RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 NISCHQ9Y2I1 1504 aa39.02■■■■□ 3.84
CTDSP1-209ENST00000488627 CCDC180Q9P1Z9 1646 aa34.59■■■■□ 3.13
CTDSP1-209ENST00000488627 ABCC9O60706 1549 aa34.14■■■■□ 3.06
CTDSP1-209ENST00000488627 DCAF8L2P0C7V8 631 aa32.71■■■□□ 2.83
CTDSP1-209ENST00000488627 RB1CC1Q8TDY2 1594 aa32.69■■■□□ 2.82
CTDSP1-209ENST00000488627 NACADO15069 1562 aa32.66■■■□□ 2.82
CTDSP1-209ENST00000488627 MYO15BQ96JP2 1530 aa32.47■■■□□ 2.79
CTDSP1-209ENST00000488627 ZCCHC6Q5VYS8 1495 aaKnown RBP32.46■■■□□ 2.79
CTDSP1-209ENST00000488627 DCAF1Q9Y4B6 1507 aa32.26■■■□□ 2.76
CTDSP1-209ENST00000488627 PABPN1Q86U42 306 aaKnown RBP eCLIP31.97■■■□□ 2.716e-15■■■■■ 28.9
CTDSP1-209ENST00000488627 UNC13AQ9UPW8 1703 aa31.84■■■□□ 2.69
CTDSP1-209ENST00000488627 BICRAQ9NZM4 1560 aa31.79■■■□□ 2.68
CTDSP1-209ENST00000488627 DNAJC5BQ9UF47 199 aa31.64■■■□□ 2.66
CTDSP1-209ENST00000488627 SCRIBQ14160 1630 aa31.61■■■□□ 2.65
CTDSP1-209ENST00000488627 SHROOM4Q9ULL8 1493 aa31.4■■■□□ 2.62
CTDSP1-209ENST00000488627 EIF4G1Q04637 1599 aaKnown RBP30.92■■■□□ 2.54
CTDSP1-209ENST00000488627 CC2D2AQ9P2K1 1620 aa30.82■■■□□ 2.52
CTDSP1-209ENST00000488627 CECR2Q9BXF3 1484 aa30.7■■■□□ 2.5
CTDSP1-209ENST00000488627 SMARCA4P51532 1647 aa30.24■■■□□ 2.43
CTDSP1-209ENST00000488627 NCAPD3P42695 1498 aa30.24■■■□□ 2.43
CTDSP1-209ENST00000488627 ATAD2BQ9ULI0 1458 aa30.21■■■□□ 2.43
CTDSP1-209ENST00000488627 BAZ1AQ9NRL2 1556 aaPredicted RBP30.2■■■□□ 2.42
CTDSP1-209ENST00000488627 SMARCA2P51531 1590 aa30.08■■■□□ 2.41
CTDSP1-209ENST00000488627 MROH2BQ7Z745 1585 aa30.08■■■□□ 2.41
CTDSP1-209ENST00000488627 PEG3Q9GZU2 1588 aa29.98■■■□□ 2.39
CTDSP1-209ENST00000488627 HMGXB3Q12766 1538 aa29.97■■■□□ 2.39
CTDSP1-209ENST00000488627 BAZ1BQ9UIG0 1483 aaKnown RBP29.89■■■□□ 2.38
CTDSP1-209ENST00000488627 RSF1Q96T23 1441 aaPredicted RBP29.74■■■□□ 2.35
CTDSP1-209ENST00000488627 WIZO95785 1651 aa29.66■■■□□ 2.34
CTDSP1-209ENST00000488627 NESP48681 1621 aa29.53■■■□□ 2.32
CTDSP1-209ENST00000488627 ERCC6Q03468 1493 aa29.38■■■□□ 2.29
CTDSP1-209ENST00000488627 TOP2AP11388 1531 aaKnown RBP29.36■■■□□ 2.29
CTDSP1-209ENST00000488627 CADPSQ9ULU8 1353 aa29.36■■■□□ 2.29
CTDSP1-209ENST00000488627 LAMC3Q9Y6N6 1575 aa29.34■■■□□ 2.29
CTDSP1-209ENST00000488627 PDS5BQ9NTI5 1447 aa29.22■■■□□ 2.27
CTDSP1-209ENST00000488627 CUX2O14529 1486 aa29.16■■■□□ 2.26
CTDSP1-209ENST00000488627 CFTRP13569 1480 aa29.13■■■□□ 2.25
CTDSP1-209ENST00000488627 CCDC88BA6NC98 1476 aa29.1■■■□□ 2.25
CTDSP1-209ENST00000488627 THOC2Q8NI27 1593 aaKnown RBP29.01■■■□□ 2.24
CTDSP1-209ENST00000488627 KIF21AQ7Z4S6 1674 aa29■■■□□ 2.23
CTDSP1-209ENST00000488627 FANCD2Q9BXW9 1451 aa28.96■■■□□ 2.23
CTDSP1-209ENST00000488627 MRC2Q9UBG0 1479 aa28.91■■■□□ 2.22
CTDSP1-209ENST00000488627 CEP164Q9UPV0 1460 aa28.9■■■□□ 2.22
CTDSP1-209ENST00000488627 SUPT5HO00267 1087 aaKnown RBP28.86■■■□□ 2.21
CTDSP1-209ENST00000488627 WDR62O43379 1518 aa28.8■■■□□ 2.2
CTDSP1-209ENST00000488627 URB2Q14146 1524 aaKnown RBP28.69■■■□□ 2.18
CTDSP1-209ENST00000488627 PRDM2Q13029 1718 aa28.6■■■□□ 2.17
CTDSP1-209ENST00000488627 DNAJC5Q9H3Z4 198 aa28.56■■■□□ 2.16
CTDSP1-209ENST00000488627 TOPBP1Q92547 1522 aa28.48■■■□□ 2.15
CTDSP1-209ENST00000488627 ABCC8Q09428 1581 aa28.44■■■□□ 2.14
CTDSP1-209ENST00000488627 DNMBPQ6XZF7 1577 aa28.37■■■□□ 2.13
CTDSP1-209ENST00000488627 IFT140Q96RY7 1462 aa28.33■■■□□ 2.13
CTDSP1-209ENST00000488627 ZNF608Q9ULD9 1512 aaPredicted RBP28.25■■■□□ 2.11
CTDSP1-209ENST00000488627 POLA1P09884 1462 aaPredicted RBP28.24■■■□□ 2.11
CTDSP1-209ENST00000488627 CUX1P39880 1505 aa28.22■■■□□ 2.11
CTDSP1-209ENST00000488627 SOGA1O94964 1423 aa28.15■■■□□ 2.1
CTDSP1-209ENST00000488627 RAD54L2Q9Y4B4 1467 aa28.15■■■□□ 2.1
CTDSP1-209ENST00000488627 TARBP1Q13395 1621 aaKnown RBP28.14■■■□□ 2.09
CTDSP1-209ENST00000488627 FGD5Q6ZNL6 1462 aa28.13■■■□□ 2.09
CTDSP1-209ENST00000488627 AQRO60306 1485 aaKnown RBP eCLIP28.09■■■□□ 2.096e-12■■■■■ 82.1
CTDSP1-209ENST00000488627 TDRD9Q8NDG6 1382 aaKnown RBP28.03■■■□□ 2.08
CTDSP1-209ENST00000488627 OSCARQ8IYS5 282 aa28.02■■■□□ 2.08
CTDSP1-209ENST00000488627 EIF4G3O43432 1585 aaKnown RBP28.01■■■□□ 2.07
CTDSP1-209ENST00000488627 WRNQ14191 1432 aaPredicted RBP eCLIP27.99■■■□□ 2.07
CTDSP1-209ENST00000488627 TOP2BQ02880 1626 aa27.88■■■□□ 2.05
CTDSP1-209ENST00000488627 SYNJ1O43426 1573 aa27.87■■■□□ 2.05
CTDSP1-209ENST00000488627 ABCA10Q8WWZ4 1543 aa27.87■■■□□ 2.05
CTDSP1-209ENST00000488627 WDR97A6NE52 1622 aa27.85■■■□□ 2.05
CTDSP1-209ENST00000488627 BIVM-ERCC5R4GMW8 1640 aa27.83■■■□□ 2.05
CTDSP1-209ENST00000488627 GRIN2BQ13224 1484 aa27.8■■■□□ 2.04
CTDSP1-209ENST00000488627 GAPVD1Q14C86 1478 aa27.79■■■□□ 2.04
CTDSP1-209ENST00000488627 SNAPC4Q5SXM2 1469 aa27.77■■■□□ 2.04
CTDSP1-209ENST00000488627 FBLN2P98095 1184 aa27.76■■■□□ 2.03
CTDSP1-209ENST00000488627 MAGI1Q96QZ7 1491 aaPredicted RBP27.72■■■□□ 2.03
CTDSP1-209ENST00000488627 ABCA5Q8WWZ7 1642 aa27.7■■■□□ 2.02
CTDSP1-209ENST00000488627 CHMP7Q8WUX9 453 aaPredicted RBP27.68■■■□□ 2.02
CTDSP1-209ENST00000488627 SYNJ2O15056 1496 aa27.63■■■□□ 2.01
CTDSP1-209ENST00000488627 CHD1O14646 1710 aa27.61■■■□□ 2.01
CTDSP1-209ENST00000488627 PBRM1Q86U86 1689 aa27.56■■■□□ 2
CTDSP1-209ENST00000488627 TRIM41Q8WV44 630 aa27.49■■□□□ 1.99
CTDSP1-209ENST00000488627 ERICH3Q5RHP9 1530 aa27.49■■□□□ 1.99
CTDSP1-209ENST00000488627 FHAD1B1AJZ9 1412 aa27.48■■□□□ 1.99
CTDSP1-209ENST00000488627 ARHGEF11O15085 1522 aa27.47■■□□□ 1.99
CTDSP1-209ENST00000488627 CLASP1Q7Z460 1538 aa27.45■■□□□ 1.98
CTDSP1-209ENST00000488627 RIMBP3CA6NJZ7 1639 aa27.44■■□□□ 1.98
CTDSP1-209ENST00000488627 RIMBP3BA6NNM3 1639 aa27.44■■□□□ 1.98
CTDSP1-209ENST00000488627 RIMBP3Q9UFD9 1639 aa27.44■■□□□ 1.98
CTDSP1-209ENST00000488627 ADAMTS12P58397 1594 aa27.43■■□□□ 1.98
CTDSP1-209ENST00000488627 GRIN2AQ12879 1464 aa27.43■■□□□ 1.98
CTDSP1-209ENST00000488627 IGF1RP08069 1367 aa27.42■■□□□ 1.98
CTDSP1-209ENST00000488627 KIF27Q86VH2 1401 aa27.41■■□□□ 1.98
CTDSP1-209ENST00000488627 NUP160Q12769 1436 aa27.36■■□□□ 1.97
CTDSP1-209ENST00000488627 CYB5RLQ6IPT4 315 aa27.32■■□□□ 1.96
CTDSP1-209ENST00000488627 CEP170Q5SW79 1584 aa27.28■■□□□ 1.96
CTDSP1-209ENST00000488627 ARAP1Q96P48 1450 aa27.27■■□□□ 1.96
CTDSP1-209ENST00000488627 CARMIL1Q5VZK9 1371 aa27.2■■□□□ 1.94
CTDSP1-209ENST00000488627 RUSC2Q8N2Y8 1516 aa27.17■■□□□ 1.94
CTDSP1-209ENST00000488627 JPH4Q96JJ6 628 aa27.14■■□□□ 1.94
CTDSP1-209ENST00000488627 CUL7Q14999 1698 aa27.12■■□□□ 1.93
CTDSP1-209ENST00000488627 ERCC6L2Q5T890 1561 aa27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms