RNA–Protein interactions for RNA: ENST00000420141.2

NUP210-202, Transcript of nucleoporin 210, humanhuman

TSL 1 (best)

Gene NUP210, Length 3,134 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP210-202ENST00000420141 NISCHQ9Y2I1 1504 aa45.61■■■■■ 4.89
NUP210-202ENST00000420141 SHROOM4Q9ULL8 1493 aa40.46■■■■■ 4.07
NUP210-202ENST00000420141 SUPT5HO00267 1087 aaKnown RBP39.85■■■■□ 3.97
NUP210-202ENST00000420141 DCAF8L2P0C7V8 631 aa39.28■■■■□ 3.88
NUP210-202ENST00000420141 ZCCHC6Q5VYS8 1495 aaKnown RBP38.52■■■■□ 3.76
NUP210-202ENST00000420141 CHIC1Q5VXU3 224 aa38.35■■■■□ 3.73
NUP210-202ENST00000420141 MYO15BQ96JP2 1530 aa38.3■■■■□ 3.72
NUP210-202ENST00000420141 PCGF6Q9BYE7 350 aa38.02■■■■□ 3.68
NUP210-202ENST00000420141 CCDC180Q9P1Z9 1646 aa37.99■■■■□ 3.67
NUP210-202ENST00000420141 LOC105371045A0A1W2PR82 267 aa37.76■■■■□ 3.64
NUP210-202ENST00000420141 HRCP23327 699 aa37.73■■■■□ 3.63
NUP210-202ENST00000420141 PPARGC1BQ86YN6 1023 aaKnown RBP37.61■■■■□ 3.61
NUP210-202ENST00000420141 EHMT2Q96KQ7 1210 aa37.21■■■■□ 3.55
NUP210-202ENST00000420141 FAM9AQ8IZU1 332 aaPredicted RBP37.03■■■■□ 3.52
NUP210-202ENST00000420141 DCAF1Q9Y4B6 1507 aa36.79■■■■□ 3.48
NUP210-202ENST00000420141 TRIM41Q8WV44 630 aa36.69■■■■□ 3.46
NUP210-202ENST00000420141 SCRIBQ14160 1630 aa36.65■■■■□ 3.46
NUP210-202ENST00000420141 TRIM26Q12899 539 aaPredicted RBP36.63■■■■□ 3.45
NUP210-202ENST00000420141 RSF1Q96T23 1441 aaPredicted RBP36.49■■■■□ 3.43
NUP210-202ENST00000420141 ABCC9O60706 1549 aa36.37■■■■□ 3.41
NUP210-202ENST00000420141 RB1CC1Q8TDY2 1594 aa36.23■■■■□ 3.39
NUP210-202ENST00000420141 CECR2Q9BXF3 1484 aa36.05■■■■□ 3.36
NUP210-202ENST00000420141 TTBK1Q5TCY1 1321 aaPredicted RBP35.99■■■■□ 3.35
NUP210-202ENST00000420141 MROH2BQ7Z745 1585 aa35.77■■■■□ 3.32
NUP210-202ENST00000420141 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.68■■■■□ 3.3
NUP210-202ENST00000420141 ZEB1P37275 1124 aaPredicted RBP35.66■■■■□ 3.3
NUP210-202ENST00000420141 WIZO95785 1651 aa35.6■■■■□ 3.29
NUP210-202ENST00000420141 CCER1Q8TC90 406 aaPredicted RBP35.43■■■■□ 3.26
NUP210-202ENST00000420141 NACADO15069 1562 aa35.3■■■■□ 3.24
NUP210-202ENST00000420141 SCAF1Q9H7N4 1312 aaKnown RBP35.27■■■■□ 3.24
NUP210-202ENST00000420141 ABCC8Q09428 1581 aa35.19■■■■□ 3.22
NUP210-202ENST00000420141 PABPN1Q86U42 306 aaKnown RBP eCLIP35.09■■■■□ 3.21
NUP210-202ENST00000420141 UBTFP17480 764 aaKnown RBP35.08■■■■□ 3.21
NUP210-202ENST00000420141 CCDC88BA6NC98 1476 aa35.07■■■■□ 3.21
NUP210-202ENST00000420141 SOGA1O94964 1423 aa34.98■■■■□ 3.19
NUP210-202ENST00000420141 RANGAP1P46060 587 aaPredicted RBP34.97■■■■□ 3.19
NUP210-202ENST00000420141 BAZ1AQ9NRL2 1556 aaPredicted RBP34.94■■■■□ 3.18
NUP210-202ENST00000420141 RUSC2Q8N2Y8 1516 aa34.85■■■■□ 3.17
NUP210-202ENST00000420141 CEP162Q5TB80 1403 aa34.8■■■■□ 3.16
NUP210-202ENST00000420141 NEUROD1Q13562 356 aa34.79■■■■□ 3.16
NUP210-202ENST00000420141 DIEXFQ68CQ4 756 aaKnown RBP34.79■■■■□ 3.16
NUP210-202ENST00000420141 CSRNP3Q8WYN3 585 aa34.75■■■■□ 3.15
NUP210-202ENST00000420141 EIF4G1Q04637 1599 aaKnown RBP34.72■■■■□ 3.15
NUP210-202ENST00000420141 HNRNPUL2Q1KMD3 747 aaKnown RBP34.7■■■■□ 3.15
NUP210-202ENST00000420141 TOP2AP11388 1531 aaKnown RBP34.64■■■■□ 3.14
NUP210-202ENST00000420141 SMARCA2P51531 1590 aa34.61■■■■□ 3.13
NUP210-202ENST00000420141 SMARCA4P51532 1647 aa34.61■■■■□ 3.13
NUP210-202ENST00000420141 ACIN1Q9UKV3 1341 aaKnown RBP34.6■■■■□ 3.13
NUP210-202ENST00000420141 YTHDC1Q96MU7 727 aaKnown RBP34.58■■■■□ 3.13
NUP210-202ENST00000420141 GTF3C3Q9Y5Q9 886 aa34.51■■■■□ 3.11
NUP210-202ENST00000420141 TNIKQ9UKE5 1360 aa34.48■■■■□ 3.11
NUP210-202ENST00000420141 WRNQ14191 1432 aaPredicted RBP eCLIP34.38■■■■□ 3.097e-7■■■■■ 52.5
NUP210-202ENST00000420141 UNC13AQ9UPW8 1703 aa34.34■■■■□ 3.09
NUP210-202ENST00000420141 CENPBP07199 599 aaPredicted RBP34.28■■■■□ 3.08
NUP210-202ENST00000420141 ZNF316A6NFI3 1004 aaPredicted RBP34.26■■■■□ 3.07
NUP210-202ENST00000420141 GOLGA3Q08378 1498 aa34.22■■■■□ 3.07
NUP210-202ENST00000420141 APLP2Q06481 763 aa34.19■■■■□ 3.06
NUP210-202ENST00000420141 PELP1Q8IZL8 1130 aaKnown RBP34.18■■■■□ 3.06
NUP210-202ENST00000420141 MIER1Q8N108 512 aa34.12■■■■□ 3.05
NUP210-202ENST00000420141 CLIP1P30622 1438 aa34.09■■■■□ 3.05
NUP210-202ENST00000420141 EEA1Q15075 1411 aa34.09■■■■□ 3.05
NUP210-202ENST00000420141 SYNJ1O43426 1573 aa34.05■■■■□ 3.04
NUP210-202ENST00000420141 BICRAQ9NZM4 1560 aa33.98■■■■□ 3.03
NUP210-202ENST00000420141 RAPGEF2Q9Y4G8 1499 aa33.97■■■■□ 3.03
NUP210-202ENST00000420141 CEP164Q9UPV0 1460 aa33.93■■■■□ 3.02
NUP210-202ENST00000420141 ITGAEP38570 1179 aa33.86■■■■□ 3.01
NUP210-202ENST00000420141 BAZ1BQ9UIG0 1483 aaKnown RBP33.82■■■■□ 3
NUP210-202ENST00000420141 ATAD2BQ9ULI0 1458 aa33.8■■■■□ 3
NUP210-202ENST00000420141 VPS8Q8N3P4 1428 aa33.79■■■■□ 3
NUP210-202ENST00000420141 KANK4Q5T7N3 995 aaPredicted RBP33.76■■■■□ 3
NUP210-202ENST00000420141 KIF21BO75037 1637 aa33.61■■■□□ 2.97
NUP210-202ENST00000420141 PEG3Q9GZU2 1588 aa33.51■■■□□ 2.96
NUP210-202ENST00000420141 ATP1B4Q9UN42 357 aaPredicted RBP33.39■■■□□ 2.94
NUP210-202ENST00000420141 DHX57Q6P158 1386 aaKnown RBP33.39■■■□□ 2.94
NUP210-202ENST00000420141 ARAP1Q96P48 1450 aa33.34■■■□□ 2.93
NUP210-202ENST00000420141 P3H3Q8IVL6 736 aa33.33■■■□□ 2.93
NUP210-202ENST00000420141 TOP2BQ02880 1626 aa33.3■■■□□ 2.92
NUP210-202ENST00000420141 KCNH8Q96L42 1107 aa33.22■■■□□ 2.91
NUP210-202ENST00000420141 PRXQ9BXM0 1461 aa33.22■■■□□ 2.91
NUP210-202ENST00000420141 CUX1P39880 1505 aa33.17■■■□□ 2.9
NUP210-202ENST00000420141 KIF27Q86VH2 1401 aa33.14■■■□□ 2.9
NUP210-202ENST00000420141 FAM50AQ14320 339 aaKnown RBP33.13■■■□□ 2.89
NUP210-202ENST00000420141 HIRIP3Q9BW71 556 aaPredicted RBP33.13■■■□□ 2.89
NUP210-202ENST00000420141 CCNB3Q8WWL7 1395 aa33.07■■■□□ 2.89
NUP210-202ENST00000420141 SIN3AQ96ST3 1273 aa33.06■■■□□ 2.88
NUP210-202ENST00000420141 ARHGAP35Q9NRY4 1499 aa33.02■■■□□ 2.88
NUP210-202ENST00000420141 BIVM-ERCC5R4GMW8 1640 aa33■■■□□ 2.87
NUP210-202ENST00000420141 ERICH3Q5RHP9 1530 aa32.98■■■□□ 2.87
NUP210-202ENST00000420141 CUX2O14529 1486 aa32.96■■■□□ 2.87
NUP210-202ENST00000420141 SUPT16HQ9Y5B9 1047 aaKnown RBP32.96■■■□□ 2.87
NUP210-202ENST00000420141 RAB3GAP2Q9H2M9 1393 aa32.96■■■□□ 2.87
NUP210-202ENST00000420141 BCANQ96GW7 911 aa32.95■■■□□ 2.87
NUP210-202ENST00000420141 DDX10Q13206 875 aaKnown RBP32.94■■■□□ 2.86
NUP210-202ENST00000420141 CLSPNQ9HAW4 1339 aa32.94■■■□□ 2.86
NUP210-202ENST00000420141 RRBP1Q9P2E9 1410 aaKnown RBP32.91■■■□□ 2.86
NUP210-202ENST00000420141 IGF1RP08069 1367 aa32.87■■■□□ 2.85
NUP210-202ENST00000420141 NCAPD3P42695 1498 aa32.87■■■□□ 2.85
NUP210-202ENST00000420141 CFTRP13569 1480 aa32.8■■■□□ 2.84
NUP210-202ENST00000420141 CARMIL1Q5VZK9 1371 aa32.79■■■□□ 2.84
NUP210-202ENST00000420141 PHLDB1Q86UU1 1377 aa32.77■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms