RNA–Protein interactions for RNA: ENST00000424362.5

BRPF1-203, Transcript of bromodomain and PHD finger containing 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene BRPF1, Length 4,712 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1-203ENST00000424362 NISCHQ9Y2I1 1504 aa30.6■■■□□ 2.49
BRPF1-203ENST00000424362 DCAF8L2P0C7V8 631 aa29.83■■■□□ 2.37
BRPF1-203ENST00000424362 SUPT5HO00267 1087 aaKnown RBP29.19■■■□□ 2.26
BRPF1-203ENST00000424362 SHROOM4Q9ULL8 1493 aa28.77■■■□□ 2.2
BRPF1-203ENST00000424362 EHMT2Q96KQ7 1210 aa27.73■■■□□ 2.03
BRPF1-203ENST00000424362 PCGF6Q9BYE7 350 aa27.7■■■□□ 2.02
BRPF1-203ENST00000424362 FAM9AQ8IZU1 332 aaPredicted RBP27.36■■□□□ 1.97
BRPF1-203ENST00000424362 ZEB1P37275 1124 aaPredicted RBP27.16■■□□□ 1.94
BRPF1-203ENST00000424362 APLP2Q06481 763 aa27.1■■□□□ 1.93
BRPF1-203ENST00000424362 PELP1Q8IZL8 1130 aaKnown RBP27.09■■□□□ 1.93
BRPF1-203ENST00000424362 TRIM41Q8WV44 630 aa27.07■■□□□ 1.92
BRPF1-203ENST00000424362 TTBK1Q5TCY1 1321 aaPredicted RBP26.89■■□□□ 1.89
BRPF1-203ENST00000424362 HRCP23327 699 aa26.83■■□□□ 1.89
BRPF1-203ENST00000424362 CENPBP07199 599 aaPredicted RBP26.81■■□□□ 1.88
BRPF1-203ENST00000424362 CCER1Q8TC90 406 aaPredicted RBP26.8■■□□□ 1.88
BRPF1-203ENST00000424362 CHIC1Q5VXU3 224 aa26.71■■□□□ 1.87
BRPF1-203ENST00000424362 TRIM26Q12899 539 aaPredicted RBP26.67■■□□□ 1.86
BRPF1-203ENST00000424362 UBTFP17480 764 aaKnown RBP26.46■■□□□ 1.83
BRPF1-203ENST00000424362 LOC105371045A0A1W2PR82 267 aa26.45■■□□□ 1.82
BRPF1-203ENST00000424362 RANGAP1P46060 587 aaPredicted RBP26.38■■□□□ 1.81
BRPF1-203ENST00000424362 PPARGC1BQ86YN6 1023 aaKnown RBP26.33■■□□□ 1.81
BRPF1-203ENST00000424362 YTHDC1Q96MU7 727 aaKnown RBP26.13■■□□□ 1.77
BRPF1-203ENST00000424362 MYT1Q01538 1121 aa26.03■■□□□ 1.76
BRPF1-203ENST00000424362 ATP1B4Q9UN42 357 aaPredicted RBP25.95■■□□□ 1.74
BRPF1-203ENST00000424362 ERICH6Q7L0X2 663 aa25.86■■□□□ 1.73
BRPF1-203ENST00000424362 NEFLP07196 543 aa25.84■■□□□ 1.73
BRPF1-203ENST00000424362 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.73■■□□□ 1.71
BRPF1-203ENST00000424362 HNRNPUL2Q1KMD3 747 aaKnown RBP25.7■■□□□ 1.7
BRPF1-203ENST00000424362 DIEXFQ68CQ4 756 aaKnown RBP25.64■■□□□ 1.7
BRPF1-203ENST00000424362 ITGAEP38570 1179 aa25.52■■□□□ 1.68
BRPF1-203ENST00000424362 ZCCHC6Q5VYS8 1495 aaKnown RBP25.5■■□□□ 1.67
BRPF1-203ENST00000424362 ABCC9O60706 1549 aa25.49■■□□□ 1.67
BRPF1-203ENST00000424362 DCAF1Q9Y4B6 1507 aa25.27■■□□□ 1.64
BRPF1-203ENST00000424362 GTF3C3Q9Y5Q9 886 aa25.24■■□□□ 1.63
BRPF1-203ENST00000424362 CCDC180Q9P1Z9 1646 aa25.21■■□□□ 1.63
BRPF1-203ENST00000424362 PABPN1Q86U42 306 aaKnown RBP eCLIP25.14■■□□□ 1.61
BRPF1-203ENST00000424362 ZNF316A6NFI3 1004 aaPredicted RBP25.12■■□□□ 1.61
BRPF1-203ENST00000424362 ACIN1Q9UKV3 1341 aaKnown RBP25.09■■□□□ 1.61
BRPF1-203ENST00000424362 CSRNP3Q8WYN3 585 aa25■■□□□ 1.59
BRPF1-203ENST00000424362 POLR3GLQ9BT43 218 aa24.96■■□□□ 1.59
BRPF1-203ENST00000424362 FAM50AQ14320 339 aaKnown RBP24.94■■□□□ 1.58
BRPF1-203ENST00000424362 SCRIBQ14160 1630 aa24.92■■□□□ 1.58
BRPF1-203ENST00000424362 MYO15BQ96JP2 1530 aa24.88■■□□□ 1.57
BRPF1-203ENST00000424362 NEUROD1Q13562 356 aa24.83■■□□□ 1.57
BRPF1-203ENST00000424362 CNGB1Q14028 1251 aaPredicted RBP24.78■■□□□ 1.56
BRPF1-203ENST00000424362 DAXXQ9UER7 740 aaPredicted RBP24.72■■□□□ 1.55
BRPF1-203ENST00000424362 BCANQ96GW7 911 aa24.72■■□□□ 1.55
BRPF1-203ENST00000424362 ANP32CO43423 234 aa24.71■■□□□ 1.55
BRPF1-203ENST00000424362 TRIM52Q96A61 297 aa24.64■■□□□ 1.54
BRPF1-203ENST00000424362 SCAF1Q9H7N4 1312 aaKnown RBP24.55■■□□□ 1.52
BRPF1-203ENST00000424362 CLSPNQ9HAW4 1339 aa24.52■■□□□ 1.52
BRPF1-203ENST00000424362 RSF1Q96T23 1441 aaPredicted RBP24.52■■□□□ 1.52
BRPF1-203ENST00000424362 RTL5Q5HYW3 569 aaPredicted RBP24.51■■□□□ 1.51
BRPF1-203ENST00000424362 CDK11AQ9UQ88 783 aaPredicted RBP24.48■■□□□ 1.51
BRPF1-203ENST00000424362 MYT1LQ9UL68 1186 aa24.46■■□□□ 1.51
BRPF1-203ENST00000424362 P3H3Q8IVL6 736 aa24.39■■□□□ 1.5
BRPF1-203ENST00000424362 ZNF326Q5BKZ1 582 aaKnown RBP24.3■■□□□ 1.48
BRPF1-203ENST00000424362 MIER1Q8N108 512 aa24.29■■□□□ 1.48
BRPF1-203ENST00000424362 NACADO15069 1562 aa24.26■■□□□ 1.47
BRPF1-203ENST00000424362 RB1CC1Q8TDY2 1594 aa24.26■■□□□ 1.47
BRPF1-203ENST00000424362 FKBP8Q14318 412 aa24.25■■□□□ 1.47
BRPF1-203ENST00000424362 DDX10Q13206 875 aaKnown RBP24.23■■□□□ 1.47
BRPF1-203ENST00000424362 CLIP1P30622 1438 aa24.23■■□□□ 1.47
BRPF1-203ENST00000424362 EEA1Q15075 1411 aa24.22■■□□□ 1.47
BRPF1-203ENST00000424362 CEP162Q5TB80 1403 aa24.22■■□□□ 1.47
BRPF1-203ENST00000424362 TONSLQ96HA7 1378 aa24.2■■□□□ 1.46
BRPF1-203ENST00000424362 SLC4A1APQ9BWU0 796 aaKnown RBP24.14■■□□□ 1.45
BRPF1-203ENST00000424362 GOLGA3Q08378 1498 aa24.11■■□□□ 1.45
BRPF1-203ENST00000424362 HNRNPUQ00839 825 aaKnown RBP eCLIP24.08■■□□□ 1.45
BRPF1-203ENST00000424362 TNIKQ9UKE5 1360 aa24.08■■□□□ 1.45
BRPF1-203ENST00000424362 ARID3CA6NKF2 412 aa24.04■■□□□ 1.44
BRPF1-203ENST00000424362 ANP32AP39687 249 aaKnown RBP24■■□□□ 1.43
BRPF1-203ENST00000424362 FBLN2P98095 1184 aa23.98■■□□□ 1.43
BRPF1-203ENST00000424362 WRNQ14191 1432 aaPredicted RBP eCLIP23.98■■□□□ 1.43
BRPF1-203ENST00000424362 BAZ1AQ9NRL2 1556 aaPredicted RBP23.96■■□□□ 1.43
BRPF1-203ENST00000424362 CECR2Q9BXF3 1484 aa23.93■■□□□ 1.42
BRPF1-203ENST00000424362 FAM9BQ8IZU0 186 aa23.9■■□□□ 1.42
BRPF1-203ENST00000424362 ZNF777Q9ULD5 760 aaPredicted RBP23.89■■□□□ 1.42
BRPF1-203ENST00000424362 CEP164Q9UPV0 1460 aa23.88■■□□□ 1.41
BRPF1-203ENST00000424362 HIRIP3Q9BW71 556 aaPredicted RBP23.82■■□□□ 1.4
BRPF1-203ENST00000424362 CHIC2Q9UKJ5 165 aa23.82■■□□□ 1.4
BRPF1-203ENST00000424362 MTUS2Q5JR59 1369 aa23.82■■□□□ 1.4
BRPF1-203ENST00000424362 BAZ1BQ9UIG0 1483 aaKnown RBP23.81■■□□□ 1.4
BRPF1-203ENST00000424362 NPM2Q86SE8 214 aaKnown RBP23.77■■□□□ 1.4
BRPF1-203ENST00000424362 MRS2Q9HD23 443 aa23.76■■□□□ 1.39
BRPF1-203ENST00000424362 CANXP27824 592 aaKnown RBP23.76■■□□□ 1.39
BRPF1-203ENST00000424362 CCDC136Q96JN2 1154 aa23.71■■□□□ 1.39
BRPF1-203ENST00000424362 TMC1Q8TDI8 760 aa23.7■■□□□ 1.38
BRPF1-203ENST00000424362 MROH2BQ7Z745 1585 aa23.7■■□□□ 1.38
BRPF1-203ENST00000424362 EIF4G2P78344 907 aaKnown RBP eCLIP23.69■■□□□ 1.38
BRPF1-203ENST00000424362 KIF27Q86VH2 1401 aa23.69■■□□□ 1.38
BRPF1-203ENST00000424362 SOGA1O94964 1423 aa23.68■■□□□ 1.38
BRPF1-203ENST00000424362 IRX6P78412 446 aaPredicted RBP23.66■■□□□ 1.38
BRPF1-203ENST00000424362 ZBTB47Q9UFB7 747 aaPredicted RBP23.59■■□□□ 1.37
BRPF1-203ENST00000424362 SALL2Q9Y467 1007 aaPredicted RBP23.59■■□□□ 1.37
BRPF1-203ENST00000424362 RRP7BPQ9NSQ0 103 aa23.58■■□□□ 1.37
BRPF1-203ENST00000424362 SUPT16HQ9Y5B9 1047 aaKnown RBP23.56■■□□□ 1.36
BRPF1-203ENST00000424362 CCNB3Q8WWL7 1395 aa23.54■■□□□ 1.36
BRPF1-203ENST00000424362 CCDC88BA6NC98 1476 aa23.54■■□□□ 1.36
BRPF1-203ENST00000424362 ANP32EQ9BTT0 268 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms