RNA–Protein interactions for RNA: ENST00000425528.5

TNPO2-202, Transcript of transportin 2, humanhuman

APPRIS P4 TSL 5 BASIC

Gene TNPO2, Length 5,122 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO2-202ENST00000425528 NISCHQ9Y2I1 1504 aa24.91■■□□□ 1.58
TNPO2-202ENST00000425528 DCAF8L2P0C7V8 631 aa24.54■■□□□ 1.52
TNPO2-202ENST00000425528 SUPT5HO00267 1087 aaKnown RBP23.76■■□□□ 1.39
TNPO2-202ENST00000425528 SHROOM4Q9ULL8 1493 aa23.45■■□□□ 1.35
TNPO2-202ENST00000425528 EHMT2Q96KQ7 1210 aa22.57■■□□□ 1.2
TNPO2-202ENST00000425528 PCGF6Q9BYE7 350 aa22.36■■□□□ 1.17
TNPO2-202ENST00000425528 APLP2Q06481 763 aa22.36■■□□□ 1.17
TNPO2-202ENST00000425528 PELP1Q8IZL8 1130 aaKnown RBP22.29■■□□□ 1.16
TNPO2-202ENST00000425528 FAM9AQ8IZU1 332 aaPredicted RBP22.28■■□□□ 1.16
TNPO2-202ENST00000425528 ZEB1P37275 1124 aaPredicted RBP22.18■■□□□ 1.14
TNPO2-202ENST00000425528 TRIM41Q8WV44 630 aa22.14■■□□□ 1.13
TNPO2-202ENST00000425528 TTBK1Q5TCY1 1321 aaPredicted RBP21.89■■□□□ 1.09
TNPO2-202ENST00000425528 CENPBP07199 599 aaPredicted RBP21.84■■□□□ 1.09
TNPO2-202ENST00000425528 CCER1Q8TC90 406 aaPredicted RBP21.84■■□□□ 1.09
TNPO2-202ENST00000425528 UBTFP17480 764 aaKnown RBP21.68■■□□□ 1.06
TNPO2-202ENST00000425528 TRIM26Q12899 539 aaPredicted RBP21.66■■□□□ 1.06
TNPO2-202ENST00000425528 MYT1Q01538 1121 aa21.63■■□□□ 1.05
TNPO2-202ENST00000425528 RANGAP1P46060 587 aaPredicted RBP21.6■■□□□ 1.05
TNPO2-202ENST00000425528 CHIC1Q5VXU3 224 aa21.59■■□□□ 1.05
TNPO2-202ENST00000425528 HRCP23327 699 aa21.58■■□□□ 1.04
TNPO2-202ENST00000425528 ATP1B4Q9UN42 357 aaPredicted RBP21.37■■□□□ 1.01
TNPO2-202ENST00000425528 LOC105371045A0A1W2PR82 267 aa21.34■■□□□ 1.01
TNPO2-202ENST00000425528 PPARGC1BQ86YN6 1023 aaKnown RBP21.31■■□□□ 1
TNPO2-202ENST00000425528 ERICH6Q7L0X2 663 aa21.2■□□□□ 0.98
TNPO2-202ENST00000425528 YTHDC1Q96MU7 727 aaKnown RBP21.19■□□□□ 0.98
TNPO2-202ENST00000425528 NEFLP07196 543 aa21.17■□□□□ 0.98
TNPO2-202ENST00000425528 HNRNPUL2Q1KMD3 747 aaKnown RBP20.91■□□□□ 0.94
TNPO2-202ENST00000425528 ITGAEP38570 1179 aa20.85■□□□□ 0.93
TNPO2-202ENST00000425528 ABCC9O60706 1549 aa20.81■□□□□ 0.92
TNPO2-202ENST00000425528 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.81■□□□□ 0.92
TNPO2-202ENST00000425528 DIEXFQ68CQ4 756 aaKnown RBP20.76■□□□□ 0.91
TNPO2-202ENST00000425528 ZCCHC6Q5VYS8 1495 aaKnown RBP20.75■□□□□ 0.91
TNPO2-202ENST00000425528 CCDC180Q9P1Z9 1646 aa20.56■□□□□ 0.88
TNPO2-202ENST00000425528 PABPN1Q86U42 306 aaKnown RBP eCLIP20.56■□□□□ 0.888e-7■■□□□ 14.5
TNPO2-202ENST00000425528 DCAF1Q9Y4B6 1507 aa20.51■□□□□ 0.87
TNPO2-202ENST00000425528 POLR3GLQ9BT43 218 aa20.47■□□□□ 0.87
TNPO2-202ENST00000425528 FAM50AQ14320 339 aaKnown RBP20.46■□□□□ 0.87
TNPO2-202ENST00000425528 CSRNP3Q8WYN3 585 aa20.41■□□□□ 0.86
TNPO2-202ENST00000425528 SCRIBQ14160 1630 aa20.39■□□□□ 0.85
TNPO2-202ENST00000425528 ZNF316A6NFI3 1004 aaPredicted RBP20.39■□□□□ 0.85
TNPO2-202ENST00000425528 DAXXQ9UER7 740 aaPredicted RBP20.34■□□□□ 0.85
TNPO2-202ENST00000425528 MYT1LQ9UL68 1186 aa20.32■□□□□ 0.84
TNPO2-202ENST00000425528 GTF3C3Q9Y5Q9 886 aa20.31■□□□□ 0.84
TNPO2-202ENST00000425528 NEUROD1Q13562 356 aa20.27■□□□□ 0.84
TNPO2-202ENST00000425528 TRIM52Q96A61 297 aa20.26■□□□□ 0.83
TNPO2-202ENST00000425528 ANP32CO43423 234 aa20.21■□□□□ 0.83
TNPO2-202ENST00000425528 CNGB1Q14028 1251 aaPredicted RBP20.2■□□□□ 0.82
TNPO2-202ENST00000425528 ACIN1Q9UKV3 1341 aaKnown RBP20.2■□□□□ 0.82
TNPO2-202ENST00000425528 RTL5Q5HYW3 569 aaPredicted RBP20.03■□□□□ 0.8
TNPO2-202ENST00000425528 MYO15BQ96JP2 1530 aa20.01■□□□□ 0.79
TNPO2-202ENST00000425528 CLSPNQ9HAW4 1339 aa20.01■□□□□ 0.79
TNPO2-202ENST00000425528 BCANQ96GW7 911 aa19.99■□□□□ 0.79
TNPO2-202ENST00000425528 CDK11AQ9UQ88 783 aaPredicted RBP19.97■□□□□ 0.79
TNPO2-202ENST00000425528 P3H3Q8IVL6 736 aa19.96■□□□□ 0.79
TNPO2-202ENST00000425528 RSF1Q96T23 1441 aaPredicted RBP19.96■□□□□ 0.79
TNPO2-202ENST00000425528 SLC4A1APQ9BWU0 796 aaKnown RBP19.94■□□□□ 0.78
TNPO2-202ENST00000425528 ZNF326Q5BKZ1 582 aaKnown RBP19.92■□□□□ 0.78
TNPO2-202ENST00000425528 EEA1Q15075 1411 aa19.9■□□□□ 0.78
TNPO2-202ENST00000425528 RB1CC1Q8TDY2 1594 aa19.87■□□□□ 0.77
TNPO2-202ENST00000425528 TONSLQ96HA7 1378 aa19.83■□□□□ 0.76
TNPO2-202ENST00000425528 NACADO15069 1562 aa19.81■□□□□ 0.76
TNPO2-202ENST00000425528 CLIP1P30622 1438 aa19.81■□□□□ 0.76
TNPO2-202ENST00000425528 FBLN2P98095 1184 aa19.81■□□□□ 0.76
TNPO2-202ENST00000425528 GOLGA3Q08378 1498 aa19.78■□□□□ 0.76
TNPO2-202ENST00000425528 CEP162Q5TB80 1403 aa19.75■□□□□ 0.75
TNPO2-202ENST00000425528 ARID3CA6NKF2 412 aa19.7■□□□□ 0.74
TNPO2-202ENST00000425528 ZNF777Q9ULD5 760 aaPredicted RBP19.66■□□□□ 0.74
TNPO2-202ENST00000425528 TNIKQ9UKE5 1360 aa19.66■□□□□ 0.74
TNPO2-202ENST00000425528 DDX10Q13206 875 aaKnown RBP19.65■□□□□ 0.74
TNPO2-202ENST00000425528 FKBP8Q14318 412 aa19.64■□□□□ 0.74
TNPO2-202ENST00000425528 WRNQ14191 1432 aaPredicted RBP eCLIP19.64■□□□□ 0.73
TNPO2-202ENST00000425528 ANP32AP39687 249 aaKnown RBP19.6■□□□□ 0.73
TNPO2-202ENST00000425528 CEP164Q9UPV0 1460 aa19.59■□□□□ 0.73
TNPO2-202ENST00000425528 BAZ1AQ9NRL2 1556 aaPredicted RBP19.59■□□□□ 0.73
TNPO2-202ENST00000425528 SCAF1Q9H7N4 1312 aaKnown RBP19.58■□□□□ 0.73
TNPO2-202ENST00000425528 HNRNPUQ00839 825 aaKnown RBP eCLIP19.58■□□□□ 0.72
TNPO2-202ENST00000425528 CANXP27824 592 aaKnown RBP19.57■□□□□ 0.72
TNPO2-202ENST00000425528 MTUS2Q5JR59 1369 aa19.57■□□□□ 0.72
TNPO2-202ENST00000425528 MIER1Q8N108 512 aa19.56■□□□□ 0.72
TNPO2-202ENST00000425528 BAZ1BQ9UIG0 1483 aaKnown RBP19.52■□□□□ 0.72
TNPO2-202ENST00000425528 ZBTB47Q9UFB7 747 aaPredicted RBP19.52■□□□□ 0.72
TNPO2-202ENST00000425528 NEFMP07197 916 aa19.47■□□□□ 0.71
TNPO2-202ENST00000425528 CHIC2Q9UKJ5 165 aa19.47■□□□□ 0.71
TNPO2-202ENST00000425528 KIF27Q86VH2 1401 aa19.47■□□□□ 0.71
TNPO2-202ENST00000425528 FAM9BQ8IZU0 186 aa19.46■□□□□ 0.71
TNPO2-202ENST00000425528 CECR2Q9BXF3 1484 aa19.41■□□□□ 0.7
TNPO2-202ENST00000425528 TMC1Q8TDI8 760 aa19.37■□□□□ 0.69
TNPO2-202ENST00000425528 EIF4G2P78344 907 aaKnown RBP eCLIP19.37■□□□□ 0.69
TNPO2-202ENST00000425528 MRS2Q9HD23 443 aa19.37■□□□□ 0.69
TNPO2-202ENST00000425528 TSPY4P0CV99 314 aa19.36■□□□□ 0.69
TNPO2-202ENST00000425528 TSPY10P0CW01 314 aa19.36■□□□□ 0.69
TNPO2-202ENST00000425528 NPM2Q86SE8 214 aaKnown RBP19.34■□□□□ 0.69
TNPO2-202ENST00000425528 CCDC136Q96JN2 1154 aa19.31■□□□□ 0.68
TNPO2-202ENST00000425528 RRP7BPQ9NSQ0 103 aa19.27■□□□□ 0.68
TNPO2-202ENST00000425528 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.26■□□□□ 0.67
TNPO2-202ENST00000425528 SOGA1O94964 1423 aa19.26■□□□□ 0.67
TNPO2-202ENST00000425528 MROH2BQ7Z745 1585 aa19.26■□□□□ 0.67
TNPO2-202ENST00000425528 HIRIP3Q9BW71 556 aaPredicted RBP19.25■□□□□ 0.67
TNPO2-202ENST00000425528 CHMP7Q8WUX9 453 aaPredicted RBP19.24■□□□□ 0.67
TNPO2-202ENST00000425528 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.22■□□□□ 0.678e-8■■□□□ 13.2
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms