542 NESP48681 1621 aa37.29■■■■□ 3.56
SLC9A3R2-201ENST00000424542 HNRNPUL2Q1KMD3 747 aaKnown RBP37.28■■■■□ 3.56
SLC9A3R2-201ENST00000424542 TOPBP1Q92547 1522 aa37.26■■■■□ 3.56
SLC9A3R2-201ENST00000424542 LAMC3Q9Y6N6 1575 aa37.23■■■■□ 3.55
SLC9A3R2-201ENST00000424542 ABCA10Q8WWZ4 1543 aa37.22■■■■□ 3.55
SLC9A3R2-201ENST00000424542 POLA1P09884 1462 aaPredicted RBP37.2■■■■□ 3.55
SLC9A3R2-201ENST00000424542 KANK4Q5T7N3 995 aaPredicted RBP37.16■■■■□ 3.54
SLC9A3R2-201ENST00000424542 RAD54L2Q9Y4B4 1467 aa37.15■■■■□ 3.54
SLC9A3R2-201ENST00000424542 RRBP1Q9P2E9 1410 aaKnown RBP37.03■■■■□ 3.52
SLC9A3R2-201ENST00000424542 URB2Q14146 1524 aaKnown RBP37.02■■■■□ 3.52
SLC9A3R2-201ENST00000424542 MAP3K1Q13233 1512 aa36.99■■■■□ 3.51
SLC9A3R2-201ENST00000424542 CUL7Q14999 1698 aa36.98■■■■□ 3.51
SLC9A3R2-201ENST00000424542 WDR97A6NE52 1622 aa36.94■■■■□ 3.5
SLC9A3R2-201ENST00000424542 PDS5BQ9NTI5 1447 aa36.94■■■■□ 3.5
SLC9A3R2-201ENST00000424542 TIAM1Q13009 1591 aa36.91■■■■□ 3.5
SLC9A3R2-201ENST00000424542 FHAD1B1AJZ9 1412 aa36.87■■■■□ 3.49
SLC9A3R2-201ENST00000424542 CCNB3Q8WWL7 1395 aa36.83■■■■□ 3.49
SLC9A3R2-201ENST00000424542 DNAJC5BQ9UF47 199 aa36.82■■■■□ 3.48
SLC9A3R2-201ENST00000424542 EFCAB5A4FU69 1503 aa36.8■■■■□ 3.48
SLC9A3R2-201ENST00000424542 ABCA5Q8WWZ7 1642 aa36.8■■■■□ 3.48
SLC9A3R2-201ENST00000424542 DIEXFQ68CQ4 756 aaKnown RBP36.79■■■■□ 3.48
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms