Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
CCDC196A0A1B0GTZ2 AL139393.2-201ENST00000608721 2025 ntBASIC30.26■■■□□ 2.43
CCDC196A0A1B0GTZ2 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC30.26■■■□□ 2.43
CCDC196A0A1B0GTZ2 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
CCDC196A0A1B0GTZ2 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC30.26■■■□□ 2.43
CCDC196A0A1B0GTZ2 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
CCDC196A0A1B0GTZ2 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
CCDC196A0A1B0GTZ2 BOD1-206ENST00000480951 814 ntTSL 2 BASIC30.25■■■□□ 2.43
CCDC196A0A1B0GTZ2 CIB2-204ENST00000557846 934 ntTSL 3 BASIC30.24■■■□□ 2.43
CCDC196A0A1B0GTZ2 EI24-212ENST00000615917 1407 ntTSL 2 BASIC30.23■■■□□ 2.43
CCDC196A0A1B0GTZ2 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC30.23■■■□□ 2.43
CCDC196A0A1B0GTZ2 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
CCDC196A0A1B0GTZ2 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC30.21■■■□□ 2.43
CCDC196A0A1B0GTZ2 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC30.21■■■□□ 2.43
CCDC196A0A1B0GTZ2 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC30.2■■■□□ 2.43
CCDC196A0A1B0GTZ2 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC30.2■■■□□ 2.43
CCDC196A0A1B0GTZ2 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC30.19■■■□□ 2.42
CCDC196A0A1B0GTZ2 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC30.19■■■□□ 2.42
CCDC196A0A1B0GTZ2 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC30.19■■■□□ 2.42
CCDC196A0A1B0GTZ2 AP004833.2-201ENST00000532228 1454 ntBASIC30.19■■■□□ 2.42
CCDC196A0A1B0GTZ2 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC30.18■■■□□ 2.42
CCDC196A0A1B0GTZ2 AC139426.1-201ENST00000568218 2529 ntBASIC30.18■■■□□ 2.42
CCDC196A0A1B0GTZ2 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC30.18■■■□□ 2.42
CCDC196A0A1B0GTZ2 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
CCDC196A0A1B0GTZ2 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
CCDC196A0A1B0GTZ2 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC30.17■■■□□ 2.42
CCDC196A0A1B0GTZ2 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
CCDC196A0A1B0GTZ2 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
CCDC196A0A1B0GTZ2 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
CCDC196A0A1B0GTZ2 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC30.15■■■□□ 2.42
CCDC196A0A1B0GTZ2 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
CCDC196A0A1B0GTZ2 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
CCDC196A0A1B0GTZ2 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC30.14■■■□□ 2.42
CCDC196A0A1B0GTZ2 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC30.14■■■□□ 2.42
CCDC196A0A1B0GTZ2 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC30.14■■■□□ 2.42
CCDC196A0A1B0GTZ2 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC30.13■■■□□ 2.41
CCDC196A0A1B0GTZ2 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC30.12■■■□□ 2.41
CCDC196A0A1B0GTZ2 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CCDC196A0A1B0GTZ2 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CCDC196A0A1B0GTZ2 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
CCDC196A0A1B0GTZ2 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CCDC196A0A1B0GTZ2 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC30.11■■■□□ 2.41
CCDC196A0A1B0GTZ2 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC30.11■■■□□ 2.41
CCDC196A0A1B0GTZ2 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
CCDC196A0A1B0GTZ2 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC30.11■■■□□ 2.41
CCDC196A0A1B0GTZ2 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC30.1■■■□□ 2.41
CCDC196A0A1B0GTZ2 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
CCDC196A0A1B0GTZ2 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC30.09■■■□□ 2.41
CCDC196A0A1B0GTZ2 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC30.08■■■□□ 2.41
CCDC196A0A1B0GTZ2 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.41
CCDC196A0A1B0GTZ2 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC30.07■■■□□ 2.4
CCDC196A0A1B0GTZ2 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
CCDC196A0A1B0GTZ2 DUX4L29-201ENST00000425409 679 ntBASIC30.07■■■□□ 2.4
CCDC196A0A1B0GTZ2 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
CCDC196A0A1B0GTZ2 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC30.06■■■□□ 2.4
CCDC196A0A1B0GTZ2 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CCDC196A0A1B0GTZ2 LINC00273-201ENST00000539813 1452 ntBASIC30.06■■■□□ 2.4
CCDC196A0A1B0GTZ2 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CCDC196A0A1B0GTZ2 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
CCDC196A0A1B0GTZ2 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
CCDC196A0A1B0GTZ2 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CCDC196A0A1B0GTZ2 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC30.04■■■□□ 2.4
CCDC196A0A1B0GTZ2 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
CCDC196A0A1B0GTZ2 AC021231.2-201ENST00000594613 730 ntBASIC30.03■■■□□ 2.4
CCDC196A0A1B0GTZ2 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
CCDC196A0A1B0GTZ2 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC30.01■■■□□ 2.39
CCDC196A0A1B0GTZ2 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
CCDC196A0A1B0GTZ2 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
CCDC196A0A1B0GTZ2 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC30.01■■■□□ 2.39
CCDC196A0A1B0GTZ2 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
CCDC196A0A1B0GTZ2 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC30■■■□□ 2.39
CCDC196A0A1B0GTZ2 CALM3-209ENST00000597743 577 ntTSL 4 BASIC30■■■□□ 2.39
CCDC196A0A1B0GTZ2 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC30■■■□□ 2.39
CCDC196A0A1B0GTZ2 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC30■■■□□ 2.39
CCDC196A0A1B0GTZ2 AC135983.2-203ENST00000454486 1613 ntBASIC30■■■□□ 2.39
CCDC196A0A1B0GTZ2 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC29.99■■■□□ 2.39
CCDC196A0A1B0GTZ2 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
CCDC196A0A1B0GTZ2 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC29.98■■■□□ 2.39
CCDC196A0A1B0GTZ2 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
CCDC196A0A1B0GTZ2 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
CCDC196A0A1B0GTZ2 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC29.96■■■□□ 2.39
CCDC196A0A1B0GTZ2 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
CCDC196A0A1B0GTZ2 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC29.96■■■□□ 2.39
CCDC196A0A1B0GTZ2 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC29.96■■■□□ 2.39
CCDC196A0A1B0GTZ2 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC29.96■■■□□ 2.39
CCDC196A0A1B0GTZ2 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
CCDC196A0A1B0GTZ2 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC29.95■■■□□ 2.39
CCDC196A0A1B0GTZ2 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC29.95■■■□□ 2.39
CCDC196A0A1B0GTZ2 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC29.95■■■□□ 2.39
CCDC196A0A1B0GTZ2 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC29.95■■■□□ 2.39
CCDC196A0A1B0GTZ2 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
CCDC196A0A1B0GTZ2 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC29.95■■■□□ 2.39
CCDC196A0A1B0GTZ2 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC29.95■■■□□ 2.39
CCDC196A0A1B0GTZ2 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC29.95■■■□□ 2.38
CCDC196A0A1B0GTZ2 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC29.95■■■□□ 2.38
CCDC196A0A1B0GTZ2 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
CCDC196A0A1B0GTZ2 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC29.94■■■□□ 2.38
CCDC196A0A1B0GTZ2 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
CCDC196A0A1B0GTZ2 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
CCDC196A0A1B0GTZ2 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms