Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRGV1A0A0A0MS02 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC18.94■□□□□ 0.62
TRGV1A0A0A0MS02 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC18.94■□□□□ 0.62
TRGV1A0A0A0MS02 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC18.94■□□□□ 0.62
TRGV1A0A0A0MS02 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRGV1A0A0A0MS02 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRGV1A0A0A0MS02 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRGV1A0A0A0MS02 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRGV1A0A0A0MS02 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRGV1A0A0A0MS02 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRGV1A0A0A0MS02 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC18.93■□□□□ 0.62
TRGV1A0A0A0MS02 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRGV1A0A0A0MS02 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
TRGV1A0A0A0MS02 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRGV1A0A0A0MS02 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC18.91■□□□□ 0.62
TRGV1A0A0A0MS02 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRGV1A0A0A0MS02 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRGV1A0A0A0MS02 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
TRGV1A0A0A0MS02 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
TRGV1A0A0A0MS02 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC18.89■□□□□ 0.61
TRGV1A0A0A0MS02 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRGV1A0A0A0MS02 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRGV1A0A0A0MS02 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRGV1A0A0A0MS02 AC010864.1-201ENST00000609407 1511 ntBASIC18.88■□□□□ 0.61
TRGV1A0A0A0MS02 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
TRGV1A0A0A0MS02 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRGV1A0A0A0MS02 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRGV1A0A0A0MS02 AC139426.1-201ENST00000568218 2529 ntBASIC18.88■□□□□ 0.61
TRGV1A0A0A0MS02 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRGV1A0A0A0MS02 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
TRGV1A0A0A0MS02 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC18.85■□□□□ 0.61
TRGV1A0A0A0MS02 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC18.85■□□□□ 0.61
TRGV1A0A0A0MS02 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRGV1A0A0A0MS02 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
TRGV1A0A0A0MS02 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
TRGV1A0A0A0MS02 MIR762-201ENST00000390236 83 ntBASIC18.84■□□□□ 0.61
TRGV1A0A0A0MS02 SUZ12P1-203ENST00000578195 985 ntBASIC18.84■□□□□ 0.61
TRGV1A0A0A0MS02 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRGV1A0A0A0MS02 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
TRGV1A0A0A0MS02 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TRGV1A0A0A0MS02 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC18.83■□□□□ 0.6
TRGV1A0A0A0MS02 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC18.83■□□□□ 0.6
TRGV1A0A0A0MS02 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRGV1A0A0A0MS02 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC18.82■□□□□ 0.6
TRGV1A0A0A0MS02 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TRGV1A0A0A0MS02 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRGV1A0A0A0MS02 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRGV1A0A0A0MS02 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRGV1A0A0A0MS02 CHML-205ENST00000638160 705 ntTSL 3 BASIC18.81■□□□□ 0.6
TRGV1A0A0A0MS02 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRGV1A0A0A0MS02 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRGV1A0A0A0MS02 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRGV1A0A0A0MS02 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRGV1A0A0A0MS02 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TRGV1A0A0A0MS02 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TRGV1A0A0A0MS02 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRGV1A0A0A0MS02 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRGV1A0A0A0MS02 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRGV1A0A0A0MS02 RPS2-209ENST00000529806 993 ntTSL 3 BASIC18.79■□□□□ 0.6
TRGV1A0A0A0MS02 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRGV1A0A0A0MS02 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TRGV1A0A0A0MS02 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRGV1A0A0A0MS02 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRGV1A0A0A0MS02 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC18.78■□□□□ 0.6
TRGV1A0A0A0MS02 HNRNPLP2-201ENST00000568980 1570 ntBASIC18.78■□□□□ 0.6
TRGV1A0A0A0MS02 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
TRGV1A0A0A0MS02 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC18.77■□□□□ 0.6
TRGV1A0A0A0MS02 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRGV1A0A0A0MS02 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRGV1A0A0A0MS02 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRGV1A0A0A0MS02 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRGV1A0A0A0MS02 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRGV1A0A0A0MS02 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC18.77■□□□□ 0.6
TRGV1A0A0A0MS02 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
TRGV1A0A0A0MS02 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRGV1A0A0A0MS02 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRGV1A0A0A0MS02 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRGV1A0A0A0MS02 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRGV1A0A0A0MS02 AC005559.1-201ENST00000589661 871 ntBASIC18.76■□□□□ 0.59
TRGV1A0A0A0MS02 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRGV1A0A0A0MS02 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRGV1A0A0A0MS02 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRGV1A0A0A0MS02 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRGV1A0A0A0MS02 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC18.74■□□□□ 0.59
TRGV1A0A0A0MS02 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRGV1A0A0A0MS02 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRGV1A0A0A0MS02 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRGV1A0A0A0MS02 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRGV1A0A0A0MS02 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
TRGV1A0A0A0MS02 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRGV1A0A0A0MS02 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRGV1A0A0A0MS02 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
TRGV1A0A0A0MS02 SHF-206ENST00000560471 2499 ntTSL 5 BASIC18.72■□□□□ 0.59
TRGV1A0A0A0MS02 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRGV1A0A0A0MS02 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRGV1A0A0A0MS02 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
TRGV1A0A0A0MS02 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
TRGV1A0A0A0MS02 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRGV1A0A0A0MS02 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRGV1A0A0A0MS02 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms