RNA–Protein interactions for RNA: ENST00000622107.4

LTBP4-237, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 4

Gene LTBP4, Length 590 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-237ENST00000622107 NISCHQ9Y2I1 1504 aa36.6■■■■□ 3.45
LTBP4-237ENST00000622107 CCDC180Q9P1Z9 1646 aa32.72■■■□□ 2.83
LTBP4-237ENST00000622107 ABCC9O60706 1549 aa32.33■■■□□ 2.77
LTBP4-237ENST00000622107 RB1CC1Q8TDY2 1594 aa30.96■■■□□ 2.55
LTBP4-237ENST00000622107 NACADO15069 1562 aa30.84■■■□□ 2.53
LTBP4-237ENST00000622107 DCAF8L2P0C7V8 631 aa30.67■■■□□ 2.5
LTBP4-237ENST00000622107 MYO15BQ96JP2 1530 aa30.55■■■□□ 2.48
LTBP4-237ENST00000622107 ZCCHC6Q5VYS8 1495 aaKnown RBP30.44■■■□□ 2.46
LTBP4-237ENST00000622107 DCAF1Q9Y4B6 1507 aa30.29■■■□□ 2.44
LTBP4-237ENST00000622107 UNC13AQ9UPW8 1703 aa30.18■■■□□ 2.42
LTBP4-237ENST00000622107 PABPN1Q86U42 306 aaKnown RBP eCLIP30.12■■■□□ 2.41
LTBP4-237ENST00000622107 BICRAQ9NZM4 1560 aa30.01■■■□□ 2.39
LTBP4-237ENST00000622107 DNAJC5BQ9UF47 199 aa29.92■■■□□ 2.38
LTBP4-237ENST00000622107 SCRIBQ14160 1630 aa29.83■■■□□ 2.37
LTBP4-237ENST00000622107 SHROOM4Q9ULL8 1493 aa29.75■■■□□ 2.35
LTBP4-237ENST00000622107 EIF4G1Q04637 1599 aaKnown RBP29.27■■■□□ 2.28
LTBP4-237ENST00000622107 CC2D2AQ9P2K1 1620 aa29.22■■■□□ 2.27
LTBP4-237ENST00000622107 CECR2Q9BXF3 1484 aa29.1■■■□□ 2.25
LTBP4-237ENST00000622107 SMARCA4P51532 1647 aa28.49■■■□□ 2.15
LTBP4-237ENST00000622107 NCAPD3P42695 1498 aa28.45■■■□□ 2.14
LTBP4-237ENST00000622107 BAZ1AQ9NRL2 1556 aaPredicted RBP28.41■■■□□ 2.14
LTBP4-237ENST00000622107 ATAD2BQ9ULI0 1458 aa28.41■■■□□ 2.14
LTBP4-237ENST00000622107 SMARCA2P51531 1590 aa28.39■■■□□ 2.14
LTBP4-237ENST00000622107 HMGXB3Q12766 1538 aa28.31■■■□□ 2.12
LTBP4-237ENST00000622107 PEG3Q9GZU2 1588 aa28.22■■■□□ 2.11
LTBP4-237ENST00000622107 MROH2BQ7Z745 1585 aa28.2■■■□□ 2.1
LTBP4-237ENST00000622107 BAZ1BQ9UIG0 1483 aaKnown RBP28.19■■■□□ 2.1
LTBP4-237ENST00000622107 ERCC6Q03468 1493 aa27.94■■■□□ 2.06
LTBP4-237ENST00000622107 NESP48681 1621 aa27.86■■■□□ 2.05
LTBP4-237ENST00000622107 WIZO95785 1651 aa27.85■■■□□ 2.05
LTBP4-237ENST00000622107 LAMC3Q9Y6N6 1575 aa27.77■■■□□ 2.04
LTBP4-237ENST00000622107 CUX2O14529 1486 aa27.76■■■□□ 2.04
LTBP4-237ENST00000622107 RSF1Q96T23 1441 aaPredicted RBP27.75■■■□□ 2.03
LTBP4-237ENST00000622107 CADPSQ9ULU8 1353 aa27.6■■■□□ 2.01
LTBP4-237ENST00000622107 PDS5BQ9NTI5 1447 aa27.6■■■□□ 2.01
LTBP4-237ENST00000622107 TOP2AP11388 1531 aaKnown RBP27.6■■■□□ 2.01
LTBP4-237ENST00000622107 THOC2Q8NI27 1593 aaKnown RBP27.55■■■□□ 2
LTBP4-237ENST00000622107 KIF21AQ7Z4S6 1674 aa27.52■■■□□ 2
LTBP4-237ENST00000622107 CFTRP13569 1480 aa27.38■■□□□ 1.97
LTBP4-237ENST00000622107 MRC2Q9UBG0 1479 aa27.35■■□□□ 1.97
LTBP4-237ENST00000622107 CEP164Q9UPV0 1460 aa27.32■■□□□ 1.96
LTBP4-237ENST00000622107 FANCD2Q9BXW9 1451 aa27.31■■□□□ 1.96
LTBP4-237ENST00000622107 WDR62O43379 1518 aa27.27■■□□□ 1.96
LTBP4-237ENST00000622107 DNAJC5Q9H3Z4 198 aa27.25■■□□□ 1.95
LTBP4-237ENST00000622107 CCDC88BA6NC98 1476 aa27.23■■□□□ 1.95
LTBP4-237ENST00000622107 PRDM2Q13029 1718 aa27.1■■□□□ 1.93
LTBP4-237ENST00000622107 URB2Q14146 1524 aaKnown RBP27.05■■□□□ 1.92
LTBP4-237ENST00000622107 TOPBP1Q92547 1522 aa26.82■■□□□ 1.88
LTBP4-237ENST00000622107 ABCC8Q09428 1581 aa26.8■■□□□ 1.88
LTBP4-237ENST00000622107 DNMBPQ6XZF7 1577 aa26.77■■□□□ 1.88
LTBP4-237ENST00000622107 IFT140Q96RY7 1462 aa26.76■■□□□ 1.87
LTBP4-237ENST00000622107 SUPT5HO00267 1087 aaKnown RBP26.75■■□□□ 1.87
LTBP4-237ENST00000622107 ZNF608Q9ULD9 1512 aaPredicted RBP26.64■■□□□ 1.85
LTBP4-237ENST00000622107 POLA1P09884 1462 aaPredicted RBP26.57■■□□□ 1.84
LTBP4-237ENST00000622107 EIF4G3O43432 1585 aaKnown RBP26.54■■□□□ 1.84
LTBP4-237ENST00000622107 TARBP1Q13395 1621 aaKnown RBP26.54■■□□□ 1.84
LTBP4-237ENST00000622107 OSCARQ8IYS5 282 aa26.49■■□□□ 1.83
LTBP4-237ENST00000622107 CUX1P39880 1505 aa26.49■■□□□ 1.83
LTBP4-237ENST00000622107 FGD5Q6ZNL6 1462 aa26.46■■□□□ 1.83
LTBP4-237ENST00000622107 RAD54L2Q9Y4B4 1467 aa26.44■■□□□ 1.82
LTBP4-237ENST00000622107 SOGA1O94964 1423 aa26.43■■□□□ 1.82
LTBP4-237ENST00000622107 AQRO60306 1485 aaKnown RBP eCLIP26.42■■□□□ 1.821e-6■■□□□ 14.2
LTBP4-237ENST00000622107 WDR97A6NE52 1622 aa26.36■■□□□ 1.81
LTBP4-237ENST00000622107 TDRD9Q8NDG6 1382 aaKnown RBP26.33■■□□□ 1.81
LTBP4-237ENST00000622107 CHD1O14646 1710 aa26.24■■□□□ 1.79
LTBP4-237ENST00000622107 TRIM41Q8WV44 630 aa26.23■■□□□ 1.79
LTBP4-237ENST00000622107 SNAPC4Q5SXM2 1469 aa26.23■■□□□ 1.79
LTBP4-237ENST00000622107 GRIN2BQ13224 1484 aa26.2■■□□□ 1.78
LTBP4-237ENST00000622107 WRNQ14191 1432 aaPredicted RBP eCLIP26.2■■□□□ 1.78
LTBP4-237ENST00000622107 ABCA10Q8WWZ4 1543 aa26.19■■□□□ 1.78
LTBP4-237ENST00000622107 MAGI1Q96QZ7 1491 aaPredicted RBP26.18■■□□□ 1.78
LTBP4-237ENST00000622107 FBLN2P98095 1184 aa26.18■■□□□ 1.78
LTBP4-237ENST00000622107 TOP2BQ02880 1626 aa26.17■■□□□ 1.78
LTBP4-237ENST00000622107 BIVM-ERCC5R4GMW8 1640 aa26.16■■□□□ 1.78
LTBP4-237ENST00000622107 GAPVD1Q14C86 1478 aa26.14■■□□□ 1.78
LTBP4-237ENST00000622107 SYNJ1O43426 1573 aa26.14■■□□□ 1.78
LTBP4-237ENST00000622107 RIMBP3CA6NJZ7 1639 aa26.13■■□□□ 1.77
LTBP4-237ENST00000622107 RIMBP3BA6NNM3 1639 aa26.13■■□□□ 1.77
LTBP4-237ENST00000622107 RIMBP3Q9UFD9 1639 aa26.13■■□□□ 1.77
LTBP4-237ENST00000622107 ABCA5Q8WWZ7 1642 aa26.12■■□□□ 1.77
LTBP4-237ENST00000622107 ARHGEF11O15085 1522 aa26.11■■□□□ 1.77
LTBP4-237ENST00000622107 PBRM1Q86U86 1689 aa26.09■■□□□ 1.77
LTBP4-237ENST00000622107 SYNJ2O15056 1496 aa26.08■■□□□ 1.77
LTBP4-237ENST00000622107 CHMP7Q8WUX9 453 aaPredicted RBP26.06■■□□□ 1.76
LTBP4-237ENST00000622107 CLASP1Q7Z460 1538 aa25.98■■□□□ 1.75
LTBP4-237ENST00000622107 ADAMTS12P58397 1594 aa25.91■■□□□ 1.74
LTBP4-237ENST00000622107 ARAP1Q96P48 1450 aa25.88■■□□□ 1.73
LTBP4-237ENST00000622107 ERICH3Q5RHP9 1530 aa25.87■■□□□ 1.73
LTBP4-237ENST00000622107 GRIN2AQ12879 1464 aa25.86■■□□□ 1.73
LTBP4-237ENST00000622107 FHAD1B1AJZ9 1412 aa25.84■■□□□ 1.73
LTBP4-237ENST00000622107 CYB5RLQ6IPT4 315 aa25.83■■□□□ 1.73
LTBP4-237ENST00000622107 NUP160Q12769 1436 aa25.76■■□□□ 1.71
LTBP4-237ENST00000622107 CEP170Q5SW79 1584 aa25.73■■□□□ 1.71
LTBP4-237ENST00000622107 KIF27Q86VH2 1401 aa25.69■■□□□ 1.7
LTBP4-237ENST00000622107 SHROOM2Q13796 1616 aa25.59■■□□□ 1.69
LTBP4-237ENST00000622107 CUL7Q14999 1698 aa25.58■■□□□ 1.68
LTBP4-237ENST00000622107 IGF1RP08069 1367 aa25.57■■□□□ 1.68
LTBP4-237ENST00000622107 ERCC6L2Q5T890 1561 aa25.56■■□□□ 1.68
LTBP4-237ENST00000622107 RUSC2Q8N2Y8 1516 aa25.54■■□□□ 1.68
LTBP4-237ENST00000622107 PRG4Q92954 1404 aaPredicted RBP25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms