Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
TRGV1A0A0A0MS02 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
TRGV1A0A0A0MS02 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
TRGV1A0A0A0MS02 AL356512.1-201ENST00000607453 1739 ntBASIC23.79■■□□□ 1.4
TRGV1A0A0A0MS02 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
TRGV1A0A0A0MS02 HES6-203ENST00000409160 1600 ntTSL 2 BASIC23.57■■□□□ 1.36
TRGV1A0A0A0MS02 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TRGV1A0A0A0MS02 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC23.45■■□□□ 1.34
TRGV1A0A0A0MS02 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TRGV1A0A0A0MS02 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC23.34■■□□□ 1.33
TRGV1A0A0A0MS02 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC23.17■■□□□ 1.3
TRGV1A0A0A0MS02 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRGV1A0A0A0MS02 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC23.05■■□□□ 1.28
TRGV1A0A0A0MS02 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
TRGV1A0A0A0MS02 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC22.77■■□□□ 1.24
TRGV1A0A0A0MS02 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
TRGV1A0A0A0MS02 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC22.55■■□□□ 1.2
TRGV1A0A0A0MS02 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC22.49■■□□□ 1.19
TRGV1A0A0A0MS02 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
TRGV1A0A0A0MS02 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC22.41■■□□□ 1.18
TRGV1A0A0A0MS02 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC22.38■■□□□ 1.17
TRGV1A0A0A0MS02 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
TRGV1A0A0A0MS02 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
TRGV1A0A0A0MS02 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
TRGV1A0A0A0MS02 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
TRGV1A0A0A0MS02 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
TRGV1A0A0A0MS02 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
TRGV1A0A0A0MS02 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
TRGV1A0A0A0MS02 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC22.23■■□□□ 1.15
TRGV1A0A0A0MS02 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
TRGV1A0A0A0MS02 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TRGV1A0A0A0MS02 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC22.08■■□□□ 1.13
TRGV1A0A0A0MS02 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
TRGV1A0A0A0MS02 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC21.98■■□□□ 1.11
TRGV1A0A0A0MS02 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TRGV1A0A0A0MS02 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRGV1A0A0A0MS02 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC21.86■■□□□ 1.09
TRGV1A0A0A0MS02 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRGV1A0A0A0MS02 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRGV1A0A0A0MS02 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
TRGV1A0A0A0MS02 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRGV1A0A0A0MS02 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRGV1A0A0A0MS02 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC21.72■■□□□ 1.07
TRGV1A0A0A0MS02 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRGV1A0A0A0MS02 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRGV1A0A0A0MS02 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TRGV1A0A0A0MS02 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
TRGV1A0A0A0MS02 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRGV1A0A0A0MS02 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC21.49■■□□□ 1.03
TRGV1A0A0A0MS02 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
TRGV1A0A0A0MS02 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRGV1A0A0A0MS02 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC21.47■■□□□ 1.03
TRGV1A0A0A0MS02 ILK-212ENST00000532063 1617 ntTSL 2 BASIC21.44■■□□□ 1.02
TRGV1A0A0A0MS02 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TRGV1A0A0A0MS02 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC21.43■■□□□ 1.02
TRGV1A0A0A0MS02 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRGV1A0A0A0MS02 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRGV1A0A0A0MS02 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRGV1A0A0A0MS02 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRGV1A0A0A0MS02 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TRGV1A0A0A0MS02 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC21.35■■□□□ 1.01
TRGV1A0A0A0MS02 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRGV1A0A0A0MS02 INO80B-203ENST00000409917 796 ntTSL 2 BASIC21.33■■□□□ 1.01
TRGV1A0A0A0MS02 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
TRGV1A0A0A0MS02 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
TRGV1A0A0A0MS02 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRGV1A0A0A0MS02 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRGV1A0A0A0MS02 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRGV1A0A0A0MS02 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC21.21■□□□□ 0.99
TRGV1A0A0A0MS02 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRGV1A0A0A0MS02 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRGV1A0A0A0MS02 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
TRGV1A0A0A0MS02 AC015813.7-201ENST00000623294 581 ntBASIC21.11■□□□□ 0.97
TRGV1A0A0A0MS02 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRGV1A0A0A0MS02 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TRGV1A0A0A0MS02 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TRGV1A0A0A0MS02 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRGV1A0A0A0MS02 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC21.05■□□□□ 0.96
TRGV1A0A0A0MS02 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
TRGV1A0A0A0MS02 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
TRGV1A0A0A0MS02 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
TRGV1A0A0A0MS02 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRGV1A0A0A0MS02 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRGV1A0A0A0MS02 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC20.96■□□□□ 0.95
TRGV1A0A0A0MS02 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRGV1A0A0A0MS02 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRGV1A0A0A0MS02 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRGV1A0A0A0MS02 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRGV1A0A0A0MS02 AC145285.7-201ENST00000614819 1539 ntBASIC20.86■□□□□ 0.93
TRGV1A0A0A0MS02 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC20.86■□□□□ 0.93
TRGV1A0A0A0MS02 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC20.85■□□□□ 0.93
TRGV1A0A0A0MS02 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRGV1A0A0A0MS02 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRGV1A0A0A0MS02 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRGV1A0A0A0MS02 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRGV1A0A0A0MS02 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRGV1A0A0A0MS02 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRGV1A0A0A0MS02 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRGV1A0A0A0MS02 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRGV1A0A0A0MS02 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms