Protein–RNA interactions for Protein: J3KQ70

INO80B-WBP1, HCG2039827, isoform CRA_e, humanhuman

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
INO80B-WBP1J3KQ70 CHST11-202ENST00000546689 756 ntTSL 2 BASIC28.29■■■□□ 2.12
INO80B-WBP1J3KQ70 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC28.28■■■□□ 2.12
INO80B-WBP1J3KQ70 ABCB10P1-201ENST00000614297 2181 ntBASIC28.28■■■□□ 2.12
INO80B-WBP1J3KQ70 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
INO80B-WBP1J3KQ70 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC28.27■■■□□ 2.12
INO80B-WBP1J3KQ70 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
INO80B-WBP1J3KQ70 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
INO80B-WBP1J3KQ70 METRNL-202ENST00000570778 967 ntTSL 5 BASIC28.26■■■□□ 2.11
INO80B-WBP1J3KQ70 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC28.24■■■□□ 2.11
INO80B-WBP1J3KQ70 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
INO80B-WBP1J3KQ70 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC28.23■■■□□ 2.11
INO80B-WBP1J3KQ70 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC28.23■■■□□ 2.11
INO80B-WBP1J3KQ70 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC28.23■■■□□ 2.11
INO80B-WBP1J3KQ70 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
INO80B-WBP1J3KQ70 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC28.22■■■□□ 2.11
INO80B-WBP1J3KQ70 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC28.22■■■□□ 2.11
INO80B-WBP1J3KQ70 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
INO80B-WBP1J3KQ70 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
INO80B-WBP1J3KQ70 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
INO80B-WBP1J3KQ70 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
INO80B-WBP1J3KQ70 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
INO80B-WBP1J3KQ70 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC28.2■■■□□ 2.11
INO80B-WBP1J3KQ70 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC28.2■■■□□ 2.11
INO80B-WBP1J3KQ70 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC28.2■■■□□ 2.1
INO80B-WBP1J3KQ70 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC28.2■■■□□ 2.1
INO80B-WBP1J3KQ70 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.1
INO80B-WBP1J3KQ70 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
INO80B-WBP1J3KQ70 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
INO80B-WBP1J3KQ70 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
INO80B-WBP1J3KQ70 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC28.18■■■□□ 2.1
INO80B-WBP1J3KQ70 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC28.18■■■□□ 2.1
INO80B-WBP1J3KQ70 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC28.18■■■□□ 2.1
INO80B-WBP1J3KQ70 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
INO80B-WBP1J3KQ70 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
INO80B-WBP1J3KQ70 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
INO80B-WBP1J3KQ70 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC28.17■■■□□ 2.1
INO80B-WBP1J3KQ70 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
INO80B-WBP1J3KQ70 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC28.17■■■□□ 2.1
INO80B-WBP1J3KQ70 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC28.17■■■□□ 2.1
INO80B-WBP1J3KQ70 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC28.16■■■□□ 2.1
INO80B-WBP1J3KQ70 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
INO80B-WBP1J3KQ70 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
INO80B-WBP1J3KQ70 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
INO80B-WBP1J3KQ70 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.1
INO80B-WBP1J3KQ70 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC28.14■■■□□ 2.1
INO80B-WBP1J3KQ70 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC28.14■■■□□ 2.1
INO80B-WBP1J3KQ70 MEST-211ENST00000437945 1455 ntTSL 5 BASIC28.14■■■□□ 2.09
INO80B-WBP1J3KQ70 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
INO80B-WBP1J3KQ70 AC110285.7-201ENST00000624417 1536 ntBASIC28.13■■■□□ 2.09
INO80B-WBP1J3KQ70 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
INO80B-WBP1J3KQ70 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC28.13■■■□□ 2.09
INO80B-WBP1J3KQ70 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC28.13■■■□□ 2.09
INO80B-WBP1J3KQ70 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
INO80B-WBP1J3KQ70 AP004833.2-201ENST00000532228 1454 ntBASIC28.12■■■□□ 2.09
INO80B-WBP1J3KQ70 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
INO80B-WBP1J3KQ70 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC28.1■■■□□ 2.09
INO80B-WBP1J3KQ70 AL139393.2-201ENST00000608721 2025 ntBASIC28.1■■■□□ 2.09
INO80B-WBP1J3KQ70 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC28.1■■■□□ 2.09
INO80B-WBP1J3KQ70 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
INO80B-WBP1J3KQ70 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC28.1■■■□□ 2.09
INO80B-WBP1J3KQ70 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC28.1■■■□□ 2.09
INO80B-WBP1J3KQ70 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
INO80B-WBP1J3KQ70 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC28.09■■■□□ 2.09
INO80B-WBP1J3KQ70 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
INO80B-WBP1J3KQ70 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
INO80B-WBP1J3KQ70 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC28.08■■■□□ 2.09
INO80B-WBP1J3KQ70 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC28.08■■■□□ 2.09
INO80B-WBP1J3KQ70 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
INO80B-WBP1J3KQ70 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC28.08■■■□□ 2.09
INO80B-WBP1J3KQ70 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
INO80B-WBP1J3KQ70 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
INO80B-WBP1J3KQ70 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
INO80B-WBP1J3KQ70 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
INO80B-WBP1J3KQ70 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
INO80B-WBP1J3KQ70 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC28.05■■■□□ 2.08
INO80B-WBP1J3KQ70 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
INO80B-WBP1J3KQ70 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC28.05■■■□□ 2.08
INO80B-WBP1J3KQ70 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC28.05■■■□□ 2.08
INO80B-WBP1J3KQ70 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC28.05■■■□□ 2.08
INO80B-WBP1J3KQ70 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
INO80B-WBP1J3KQ70 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
INO80B-WBP1J3KQ70 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
INO80B-WBP1J3KQ70 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC28.04■■■□□ 2.08
INO80B-WBP1J3KQ70 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC28.04■■■□□ 2.08
INO80B-WBP1J3KQ70 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC28.03■■■□□ 2.08
INO80B-WBP1J3KQ70 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC28.03■■■□□ 2.08
INO80B-WBP1J3KQ70 AC100797.4-201ENST00000631653 1827 ntBASIC28.03■■■□□ 2.08
INO80B-WBP1J3KQ70 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
INO80B-WBP1J3KQ70 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC28.02■■■□□ 2.08
INO80B-WBP1J3KQ70 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC28.02■■■□□ 2.08
INO80B-WBP1J3KQ70 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
INO80B-WBP1J3KQ70 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC28.01■■■□□ 2.07
INO80B-WBP1J3KQ70 AC008813.1-201ENST00000536597 885 ntBASIC28.01■■■□□ 2.07
INO80B-WBP1J3KQ70 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC28.01■■■□□ 2.07
INO80B-WBP1J3KQ70 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC28.01■■■□□ 2.07
INO80B-WBP1J3KQ70 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC28■■■□□ 2.07
INO80B-WBP1J3KQ70 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC28■■■□□ 2.07
INO80B-WBP1J3KQ70 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC28■■■□□ 2.07
INO80B-WBP1J3KQ70 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC28■■■□□ 2.07
INO80B-WBP1J3KQ70 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC28■■■□□ 2.07
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms