Protein–RNA interactions for Protein: A0A1B0GTE1

LOC100289279, Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC100289279A0A1B0GTE1 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
LOC100289279A0A1B0GTE1 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC22.78■■□□□ 1.24
LOC100289279A0A1B0GTE1 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
LOC100289279A0A1B0GTE1 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC22.77■■□□□ 1.24
LOC100289279A0A1B0GTE1 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
LOC100289279A0A1B0GTE1 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC22.77■■□□□ 1.24
LOC100289279A0A1B0GTE1 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.23
LOC100289279A0A1B0GTE1 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
LOC100289279A0A1B0GTE1 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC22.76■■□□□ 1.23
LOC100289279A0A1B0GTE1 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC22.76■■□□□ 1.23
LOC100289279A0A1B0GTE1 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
LOC100289279A0A1B0GTE1 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
LOC100289279A0A1B0GTE1 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC22.75■■□□□ 1.23
LOC100289279A0A1B0GTE1 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
LOC100289279A0A1B0GTE1 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
LOC100289279A0A1B0GTE1 PVT1-219ENST00000523427 938 ntTSL 3 BASIC22.74■■□□□ 1.23
LOC100289279A0A1B0GTE1 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
LOC100289279A0A1B0GTE1 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
LOC100289279A0A1B0GTE1 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC22.73■■□□□ 1.23
LOC100289279A0A1B0GTE1 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC22.73■■□□□ 1.23
LOC100289279A0A1B0GTE1 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC22.72■■□□□ 1.23
LOC100289279A0A1B0GTE1 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
LOC100289279A0A1B0GTE1 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
LOC100289279A0A1B0GTE1 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
LOC100289279A0A1B0GTE1 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
LOC100289279A0A1B0GTE1 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
LOC100289279A0A1B0GTE1 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC22.7■■□□□ 1.22
LOC100289279A0A1B0GTE1 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC22.7■■□□□ 1.22
LOC100289279A0A1B0GTE1 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
LOC100289279A0A1B0GTE1 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
LOC100289279A0A1B0GTE1 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
LOC100289279A0A1B0GTE1 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
LOC100289279A0A1B0GTE1 DENR-202ENST00000455982 1052 ntTSL 5 BASIC22.68■■□□□ 1.22
LOC100289279A0A1B0GTE1 AL139393.2-201ENST00000608721 2025 ntBASIC22.68■■□□□ 1.22
LOC100289279A0A1B0GTE1 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
LOC100289279A0A1B0GTE1 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC22.67■■□□□ 1.22
LOC100289279A0A1B0GTE1 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
LOC100289279A0A1B0GTE1 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
LOC100289279A0A1B0GTE1 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
LOC100289279A0A1B0GTE1 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC22.65■■□□□ 1.22
LOC100289279A0A1B0GTE1 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
LOC100289279A0A1B0GTE1 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC22.64■■□□□ 1.22
LOC100289279A0A1B0GTE1 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
LOC100289279A0A1B0GTE1 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
LOC100289279A0A1B0GTE1 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC22.63■■□□□ 1.21
LOC100289279A0A1B0GTE1 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
LOC100289279A0A1B0GTE1 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC22.63■■□□□ 1.21
LOC100289279A0A1B0GTE1 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
LOC100289279A0A1B0GTE1 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
LOC100289279A0A1B0GTE1 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
LOC100289279A0A1B0GTE1 HLA-V-202ENST00000446817 847 ntBASIC22.62■■□□□ 1.21
LOC100289279A0A1B0GTE1 BOD1-206ENST00000480951 814 ntTSL 2 BASIC22.62■■□□□ 1.21
LOC100289279A0A1B0GTE1 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
LOC100289279A0A1B0GTE1 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC22.62■■□□□ 1.21
LOC100289279A0A1B0GTE1 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
LOC100289279A0A1B0GTE1 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
LOC100289279A0A1B0GTE1 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
LOC100289279A0A1B0GTE1 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
LOC100289279A0A1B0GTE1 DRD5P2-201ENST00000421395 2012 ntBASIC22.61■■□□□ 1.21
LOC100289279A0A1B0GTE1 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
LOC100289279A0A1B0GTE1 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC22.6■■□□□ 1.21
LOC100289279A0A1B0GTE1 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC22.6■■□□□ 1.21
LOC100289279A0A1B0GTE1 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
LOC100289279A0A1B0GTE1 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
LOC100289279A0A1B0GTE1 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
LOC100289279A0A1B0GTE1 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
LOC100289279A0A1B0GTE1 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC22.59■■□□□ 1.21
LOC100289279A0A1B0GTE1 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC22.58■■□□□ 1.21
LOC100289279A0A1B0GTE1 MBP-237ENST00000579129 1052 ntTSL 5 BASIC22.58■■□□□ 1.21
LOC100289279A0A1B0GTE1 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
LOC100289279A0A1B0GTE1 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
LOC100289279A0A1B0GTE1 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
LOC100289279A0A1B0GTE1 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC22.56■■□□□ 1.2
LOC100289279A0A1B0GTE1 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
LOC100289279A0A1B0GTE1 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
LOC100289279A0A1B0GTE1 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
LOC100289279A0A1B0GTE1 ZNRF2P2-203ENST00000454624 420 ntBASIC22.54■■□□□ 1.2
LOC100289279A0A1B0GTE1 RPS2-209ENST00000529806 993 ntTSL 3 BASIC22.54■■□□□ 1.2
LOC100289279A0A1B0GTE1 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC22.54■■□□□ 1.2
LOC100289279A0A1B0GTE1 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
LOC100289279A0A1B0GTE1 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
LOC100289279A0A1B0GTE1 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC22.53■■□□□ 1.2
LOC100289279A0A1B0GTE1 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
LOC100289279A0A1B0GTE1 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
LOC100289279A0A1B0GTE1 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
LOC100289279A0A1B0GTE1 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
LOC100289279A0A1B0GTE1 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC22.52■■□□□ 1.2
LOC100289279A0A1B0GTE1 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC22.52■■□□□ 1.19
LOC100289279A0A1B0GTE1 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
LOC100289279A0A1B0GTE1 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
LOC100289279A0A1B0GTE1 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
LOC100289279A0A1B0GTE1 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
LOC100289279A0A1B0GTE1 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
LOC100289279A0A1B0GTE1 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
LOC100289279A0A1B0GTE1 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
LOC100289279A0A1B0GTE1 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
LOC100289279A0A1B0GTE1 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
LOC100289279A0A1B0GTE1 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
LOC100289279A0A1B0GTE1 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
LOC100289279A0A1B0GTE1 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms