RNA–Protein interactions for RNA: ENST00000230056.7

GMNN-201, Transcript of geminin, DNA replication inhibitor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GMNN, Length 1,262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMNN-201ENST00000230056 NISCHQ9Y2I1 1504 aa39.76■■■■□ 3.96
GMNN-201ENST00000230056 CCDC180Q9P1Z9 1646 aa35.57■■■■□ 3.29
GMNN-201ENST00000230056 ABCC9O60706 1549 aa35.27■■■■□ 3.24
GMNN-201ENST00000230056 RB1CC1Q8TDY2 1594 aa33.75■■■□□ 2.99
GMNN-201ENST00000230056 NACADO15069 1562 aa33.6■■■□□ 2.97
GMNN-201ENST00000230056 DCAF8L2P0C7V8 631 aa33.41■■■□□ 2.94
GMNN-201ENST00000230056 MYO15BQ96JP2 1530 aa33.28■■■□□ 2.92
GMNN-201ENST00000230056 ZCCHC6Q5VYS8 1495 aaKnown RBP33.01■■■□□ 2.88
GMNN-201ENST00000230056 DCAF1Q9Y4B6 1507 aa32.92■■■□□ 2.86
GMNN-201ENST00000230056 PABPN1Q86U42 306 aaKnown RBP eCLIP32.87■■■□□ 2.85
GMNN-201ENST00000230056 UNC13AQ9UPW8 1703 aa32.86■■■□□ 2.85
GMNN-201ENST00000230056 DNAJC5BQ9UF47 199 aa32.83■■■□□ 2.85
GMNN-201ENST00000230056 BICRAQ9NZM4 1560 aa32.7■■■□□ 2.82
GMNN-201ENST00000230056 SHROOM4Q9ULL8 1493 aa32.42■■■□□ 2.78
GMNN-201ENST00000230056 SCRIBQ14160 1630 aa32.36■■■□□ 2.77
GMNN-201ENST00000230056 EIF4G1Q04637 1599 aaKnown RBP31.9■■■□□ 2.7
GMNN-201ENST00000230056 CC2D2AQ9P2K1 1620 aa31.88■■■□□ 2.69
GMNN-201ENST00000230056 CECR2Q9BXF3 1484 aa31.78■■■□□ 2.68
GMNN-201ENST00000230056 NCAPD3P42695 1498 aa31.02■■■□□ 2.56
GMNN-201ENST00000230056 SMARCA4P51532 1647 aa30.94■■■□□ 2.54
GMNN-201ENST00000230056 ATAD2BQ9ULI0 1458 aa30.93■■■□□ 2.54
GMNN-201ENST00000230056 SMARCA2P51531 1590 aa30.89■■■□□ 2.54
GMNN-201ENST00000230056 BAZ1AQ9NRL2 1556 aaPredicted RBP30.88■■■□□ 2.53
GMNN-201ENST00000230056 HMGXB3Q12766 1538 aa30.81■■■□□ 2.52
GMNN-201ENST00000230056 PEG3Q9GZU2 1588 aa30.69■■■□□ 2.5
GMNN-201ENST00000230056 BAZ1BQ9UIG0 1483 aaKnown RBP30.65■■■□□ 2.5
GMNN-201ENST00000230056 MROH2BQ7Z745 1585 aa30.6■■■□□ 2.49
GMNN-201ENST00000230056 ERCC6Q03468 1493 aa30.48■■■□□ 2.47
GMNN-201ENST00000230056 CUX2O14529 1486 aa30.38■■■□□ 2.45
GMNN-201ENST00000230056 NESP48681 1621 aa30.35■■■□□ 2.45
GMNN-201ENST00000230056 LAMC3Q9Y6N6 1575 aa30.27■■■□□ 2.44
GMNN-201ENST00000230056 WIZO95785 1651 aa30.21■■■□□ 2.43
GMNN-201ENST00000230056 PDS5BQ9NTI5 1447 aa30.11■■■□□ 2.41
GMNN-201ENST00000230056 RSF1Q96T23 1441 aaPredicted RBP30.1■■■□□ 2.41
GMNN-201ENST00000230056 CADPSQ9ULU8 1353 aa30.08■■■□□ 2.41
GMNN-201ENST00000230056 DNAJC5Q9H3Z4 198 aa30.04■■■□□ 2.4
GMNN-201ENST00000230056 THOC2Q8NI27 1593 aaKnown RBP30.02■■■□□ 2.4
GMNN-201ENST00000230056 KIF21AQ7Z4S6 1674 aa29.95■■■□□ 2.39
GMNN-201ENST00000230056 TOP2AP11388 1531 aaKnown RBP29.92■■■□□ 2.38
GMNN-201ENST00000230056 MRC2Q9UBG0 1479 aa29.8■■■□□ 2.36
GMNN-201ENST00000230056 CFTRP13569 1480 aa29.79■■■□□ 2.36
GMNN-201ENST00000230056 CEP164Q9UPV0 1460 aa29.74■■■□□ 2.35
GMNN-201ENST00000230056 FANCD2Q9BXW9 1451 aa29.72■■■□□ 2.35
GMNN-201ENST00000230056 WDR62O43379 1518 aa29.71■■■□□ 2.35
GMNN-201ENST00000230056 CCDC88BA6NC98 1476 aa29.56■■■□□ 2.32
GMNN-201ENST00000230056 PRDM2Q13029 1718 aa29.44■■■□□ 2.3
GMNN-201ENST00000230056 URB2Q14146 1524 aaKnown RBP29.43■■■□□ 2.3
GMNN-201ENST00000230056 ABCC8Q09428 1581 aa29.21■■■□□ 2.27
GMNN-201ENST00000230056 AEBP2Q6ZN18 517 aaPredicted RBP29.2■■■□□ 2.26
GMNN-201ENST00000230056 TOPBP1Q92547 1522 aa29.17■■■□□ 2.26
GMNN-201ENST00000230056 IFT140Q96RY7 1462 aa29.15■■■□□ 2.26
GMNN-201ENST00000230056 DNMBPQ6XZF7 1577 aa29.09■■■□□ 2.25
GMNN-201ENST00000230056 OSCARQ8IYS5 282 aa29.03■■■□□ 2.24
GMNN-201ENST00000230056 ZNF608Q9ULD9 1512 aaPredicted RBP28.99■■■□□ 2.23
GMNN-201ENST00000230056 SUPT5HO00267 1087 aaKnown RBP28.92■■■□□ 2.22
GMNN-201ENST00000230056 POLA1P09884 1462 aaPredicted RBP28.89■■■□□ 2.22
GMNN-201ENST00000230056 TARBP1Q13395 1621 aaKnown RBP28.87■■■□□ 2.21
GMNN-201ENST00000230056 EIF4G3O43432 1585 aaKnown RBP28.86■■■□□ 2.21
GMNN-201ENST00000230056 AQRO60306 1485 aaKnown RBP eCLIP28.78■■■□□ 2.24e-7■■□□□ 11.7
GMNN-201ENST00000230056 SOGA1O94964 1423 aa28.78■■■□□ 2.2
GMNN-201ENST00000230056 TRIM41Q8WV44 630 aa28.76■■■□□ 2.19
GMNN-201ENST00000230056 FGD5Q6ZNL6 1462 aa28.74■■■□□ 2.19
GMNN-201ENST00000230056 RAD54L2Q9Y4B4 1467 aa28.74■■■□□ 2.19
GMNN-201ENST00000230056 CUX1P39880 1505 aa28.74■■■□□ 2.19
GMNN-201ENST00000230056 WDR97A6NE52 1622 aa28.69■■■□□ 2.18
GMNN-201ENST00000230056 TDRD9Q8NDG6 1382 aaKnown RBP28.66■■■□□ 2.18
GMNN-201ENST00000230056 CHD1O14646 1710 aa28.56■■■□□ 2.16
GMNN-201ENST00000230056 FBLN2P98095 1184 aa28.55■■■□□ 2.16
GMNN-201ENST00000230056 RIMBP3CA6NJZ7 1639 aa28.54■■■□□ 2.16
GMNN-201ENST00000230056 RIMBP3BA6NNM3 1639 aa28.54■■■□□ 2.16
GMNN-201ENST00000230056 RIMBP3Q9UFD9 1639 aa28.54■■■□□ 2.16
GMNN-201ENST00000230056 GRIN2BQ13224 1484 aa28.52■■■□□ 2.16
GMNN-201ENST00000230056 ARHGEF11O15085 1522 aa28.51■■■□□ 2.15
GMNN-201ENST00000230056 SNAPC4Q5SXM2 1469 aa28.51■■■□□ 2.15
GMNN-201ENST00000230056 MAGI1Q96QZ7 1491 aaPredicted RBP28.5■■■□□ 2.15
GMNN-201ENST00000230056 ABCA10Q8WWZ4 1543 aa28.46■■■□□ 2.15
GMNN-201ENST00000230056 GAPVD1Q14C86 1478 aa28.44■■■□□ 2.14
GMNN-201ENST00000230056 CHMP7Q8WUX9 453 aaPredicted RBP28.43■■■□□ 2.14
GMNN-201ENST00000230056 WRNQ14191 1432 aaPredicted RBP eCLIP28.43■■■□□ 2.14
GMNN-201ENST00000230056 SYNJ2O15056 1496 aa28.39■■■□□ 2.13
GMNN-201ENST00000230056 TOP2BQ02880 1626 aa28.37■■■□□ 2.13
GMNN-201ENST00000230056 BIVM-ERCC5R4GMW8 1640 aa28.36■■■□□ 2.13
GMNN-201ENST00000230056 ABCA5Q8WWZ7 1642 aa28.36■■■□□ 2.13
GMNN-201ENST00000230056 SYNJ1O43426 1573 aa28.34■■■□□ 2.13
GMNN-201ENST00000230056 PBRM1Q86U86 1689 aa28.34■■■□□ 2.13
GMNN-201ENST00000230056 CLASP1Q7Z460 1538 aa28.3■■■□□ 2.12
GMNN-201ENST00000230056 CYB5RLQ6IPT4 315 aa28.28■■■□□ 2.12
GMNN-201ENST00000230056 CHIC1Q5VXU3 224 aa28.27■■■□□ 2.12
GMNN-201ENST00000230056 ARAP1Q96P48 1450 aa28.23■■■□□ 2.11
GMNN-201ENST00000230056 GRIN2AQ12879 1464 aa28.14■■■□□ 2.09
GMNN-201ENST00000230056 ADAMTS12P58397 1594 aa28.12■■■□□ 2.09
GMNN-201ENST00000230056 ERICH3Q5RHP9 1530 aa28.12■■■□□ 2.09
GMNN-201ENST00000230056 FHAD1B1AJZ9 1412 aa28.11■■■□□ 2.09
GMNN-201ENST00000230056 NUP160Q12769 1436 aa28.04■■■□□ 2.08
GMNN-201ENST00000230056 CEP170Q5SW79 1584 aa27.98■■■□□ 2.07
GMNN-201ENST00000230056 TRHP20396 242 aaPredicted RBP27.89■■■□□ 2.06
GMNN-201ENST00000230056 KIF27Q86VH2 1401 aa27.87■■■□□ 2.05
GMNN-201ENST00000230056 SHROOM2Q13796 1616 aa27.86■■■□□ 2.05
GMNN-201ENST00000230056 ERCC6L2Q5T890 1561 aa27.82■■■□□ 2.04
GMNN-201ENST00000230056 IGF1RP08069 1367 aa27.8■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms