Protein–RNA interactions for Protein: P12956

XRCC6, X-ray repair cross-complementing protein 6, humanhuman

Known RBP eCLIP

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6P12956 TRAPPC12-213ENST00000461577 677 ntTSL 211.81□□□□□ -0.523e-7■□□□□ 10.3
XRCC6P12956 TRAPPC12-221ENST00000489032 561 ntTSL 38.85□□□□□ -0.993e-7■□□□□ 10.3
XRCC6P12956 TRAPPC12-208ENST00000437733 518 ntTSL 57.2□□□□□ -1.263e-7■□□□□ 10.3
XRCC6P12956 SENP6-211ENST00000493959 867 ntTSL 325.22■■□□□ 1.632e-10■□□□□ 10.3
XRCC6P12956 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC23.69■■□□□ 1.382e-10■□□□□ 10.3
XRCC6P12956 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.142e-10■□□□□ 10.3
XRCC6P12956 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.482e-10■□□□□ 10.3
XRCC6P12956 MT-TF-201ENST00000387314 71 ntBASIC1.15□□□□□ -2.233e-51■□□□□ 10.2
XRCC6P12956 H3F3B-203ENST00000586518 1701 nt34.71■■■■□ 3.152e-12■□□□□ 10.2
XRCC6P12956 H3F3B-202ENST00000586270 468 ntTSL 227.47■■□□□ 1.992e-12■□□□□ 10.2
XRCC6P12956 H3F3B-209ENST00000589949 842 ntTSL 220■□□□□ 0.792e-12■□□□□ 10.2
XRCC6P12956 H3F3B-207ENST00000589417 575 ntTSL 219.68■□□□□ 0.742e-12■□□□□ 10.2
XRCC6P12956 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.612e-12■□□□□ 10.2
XRCC6P12956 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.322e-12■□□□□ 10.2
XRCC6P12956 H3F3B-213ENST00000593254 894 ntTSL 514.68□□□□□ -0.062e-12■□□□□ 10.2
XRCC6P12956 H3F3B-205ENST00000587171 586 ntTSL 214.68□□□□□ -0.062e-12■□□□□ 10.2
XRCC6P12956 H3F3B-212ENST00000592643 795 ntTSL 3 BASIC13.23□□□□□ -0.292e-12■□□□□ 10.2
XRCC6P12956 H3F3B-210ENST00000591890 783 ntTSL 3 BASIC11.99□□□□□ -0.492e-12■□□□□ 10.2
XRCC6P12956 H3F3B-204ENST00000586607 551 ntAPPRIS P1 TSL 4 BASIC10.98□□□□□ -0.652e-12■□□□□ 10.2
XRCC6P12956 TMEM259-210ENST00000592618 1877 ntTSL 528.92■■■□□ 2.221e-15■□□□□ 10.2
XRCC6P12956 TMEM259-208ENST00000592052 1637 nt27.69■■■□□ 2.021e-15■□□□□ 10.2
XRCC6P12956 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.961e-15■□□□□ 10.2
XRCC6P12956 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC26.96■■□□□ 1.911e-15■□□□□ 10.2
XRCC6P12956 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC24.2■■□□□ 1.461e-15■□□□□ 10.2
XRCC6P12956 TMEM259-205ENST00000586704 2538 ntTSL 522.21■■□□□ 1.151e-15■□□□□ 10.2
XRCC6P12956 TMEM259-211ENST00000593068 1965 ntTSL 521.61■■□□□ 1.051e-15■□□□□ 10.2
XRCC6P12956 TBX1-205ENST00000484336 529 ntTSL 330.74■■■□□ 2.518e-6■□□□□ 10.2
XRCC6P12956 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC29.98■■■□□ 2.398e-6■□□□□ 10.2
XRCC6P12956 NUP210-202ENST00000420141 3134 ntTSL 1 (best)28.7■■■□□ 2.188e-6■□□□□ 10.2
XRCC6P12956 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC27.92■■■□□ 2.068e-6■□□□□ 10.2
XRCC6P12956 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC26.7■■□□□ 1.878e-6■□□□□ 10.2
XRCC6P12956 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.741e-17■□□□□ 10.2
XRCC6P12956 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.718e-6■□□□□ 10.2
XRCC6P12956 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.638e-6■□□□□ 10.2
XRCC6P12956 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.628e-6■□□□□ 10.2
XRCC6P12956 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC25.04■■□□□ 1.68e-6■□□□□ 10.2
XRCC6P12956 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.588e-6■□□□□ 10.2
XRCC6P12956 RBM38-201ENST00000342690 852 ntTSL 324.46■■□□□ 1.518e-6■□□□□ 10.2
XRCC6P12956 RBM38-205ENST00000440234 686 ntTSL 2 BASIC24.46■■□□□ 1.518e-6■□□□□ 10.2
XRCC6P12956 CXXC5-209ENST00000507139 472 ntTSL 424.15■■□□□ 1.468e-6■□□□□ 10.2
XRCC6P12956 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.358e-6■□□□□ 10.2
XRCC6P12956 CXXC5-206ENST00000504844 777 ntTSL 223.43■■□□□ 1.348e-6■□□□□ 10.2
XRCC6P12956 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.268e-6■□□□□ 10.2
XRCC6P12956 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC22.21■■□□□ 1.158e-6■□□□□ 10.2
XRCC6P12956 RBM38-202ENST00000344785 2193 ntTSL 522.21■■□□□ 1.158e-6■□□□□ 10.2
XRCC6P12956 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.088e-6■□□□□ 10.2
XRCC6P12956 CTDSP1-213ENST00000496785 460 ntTSL 521.51■■□□□ 1.038e-6■□□□□ 10.2
XRCC6P12956 LTBP4-239ENST00000622565 756 ntTSL 421.47■■□□□ 1.038e-6■□□□□ 10.2
XRCC6P12956 SAFB-207ENST00000589863 2708 ntTSL 221.27■■□□□ 18e-6■□□□□ 10.2
XRCC6P12956 CTDSP1-207ENST00000473420 922 ntTSL 321.24■□□□□ 0.998e-6■□□□□ 10.2
XRCC6P12956 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.968e-6■□□□□ 10.2
XRCC6P12956 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.958e-6■□□□□ 10.2
XRCC6P12956 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.958e-6■□□□□ 10.2
XRCC6P12956 ABHD5-201ENST00000013894 833 ntTSL 320.79■□□□□ 0.928e-6■□□□□ 10.2
XRCC6P12956 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.918e-6■□□□□ 10.2
XRCC6P12956 SAFB-213ENST00000592555 1360 ntTSL 520.65■□□□□ 0.98e-6■□□□□ 10.2
XRCC6P12956 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.878e-6■□□□□ 10.2
XRCC6P12956 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.838e-6■□□□□ 10.2
XRCC6P12956 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC20.13■□□□□ 0.811e-17■□□□□ 10.2
XRCC6P12956 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.88e-6■□□□□ 10.2
XRCC6P12956 CTDSP1-215ENST00000498160 877 ntTSL 519.69■□□□□ 0.748e-6■□□□□ 10.2
XRCC6P12956 CTDSP1-203ENST00000431127 586 ntTSL 319.43■□□□□ 0.78e-6■□□□□ 10.2
XRCC6P12956 ADAM10-212ENST00000558004 587 ntTSL 519.38■□□□□ 0.698e-6■□□□□ 10.2
XRCC6P12956 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC19.28■□□□□ 0.688e-6■□□□□ 10.2
XRCC6P12956 CDCA2-203ENST00000518225 464 ntTSL 519.21■□□□□ 0.678e-6■□□□□ 10.2
XRCC6P12956 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.668e-6■□□□□ 10.2
XRCC6P12956 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.638e-6■□□□□ 10.2
XRCC6P12956 LTBP4-209ENST00000594116 420 ntTSL 318.87■□□□□ 0.618e-6■□□□□ 10.2
XRCC6P12956 ADAM10-216ENST00000561149 529 ntTSL 418.73■□□□□ 0.598e-6■□□□□ 10.2
XRCC6P12956 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.558e-6■□□□□ 10.2
XRCC6P12956 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.21■□□□□ 0.518e-6■□□□□ 10.2
XRCC6P12956 CXXC5-202ENST00000502295 503 ntTSL 418.19■□□□□ 0.58e-6■□□□□ 10.2
XRCC6P12956 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.58e-6■□□□□ 10.2
XRCC6P12956 NDUFV3-204ENST00000460740 811 ntTSL 218.14■□□□□ 0.498e-6■□□□□ 10.2
XRCC6P12956 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.498e-6■□□□□ 10.2
XRCC6P12956 DNAJC8-205ENST00000489277 1600 ntTSL 1 (best)18.09■□□□□ 0.498e-6■□□□□ 10.2
XRCC6P12956 LTBP4-218ENST00000597816 692 ntTSL 318■□□□□ 0.478e-6■□□□□ 10.2
XRCC6P12956 LTBP4-214ENST00000595665 576 ntTSL 418■□□□□ 0.478e-6■□□□□ 10.2
XRCC6P12956 LTBP4-207ENST00000593463 573 ntTSL 418■□□□□ 0.478e-6■□□□□ 10.2
XRCC6P12956 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.458e-6■□□□□ 10.2
XRCC6P12956 GMNN-205ENST00000468943 679 ntTSL 217.88■□□□□ 0.458e-6■□□□□ 10.2
XRCC6P12956 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.458e-6■□□□□ 10.2
XRCC6P12956 CTDSP1-209ENST00000488627 1118 ntTSL 317.82■□□□□ 0.448e-6■□□□□ 10.2
XRCC6P12956 CTDSP1-214ENST00000497677 998 ntTSL 217.82■□□□□ 0.448e-6■□□□□ 10.2
XRCC6P12956 LZTR1-216ENST00000495142 720 ntTSL 317.75■□□□□ 0.438e-6■□□□□ 10.2
XRCC6P12956 NDUFV3-203ENST00000460259 2029 ntTSL 217.74■□□□□ 0.438e-6■□□□□ 10.2
XRCC6P12956 CTDSP1-202ENST00000428361 842 ntTSL 517.23■□□□□ 0.358e-6■□□□□ 10.2
XRCC6P12956 CTDSP1-205ENST00000452977 818 ntTSL 517.23■□□□□ 0.358e-6■□□□□ 10.2
XRCC6P12956 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC17.17■□□□□ 0.348e-6■□□□□ 10.2
XRCC6P12956 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.298e-6■□□□□ 10.2
XRCC6P12956 LZTR1-205ENST00000439171 635 ntTSL 516.86■□□□□ 0.298e-6■□□□□ 10.2
XRCC6P12956 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.278e-6■□□□□ 10.2
XRCC6P12956 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC16.7■□□□□ 0.268e-6■□□□□ 10.2
XRCC6P12956 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.268e-6■□□□□ 10.2
XRCC6P12956 LTBP4-237ENST00000622107 590 ntTSL 416.62■□□□□ 0.258e-6■□□□□ 10.2
XRCC6P12956 RBM38-204ENST00000371219 760 ntTSL 2 BASIC16.52■□□□□ 0.248e-6■□□□□ 10.2
XRCC6P12956 MAP3K4-213ENST00000542952 629 ntTSL 416.44■□□□□ 0.228e-6■□□□□ 10.2
XRCC6P12956 LZTR1-213ENST00000491432 527 ntTSL 316.37■□□□□ 0.218e-6■□□□□ 10.2
XRCC6P12956 ADAM10-213ENST00000558733 995 ntTSL 316.34■□□□□ 0.218e-6■□□□□ 10.2
XRCC6P12956 MAP3K4-215ENST00000544041 5444 ntTSL 1 (best)16.31■□□□□ 0.28e-6■□□□□ 10.2
Retrieved 100 of 6,788 protein–RNA pairs in 205.2 ms