RNA–Protein interactions for RNA: ENST00000433861.6

BRPF1-205, Transcript of bromodomain and PHD finger containing 1, humanhuman

TSL 2 BASIC

Gene BRPF1, Length 4,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1-205ENST00000433861 NISCHQ9Y2I1 1504 aa26.28■■□□□ 1.8
BRPF1-205ENST00000433861 DCAF8L2P0C7V8 631 aa26.06■■□□□ 1.76
BRPF1-205ENST00000433861 SHROOM4Q9ULL8 1493 aa24.36■■□□□ 1.49
BRPF1-205ENST00000433861 SUPT5HO00267 1087 aaKnown RBP23.95■■□□□ 1.42
BRPF1-205ENST00000433861 ABCC9O60706 1549 aa23.4■■□□□ 1.34
BRPF1-205ENST00000433861 EHMT2Q96KQ7 1210 aa23.19■■□□□ 1.3
BRPF1-205ENST00000433861 PABPN1Q86U42 306 aaKnown RBP eCLIP23■■□□□ 1.27
BRPF1-205ENST00000433861 PCGF6Q9BYE7 350 aa22.82■■□□□ 1.24
BRPF1-205ENST00000433861 FAM9AQ8IZU1 332 aaPredicted RBP22.58■■□□□ 1.21
BRPF1-205ENST00000433861 PPARGC1BQ86YN6 1023 aaKnown RBP22.4■■□□□ 1.18
BRPF1-205ENST00000433861 RANGAP1P46060 587 aaPredicted RBP22.33■■□□□ 1.16
BRPF1-205ENST00000433861 HRCP23327 699 aa22.27■■□□□ 1.15
BRPF1-205ENST00000433861 TTBK1Q5TCY1 1321 aaPredicted RBP22.06■■□□□ 1.12
BRPF1-205ENST00000433861 TRIM41Q8WV44 630 aa21.98■■□□□ 1.11
BRPF1-205ENST00000433861 LOC105371045A0A1W2PR82 267 aa21.94■■□□□ 1.1
BRPF1-205ENST00000433861 SCRIBQ14160 1630 aa21.85■■□□□ 1.09
BRPF1-205ENST00000433861 CHIC1Q5VXU3 224 aa21.83■■□□□ 1.08
BRPF1-205ENST00000433861 ATP1B4Q9UN42 357 aaPredicted RBP21.74■■□□□ 1.07
BRPF1-205ENST00000433861 CCDC180Q9P1Z9 1646 aa21.73■■□□□ 1.07
BRPF1-205ENST00000433861 ZCCHC6Q5VYS8 1495 aaKnown RBP21.69■■□□□ 1.06
BRPF1-205ENST00000433861 UBTFP17480 764 aaKnown RBP21.63■■□□□ 1.05
BRPF1-205ENST00000433861 TRIM26Q12899 539 aaPredicted RBP21.5■■□□□ 1.03
BRPF1-205ENST00000433861 PELP1Q8IZL8 1130 aaKnown RBP21.48■■□□□ 1.03
BRPF1-205ENST00000433861 CCER1Q8TC90 406 aaPredicted RBP21.43■■□□□ 1.02
BRPF1-205ENST00000433861 YTHDC1Q96MU7 727 aaKnown RBP21.42■■□□□ 1.02
BRPF1-205ENST00000433861 APLP2Q06481 763 aa21.42■■□□□ 1.02
BRPF1-205ENST00000433861 RB1CC1Q8TDY2 1594 aa21.37■■□□□ 1.01
BRPF1-205ENST00000433861 ZEB1P37275 1124 aaPredicted RBP21.36■■□□□ 1.01
BRPF1-205ENST00000433861 FBLN2P98095 1184 aa21.36■■□□□ 1.01
BRPF1-205ENST00000433861 CENPBP07199 599 aaPredicted RBP21.23■□□□□ 0.99
BRPF1-205ENST00000433861 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.19■□□□□ 0.98
BRPF1-205ENST00000433861 HNRNPUL2Q1KMD3 747 aaKnown RBP21.19■□□□□ 0.98
BRPF1-205ENST00000433861 MYO15BQ96JP2 1530 aa21.15■□□□□ 0.98
BRPF1-205ENST00000433861 NACADO15069 1562 aa21.12■□□□□ 0.97
BRPF1-205ENST00000433861 CECR2Q9BXF3 1484 aa21.06■□□□□ 0.96
BRPF1-205ENST00000433861 SCAF1Q9H7N4 1312 aaKnown RBP21.01■□□□□ 0.95
BRPF1-205ENST00000433861 ARID3CA6NKF2 412 aa21.01■□□□□ 0.95
BRPF1-205ENST00000433861 GTF3C3Q9Y5Q9 886 aa20.99■□□□□ 0.95
BRPF1-205ENST00000433861 P3H3Q8IVL6 736 aa20.93■□□□□ 0.94
BRPF1-205ENST00000433861 ITGAEP38570 1179 aa20.92■□□□□ 0.94
BRPF1-205ENST00000433861 DIEXFQ68CQ4 756 aaKnown RBP20.88■□□□□ 0.93
BRPF1-205ENST00000433861 MYT1LQ9UL68 1186 aa20.85■□□□□ 0.93
BRPF1-205ENST00000433861 RSF1Q96T23 1441 aaPredicted RBP20.84■□□□□ 0.93
BRPF1-205ENST00000433861 NEUROD1Q13562 356 aa20.76■□□□□ 0.91
BRPF1-205ENST00000433861 ACIN1Q9UKV3 1341 aaKnown RBP20.74■□□□□ 0.91
BRPF1-205ENST00000433861 BAZ1BQ9UIG0 1483 aaKnown RBP20.68■□□□□ 0.9
BRPF1-205ENST00000433861 MYT1Q01538 1121 aa20.62■□□□□ 0.89
BRPF1-205ENST00000433861 DNAJC5BQ9UF47 199 aa20.6■□□□□ 0.89
BRPF1-205ENST00000433861 DCAF1Q9Y4B6 1507 aa20.6■□□□□ 0.89
BRPF1-205ENST00000433861 MROH2BQ7Z745 1585 aa20.59■□□□□ 0.89
BRPF1-205ENST00000433861 CSRNP3Q8WYN3 585 aa20.57■□□□□ 0.88
BRPF1-205ENST00000433861 ERCC6Q03468 1493 aa20.52■□□□□ 0.88
BRPF1-205ENST00000433861 CHMP7Q8WUX9 453 aaPredicted RBP20.46■□□□□ 0.87
BRPF1-205ENST00000433861 BAZ1AQ9NRL2 1556 aaPredicted RBP20.43■□□□□ 0.86
BRPF1-205ENST00000433861 BCANQ96GW7 911 aa20.37■□□□□ 0.85
BRPF1-205ENST00000433861 FAM50AQ14320 339 aaKnown RBP20.36■□□□□ 0.85
BRPF1-205ENST00000433861 PLPPR3Q6T4P5 718 aa20.29■□□□□ 0.84
BRPF1-205ENST00000433861 ZNF316A6NFI3 1004 aaPredicted RBP20.28■□□□□ 0.84
BRPF1-205ENST00000433861 ZNF777Q9ULD5 760 aaPredicted RBP20.28■□□□□ 0.84
BRPF1-205ENST00000433861 WIZO95785 1651 aa20.28■□□□□ 0.84
BRPF1-205ENST00000433861 ERICH6Q7L0X2 663 aa20.23■□□□□ 0.83
BRPF1-205ENST00000433861 CCDC88BA6NC98 1476 aa20.23■□□□□ 0.83
BRPF1-205ENST00000433861 ATAD2BQ9ULI0 1458 aa20.21■□□□□ 0.83
BRPF1-205ENST00000433861 WRNQ14191 1432 aaPredicted RBP eCLIP20.19■□□□□ 0.82
BRPF1-205ENST00000433861 TDRD9Q8NDG6 1382 aaKnown RBP20.17■□□□□ 0.82
BRPF1-205ENST00000433861 MIER1Q8N108 512 aa20.16■□□□□ 0.82
BRPF1-205ENST00000433861 NEFLP07196 543 aa20.15■□□□□ 0.82
BRPF1-205ENST00000433861 KCNH8Q96L42 1107 aa20.13■□□□□ 0.81
BRPF1-205ENST00000433861 CNGB1Q14028 1251 aaPredicted RBP20.12■□□□□ 0.81
BRPF1-205ENST00000433861 NPM1P06748 294 aaKnown RBP eCLIP20.08■□□□□ 0.8
BRPF1-205ENST00000433861 ABCC8Q09428 1581 aa20.07■□□□□ 0.8
BRPF1-205ENST00000433861 SMARCA2P51531 1590 aa20.05■□□□□ 0.8
BRPF1-205ENST00000433861 CADPSQ9ULU8 1353 aa20.04■□□□□ 0.8
BRPF1-205ENST00000433861 EIF4G1Q04637 1599 aaKnown RBP20.03■□□□□ 0.8
BRPF1-205ENST00000433861 TRIM52Q96A61 297 aa20.03■□□□□ 0.8
BRPF1-205ENST00000433861 POLR3GLQ9BT43 218 aa20.02■□□□□ 0.8
BRPF1-205ENST00000433861 SMARCA4P51532 1647 aa20■□□□□ 0.79
BRPF1-205ENST00000433861 SOGA1O94964 1423 aa20■□□□□ 0.79
BRPF1-205ENST00000433861 PDS5BQ9NTI5 1447 aa19.98■□□□□ 0.79
BRPF1-205ENST00000433861 NESP48681 1621 aa19.96■□□□□ 0.79
BRPF1-205ENST00000433861 CUX2O14529 1486 aa19.95■□□□□ 0.78
BRPF1-205ENST00000433861 SENP3Q9H4L4 574 aaPredicted RBP19.95■□□□□ 0.78
BRPF1-205ENST00000433861 CHIC2Q9UKJ5 165 aa19.93■□□□□ 0.78
BRPF1-205ENST00000433861 TRHP20396 242 aaPredicted RBP19.92■□□□□ 0.78
BRPF1-205ENST00000433861 CC2D2AQ9P2K1 1620 aa19.87■□□□□ 0.77
BRPF1-205ENST00000433861 BICRAQ9NZM4 1560 aa19.86■□□□□ 0.77
BRPF1-205ENST00000433861 KIF27Q86VH2 1401 aa19.86■□□□□ 0.77
BRPF1-205ENST00000433861 ZNF326Q5BKZ1 582 aaKnown RBP19.85■□□□□ 0.77
BRPF1-205ENST00000433861 CDK11AQ9UQ88 783 aaPredicted RBP19.82■□□□□ 0.76
BRPF1-205ENST00000433861 TOP2AP11388 1531 aaKnown RBP19.81■□□□□ 0.76
BRPF1-205ENST00000433861 FANCD2Q9BXW9 1451 aa19.8■□□□□ 0.76
BRPF1-205ENST00000433861 FKBP8Q14318 412 aa19.78■□□□□ 0.76
BRPF1-205ENST00000433861 CARMIL1Q5VZK9 1371 aa19.77■□□□□ 0.76
BRPF1-205ENST00000433861 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.76■□□□□ 0.752e-7■■□□□ 13.3
BRPF1-205ENST00000433861 CYB5RLQ6IPT4 315 aa19.75■□□□□ 0.75
BRPF1-205ENST00000433861 CEP164Q9UPV0 1460 aa19.74■□□□□ 0.75
BRPF1-205ENST00000433861 NCAPD3P42695 1498 aa19.73■□□□□ 0.75
BRPF1-205ENST00000433861 CLIP1P30622 1438 aa19.72■□□□□ 0.75
BRPF1-205ENST00000433861 SLC4A1APQ9BWU0 796 aaKnown RBP19.69■□□□□ 0.74
BRPF1-205ENST00000433861 RAD54L2Q9Y4B4 1467 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms