RNA–Protein interactions for RNA: ENST00000431127.1

CTDSP1-203, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-203ENST00000431127 NISCHQ9Y2I1 1504 aa42.07■■■■■ 4.33
CTDSP1-203ENST00000431127 CCDC180Q9P1Z9 1646 aa37.37■■■■□ 3.57
CTDSP1-203ENST00000431127 ABCC9O60706 1549 aa36.78■■■■□ 3.48
CTDSP1-203ENST00000431127 RB1CC1Q8TDY2 1594 aa35.21■■■■□ 3.23
CTDSP1-203ENST00000431127 DCAF8L2P0C7V8 631 aa35.2■■■■□ 3.23
CTDSP1-203ENST00000431127 NACADO15069 1562 aa35.19■■■■□ 3.22
CTDSP1-203ENST00000431127 ZCCHC6Q5VYS8 1495 aaKnown RBP35.03■■■■□ 3.2
CTDSP1-203ENST00000431127 MYO15BQ96JP2 1530 aa35.01■■■■□ 3.19
CTDSP1-203ENST00000431127 DCAF1Q9Y4B6 1507 aa34.84■■■■□ 3.17
CTDSP1-203ENST00000431127 DNAJC5BQ9UF47 199 aa34.61■■■■□ 3.13
CTDSP1-203ENST00000431127 PABPN1Q86U42 306 aaKnown RBP eCLIP34.35■■■■□ 3.09
CTDSP1-203ENST00000431127 UNC13AQ9UPW8 1703 aa34.29■■■■□ 3.08
CTDSP1-203ENST00000431127 BICRAQ9NZM4 1560 aa34.09■■■■□ 3.05
CTDSP1-203ENST00000431127 SCRIBQ14160 1630 aa34.08■■■■□ 3.05
CTDSP1-203ENST00000431127 SHROOM4Q9ULL8 1493 aa33.84■■■■□ 3.01
CTDSP1-203ENST00000431127 EIF4G1Q04637 1599 aaKnown RBP33.22■■■□□ 2.91
CTDSP1-203ENST00000431127 CC2D2AQ9P2K1 1620 aa33.19■■■□□ 2.9
CTDSP1-203ENST00000431127 CECR2Q9BXF3 1484 aa33.14■■■□□ 2.9
CTDSP1-203ENST00000431127 BAZ1AQ9NRL2 1556 aaPredicted RBP32.62■■■□□ 2.81
CTDSP1-203ENST00000431127 SMARCA4P51532 1647 aa32.61■■■□□ 2.81
CTDSP1-203ENST00000431127 NCAPD3P42695 1498 aa32.48■■■□□ 2.79
CTDSP1-203ENST00000431127 ATAD2BQ9ULI0 1458 aa32.48■■■□□ 2.79
CTDSP1-203ENST00000431127 SMARCA2P51531 1590 aa32.45■■■□□ 2.79
CTDSP1-203ENST00000431127 MROH2BQ7Z745 1585 aa32.39■■■□□ 2.78
CTDSP1-203ENST00000431127 PEG3Q9GZU2 1588 aa32.32■■■□□ 2.77
CTDSP1-203ENST00000431127 HMGXB3Q12766 1538 aa32.3■■■□□ 2.76
CTDSP1-203ENST00000431127 BAZ1BQ9UIG0 1483 aaKnown RBP32.22■■■□□ 2.75
CTDSP1-203ENST00000431127 RSF1Q96T23 1441 aaPredicted RBP32.07■■■□□ 2.72
CTDSP1-203ENST00000431127 WIZO95785 1651 aa32.01■■■□□ 2.71
CTDSP1-203ENST00000431127 DNAJC5Q9H3Z4 198 aa31.76■■■□□ 2.67
CTDSP1-203ENST00000431127 ERCC6Q03468 1493 aa31.73■■■□□ 2.67
CTDSP1-203ENST00000431127 TOP2AP11388 1531 aaKnown RBP31.73■■■□□ 2.67
CTDSP1-203ENST00000431127 CUX2O14529 1486 aa31.67■■■□□ 2.66
CTDSP1-203ENST00000431127 NESP48681 1621 aa31.63■■■□□ 2.65
CTDSP1-203ENST00000431127 LAMC3Q9Y6N6 1575 aa31.6■■■□□ 2.65
CTDSP1-203ENST00000431127 CADPSQ9ULU8 1353 aa31.55■■■□□ 2.64
CTDSP1-203ENST00000431127 PDS5BQ9NTI5 1447 aa31.44■■■□□ 2.62
CTDSP1-203ENST00000431127 CCDC88BA6NC98 1476 aa31.36■■■□□ 2.61
CTDSP1-203ENST00000431127 CFTRP13569 1480 aa31.33■■■□□ 2.61
CTDSP1-203ENST00000431127 SUPT5HO00267 1087 aaKnown RBP31.27■■■□□ 2.6
CTDSP1-203ENST00000431127 KIF21AQ7Z4S6 1674 aa31.22■■■□□ 2.59
CTDSP1-203ENST00000431127 THOC2Q8NI27 1593 aaKnown RBP31.18■■■□□ 2.58
CTDSP1-203ENST00000431127 FANCD2Q9BXW9 1451 aa31.16■■■□□ 2.58
CTDSP1-203ENST00000431127 CEP164Q9UPV0 1460 aa31.13■■■□□ 2.57
CTDSP1-203ENST00000431127 MRC2Q9UBG0 1479 aa31.08■■■□□ 2.57
CTDSP1-203ENST00000431127 PRDM2Q13029 1718 aa31■■■□□ 2.55
CTDSP1-203ENST00000431127 WDR62O43379 1518 aa30.95■■■□□ 2.55
CTDSP1-203ENST00000431127 URB2Q14146 1524 aaKnown RBP30.81■■■□□ 2.52
CTDSP1-203ENST00000431127 ABCC8Q09428 1581 aa30.71■■■□□ 2.51
CTDSP1-203ENST00000431127 TOPBP1Q92547 1522 aa30.64■■■□□ 2.5
CTDSP1-203ENST00000431127 DNMBPQ6XZF7 1577 aa30.6■■■□□ 2.49
CTDSP1-203ENST00000431127 IFT140Q96RY7 1462 aa30.49■■■□□ 2.47
CTDSP1-203ENST00000431127 CUX1P39880 1505 aa30.39■■■□□ 2.46
CTDSP1-203ENST00000431127 OSCARQ8IYS5 282 aa30.39■■■□□ 2.46
CTDSP1-203ENST00000431127 POLA1P09884 1462 aaPredicted RBP30.38■■■□□ 2.45
CTDSP1-203ENST00000431127 TRIM41Q8WV44 630 aa30.33■■■□□ 2.45
CTDSP1-203ENST00000431127 FGD5Q6ZNL6 1462 aa30.31■■■□□ 2.44
CTDSP1-203ENST00000431127 SOGA1O94964 1423 aa30.3■■■□□ 2.44
CTDSP1-203ENST00000431127 ZNF608Q9ULD9 1512 aaPredicted RBP30.29■■■□□ 2.44
CTDSP1-203ENST00000431127 TARBP1Q13395 1621 aaKnown RBP30.28■■■□□ 2.44
CTDSP1-203ENST00000431127 WRNQ14191 1432 aaPredicted RBP eCLIP30.25■■■□□ 2.43
CTDSP1-203ENST00000431127 RAD54L2Q9Y4B4 1467 aa30.24■■■□□ 2.43
CTDSP1-203ENST00000431127 EIF4G3O43432 1585 aaKnown RBP30.15■■■□□ 2.42
CTDSP1-203ENST00000431127 TOP2BQ02880 1626 aa30.14■■■□□ 2.42
CTDSP1-203ENST00000431127 AQRO60306 1485 aaKnown RBP eCLIP30.14■■■□□ 2.426e-12■■■■■ 82.1
CTDSP1-203ENST00000431127 BIVM-ERCC5R4GMW8 1640 aa30.11■■■□□ 2.41
CTDSP1-203ENST00000431127 TDRD9Q8NDG6 1382 aaKnown RBP30.11■■■□□ 2.41
CTDSP1-203ENST00000431127 SYNJ1O43426 1573 aa30.1■■■□□ 2.41
CTDSP1-203ENST00000431127 WDR97A6NE52 1622 aa30.1■■■□□ 2.41
CTDSP1-203ENST00000431127 ABCA10Q8WWZ4 1543 aa30.03■■■□□ 2.4
CTDSP1-203ENST00000431127 GRIN2BQ13224 1484 aa29.94■■■□□ 2.38
CTDSP1-203ENST00000431127 GAPVD1Q14C86 1478 aa29.93■■■□□ 2.38
CTDSP1-203ENST00000431127 SNAPC4Q5SXM2 1469 aa29.87■■■□□ 2.37
CTDSP1-203ENST00000431127 MAGI1Q96QZ7 1491 aaPredicted RBP29.87■■■□□ 2.37
CTDSP1-203ENST00000431127 ABCA5Q8WWZ7 1642 aa29.86■■■□□ 2.37
CTDSP1-203ENST00000431127 FBLN2P98095 1184 aa29.83■■■□□ 2.37
CTDSP1-203ENST00000431127 RIMBP3CA6NJZ7 1639 aa29.79■■■□□ 2.36
CTDSP1-203ENST00000431127 RIMBP3BA6NNM3 1639 aa29.79■■■□□ 2.36
CTDSP1-203ENST00000431127 RIMBP3Q9UFD9 1639 aa29.79■■■□□ 2.36
CTDSP1-203ENST00000431127 CHMP7Q8WUX9 453 aaPredicted RBP29.78■■■□□ 2.36
CTDSP1-203ENST00000431127 PBRM1Q86U86 1689 aa29.78■■■□□ 2.36
CTDSP1-203ENST00000431127 SYNJ2O15056 1496 aa29.74■■■□□ 2.35
CTDSP1-203ENST00000431127 CHD1O14646 1710 aa29.74■■■□□ 2.35
CTDSP1-203ENST00000431127 ARHGEF11O15085 1522 aa29.73■■■□□ 2.35
CTDSP1-203ENST00000431127 ERICH3Q5RHP9 1530 aa29.68■■■□□ 2.34
CTDSP1-203ENST00000431127 CYB5RLQ6IPT4 315 aa29.66■■■□□ 2.34
CTDSP1-203ENST00000431127 KIF27Q86VH2 1401 aa29.64■■■□□ 2.34
CTDSP1-203ENST00000431127 FHAD1B1AJZ9 1412 aa29.61■■■□□ 2.33
CTDSP1-203ENST00000431127 ADAMTS12P58397 1594 aa29.58■■■□□ 2.33
CTDSP1-203ENST00000431127 GRIN2AQ12879 1464 aa29.53■■■□□ 2.32
CTDSP1-203ENST00000431127 IGF1RP08069 1367 aa29.51■■■□□ 2.31
CTDSP1-203ENST00000431127 CLASP1Q7Z460 1538 aa29.47■■■□□ 2.31
CTDSP1-203ENST00000431127 ARAP1Q96P48 1450 aa29.44■■■□□ 2.3
CTDSP1-203ENST00000431127 NUP160Q12769 1436 aa29.41■■■□□ 2.3
CTDSP1-203ENST00000431127 CUL7Q14999 1698 aa29.39■■■□□ 2.3
CTDSP1-203ENST00000431127 CEP170Q5SW79 1584 aa29.35■■■□□ 2.29
CTDSP1-203ENST00000431127 CARMIL1Q5VZK9 1371 aa29.34■■■□□ 2.29
CTDSP1-203ENST00000431127 TRHP20396 242 aaPredicted RBP29.3■■■□□ 2.28
CTDSP1-203ENST00000431127 RUSC2Q8N2Y8 1516 aa29.28■■■□□ 2.28
CTDSP1-203ENST00000431127 CHIC1Q5VXU3 224 aa29.18■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms