RNA–Protein interactions for RNA: ENST00000437733.5

TRAPPC12-208, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 518 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-208ENST00000437733 AEBP2Q6ZN18 517 aaPredicted RBP20.57■□□□□ 0.88
TRAPPC12-208ENST00000437733 CHIC1Q5VXU3 224 aa19.59■□□□□ 0.73
TRAPPC12-208ENST00000437733 SENP3Q9H4L4 574 aaPredicted RBP17.51■□□□□ 0.39
TRAPPC12-208ENST00000437733 PHF23Q9BUL5 403 aaPredicted RBP17.27■□□□□ 0.36
TRAPPC12-208ENST00000437733 FOXD1Q16676 465 aa16.31■□□□□ 0.2
TRAPPC12-208ENST00000437733 PLPPR3Q6T4P5 718 aa15.65■□□□□ 0.1
TRAPPC12-208ENST00000437733 PPP6R1Q9UPN7 881 aa15.31■□□□□ 0.04
TRAPPC12-208ENST00000437733 ADRA2BP18089 450 aa15.24■□□□□ 0.03
TRAPPC12-208ENST00000437733 MSH5O43196 834 aa15.23■□□□□ 0.03
TRAPPC12-208ENST00000437733 PIAS4Q8N2W9 510 aaPredicted RBP15.23■□□□□ 0.03
TRAPPC12-208ENST00000437733 POTEDQ86YR6 584 aa14.75□□□□□ -0.05
TRAPPC12-208ENST00000437733 NISCHQ9Y2I1 1504 aa14.2□□□□□ -0.14
TRAPPC12-208ENST00000437733 MAPK8IP2Q13387 824 aaPredicted RBP13.97□□□□□ -0.17
TRAPPC12-208ENST00000437733 SCAF1Q9H7N4 1312 aaKnown RBP13.91□□□□□ -0.18
TRAPPC12-208ENST00000437733 DMRT2Q9Y5R5 561 aa13.91□□□□□ -0.18
TRAPPC12-208ENST00000437733 PPP4R3CPQ6ZMV5 832 aa13.72□□□□□ -0.21
TRAPPC12-208ENST00000437733 CNKSR2Q8WXI2 1034 aa13.45□□□□□ -0.26
TRAPPC12-208ENST00000437733 HOXD11P31277 338 aaPredicted RBP13.43□□□□□ -0.26
TRAPPC12-208ENST00000437733 RNF216Q9NWF9 866 aaPredicted RBP13.33□□□□□ -0.28
TRAPPC12-208ENST00000437733 DCAF8L1A6NGE4 600 aa13.23□□□□□ -0.29
TRAPPC12-208ENST00000437733 NCBP3Q53F19 620 aaKnown RBP13.2□□□□□ -0.3
TRAPPC12-208ENST00000437733 NPM3O75607 178 aaKnown RBP13.04□□□□□ -0.32
TRAPPC12-208ENST00000437733 RNF39Q9H2S5 420 aa13.03□□□□□ -0.32
TRAPPC12-208ENST00000437733 CACNB1Q02641 598 aaPredicted RBP12.99□□□□□ -0.33
TRAPPC12-208ENST00000437733 DNAJC5BQ9UF47 199 aa12.98□□□□□ -0.33
TRAPPC12-208ENST00000437733 KCNA4P22459 653 aa12.85□□□□□ -0.35
TRAPPC12-208ENST00000437733 C1QBPQ07021 282 aaKnown RBP12.82□□□□□ -0.36
TRAPPC12-208ENST00000437733 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.73□□□□□ -0.371e-7■□□□□ 8.7
TRAPPC12-208ENST00000437733 U3KPZ7 1027 aaPredicted RBP12.52□□□□□ -0.41
TRAPPC12-208ENST00000437733 SLC4A2P04920 1241 aa12.46□□□□□ -0.41
TRAPPC12-208ENST00000437733 CCDC180Q9P1Z9 1646 aa12.43□□□□□ -0.42
TRAPPC12-208ENST00000437733 SPINK5Q9NQ38 1064 aaPredicted RBP12.3□□□□□ -0.44
TRAPPC12-208ENST00000437733 CAPN15O75808 1086 aa12.24□□□□□ -0.45
TRAPPC12-208ENST00000437733 DSG3P32926 999 aa12.2□□□□□ -0.46
TRAPPC12-208ENST00000437733 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.15□□□□□ -0.46
TRAPPC12-208ENST00000437733 HNRNPUL2Q1KMD3 747 aaKnown RBP12.15□□□□□ -0.46
TRAPPC12-208ENST00000437733 APLP2Q06481 763 aa12.13□□□□□ -0.47
TRAPPC12-208ENST00000437733 SLC4A1APQ9BWU0 796 aaKnown RBP12.12□□□□□ -0.47
TRAPPC12-208ENST00000437733 SAMD1Q6SPF0 538 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC12-208ENST00000437733 ZNF219Q9P2Y4 722 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC12-208ENST00000437733 MYCNP04198 464 aaPredicted RBP12.05□□□□□ -0.48
TRAPPC12-208ENST00000437733 TRHP20396 242 aaPredicted RBP12.05□□□□□ -0.48
TRAPPC12-208ENST00000437733 ABCB7O75027 752 aa11.97□□□□□ -0.49
TRAPPC12-208ENST00000437733 FOXD4L1Q9NU39 408 aa11.97□□□□□ -0.49
TRAPPC12-208ENST00000437733 ZCCHC6Q5VYS8 1495 aaKnown RBP11.92□□□□□ -0.5
TRAPPC12-208ENST00000437733 ZBTB22O15209 634 aa11.85□□□□□ -0.51
TRAPPC12-208ENST00000437733 ATF5Q9Y2D1 282 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC12-208ENST00000437733 POLA2Q14181 598 aa11.76□□□□□ -0.53
TRAPPC12-208ENST00000437733 EHMT2Q96KQ7 1210 aa11.76□□□□□ -0.53
TRAPPC12-208ENST00000437733 DCAF1Q9Y4B6 1507 aa11.75□□□□□ -0.53
TRAPPC12-208ENST00000437733 DCAF8L2P0C7V8 631 aa11.71□□□□□ -0.53
TRAPPC12-208ENST00000437733 SLC24A1O60721 1099 aa11.69□□□□□ -0.54
TRAPPC12-208ENST00000437733 ABCC9O60706 1549 aa11.68□□□□□ -0.54
TRAPPC12-208ENST00000437733 RBM42Q9BTD8 480 aaKnown RBP11.62□□□□□ -0.55
TRAPPC12-208ENST00000437733 ATXN8OSP0DMR3 200 aa11.61□□□□□ -0.55
TRAPPC12-208ENST00000437733 MYO15BQ96JP2 1530 aa11.6□□□□□ -0.55
TRAPPC12-208ENST00000437733 SHROOM4Q9ULL8 1493 aa11.58□□□□□ -0.56
TRAPPC12-208ENST00000437733 POTEHQ6S545 545 aa11.57□□□□□ -0.56
TRAPPC12-208ENST00000437733 ZBTB12Q9Y330 459 aaPredicted RBP11.56□□□□□ -0.56
TRAPPC12-208ENST00000437733 NACADO15069 1562 aa11.54□□□□□ -0.56
TRAPPC12-208ENST00000437733 RB1CC1Q8TDY2 1594 aa11.45□□□□□ -0.58
TRAPPC12-208ENST00000437733 OSCARQ8IYS5 282 aa11.42□□□□□ -0.58
TRAPPC12-208ENST00000437733 SCRIBQ14160 1630 aa11.41□□□□□ -0.58
TRAPPC12-208ENST00000437733 AKT1S1Q96B36 256 aa11.39□□□□□ -0.59
TRAPPC12-208ENST00000437733 CHRDL2Q6WN34 429 aa11.35□□□□□ -0.59
TRAPPC12-208ENST00000437733 CSRNP3Q8WYN3 585 aa11.33□□□□□ -0.6
TRAPPC12-208ENST00000437733 FBLN2P98095 1184 aa11.27□□□□□ -0.61
TRAPPC12-208ENST00000437733 MKRN4PQ13434 485 aaPredicted RBP11.27□□□□□ -0.61
TRAPPC12-208ENST00000437733 REM2Q8IYK8 340 aaPredicted RBP11.27□□□□□ -0.61
TRAPPC12-208ENST00000437733 UNC13AQ9UPW8 1703 aa11.25□□□□□ -0.61
TRAPPC12-208ENST00000437733 SPDYE2BA6NHP3 402 aa11.21□□□□□ -0.61
TRAPPC12-208ENST00000437733 SPDYE6P0CI01 402 aa11.21□□□□□ -0.61
TRAPPC12-208ENST00000437733 SPDYE2Q495Y8 402 aa11.21□□□□□ -0.61
TRAPPC12-208ENST00000437733 PITPNM1O00562 1244 aa11.16□□□□□ -0.62
TRAPPC12-208ENST00000437733 SUPT5HO00267 1087 aaKnown RBP11.15□□□□□ -0.62
TRAPPC12-208ENST00000437733 PIP4P2Q8N4L2 257 aa11.11□□□□□ -0.63
TRAPPC12-208ENST00000437733 SSUH2Q9Y2M2 353 aa11.11□□□□□ -0.63
TRAPPC12-208ENST00000437733 BICRAQ9NZM4 1560 aa11.07□□□□□ -0.64
TRAPPC12-208ENST00000437733 FXR2P51116 673 aaKnown RBP eCLIP11.06□□□□□ -0.64
TRAPPC12-208ENST00000437733 ZNF692Q9BU19 519 aaPredicted RBP11.04□□□□□ -0.64
TRAPPC12-208ENST00000437733 RSF1Q96T23 1441 aaPredicted RBP11.01□□□□□ -0.65
TRAPPC12-208ENST00000437733 CECR2Q9BXF3 1484 aa11□□□□□ -0.65
TRAPPC12-208ENST00000437733 PABPN1Q86U42 306 aaKnown RBP eCLIP11□□□□□ -0.65
TRAPPC12-208ENST00000437733 AMER1Q5JTC6 1135 aaPredicted RBP10.99□□□□□ -0.65
TRAPPC12-208ENST00000437733 SPDYE1Q8NFV5 336 aaPredicted RBP10.99□□□□□ -0.65
TRAPPC12-208ENST00000437733 RTN4Q9NQC3 1192 aaKnown RBP10.98□□□□□ -0.65
TRAPPC12-208ENST00000437733 BAZ1AQ9NRL2 1556 aaPredicted RBP10.98□□□□□ -0.65
TRAPPC12-208ENST00000437733 MROH2BQ7Z745 1585 aa10.96□□□□□ -0.65
TRAPPC12-208ENST00000437733 SMARCA4P51532 1647 aa10.93□□□□□ -0.66
TRAPPC12-208ENST00000437733 CLEC11AQ9Y240 323 aa10.91□□□□□ -0.66
TRAPPC12-208ENST00000437733 WIZO95785 1651 aa10.9□□□□□ -0.66
TRAPPC12-208ENST00000437733 SP7Q8TDD2 431 aaPredicted RBP10.88□□□□□ -0.67
TRAPPC12-208ENST00000437733 PRKAR2AP13861 404 aaKnown RBP10.84□□□□□ -0.67
TRAPPC12-208ENST00000437733 HAX1O00165 279 aa10.83□□□□□ -0.68
TRAPPC12-208ENST00000437733 TOP2AP11388 1531 aaKnown RBP10.79□□□□□ -0.68
TRAPPC12-208ENST00000437733 PEG3Q9GZU2 1588 aa10.77□□□□□ -0.68
TRAPPC12-208ENST00000437733 SMARCA2P51531 1590 aa10.75□□□□□ -0.69
TRAPPC12-208ENST00000437733 PRR29P0C7W0 189 aa10.75□□□□□ -0.69
TRAPPC12-208ENST00000437733 EVX2Q03828 476 aa10.75□□□□□ -0.69
TRAPPC12-208ENST00000437733 EIF4G1Q04637 1599 aaKnown RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms