RNA–Protein interactions for RNA: ENST00000292123.9

SAFB-201, Transcript of scaffold attachment factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SAFB, Length 3,042 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB-201ENST00000292123 NISCHQ9Y2I1 1504 aa30.54■■■□□ 2.48
SAFB-201ENST00000292123 SHROOM4Q9ULL8 1493 aa26.31■■□□□ 1.8
SAFB-201ENST00000292123 SUPT5HO00267 1087 aaKnown RBP25.83■■□□□ 1.73
SAFB-201ENST00000292123 CCDC180Q9P1Z9 1646 aa25.82■■□□□ 1.72
SAFB-201ENST00000292123 ZCCHC6Q5VYS8 1495 aaKnown RBP25.82■■□□□ 1.72
SAFB-201ENST00000292123 DCAF8L2P0C7V8 631 aa25.58■■□□□ 1.69
SAFB-201ENST00000292123 CHIC1Q5VXU3 224 aa25.05■■□□□ 1.6
SAFB-201ENST00000292123 MYO15BQ96JP2 1530 aa24.97■■□□□ 1.59
SAFB-201ENST00000292123 DCAF1Q9Y4B6 1507 aa24.94■■□□□ 1.58
SAFB-201ENST00000292123 LOC105371045A0A1W2PR82 267 aa24.42■■□□□ 1.5
SAFB-201ENST00000292123 PCGF6Q9BYE7 350 aa24.41■■□□□ 1.5
SAFB-201ENST00000292123 SCRIBQ14160 1630 aa24.39■■□□□ 1.5
SAFB-201ENST00000292123 HRCP23327 699 aa24.35■■□□□ 1.49
SAFB-201ENST00000292123 ABCC9O60706 1549 aa24.35■■□□□ 1.49
SAFB-201ENST00000292123 RSF1Q96T23 1441 aaPredicted RBP24.25■■□□□ 1.47
SAFB-201ENST00000292123 RB1CC1Q8TDY2 1594 aa23.99■■□□□ 1.43
SAFB-201ENST00000292123 TRIM41Q8WV44 630 aa23.99■■□□□ 1.43
SAFB-201ENST00000292123 PPARGC1BQ86YN6 1023 aaKnown RBP23.98■■□□□ 1.43
SAFB-201ENST00000292123 CECR2Q9BXF3 1484 aa23.92■■□□□ 1.42
SAFB-201ENST00000292123 NACADO15069 1562 aa23.91■■□□□ 1.42
SAFB-201ENST00000292123 FAM9AQ8IZU1 332 aaPredicted RBP23.9■■□□□ 1.42
SAFB-201ENST00000292123 TRIM26Q12899 539 aaPredicted RBP23.84■■□□□ 1.41
SAFB-201ENST00000292123 MROH2BQ7Z745 1585 aa23.81■■□□□ 1.4
SAFB-201ENST00000292123 EHMT2Q96KQ7 1210 aa23.79■■□□□ 1.4
SAFB-201ENST00000292123 WIZO95785 1651 aa23.68■■□□□ 1.38
SAFB-201ENST00000292123 BAZ1AQ9NRL2 1556 aaPredicted RBP23.44■■□□□ 1.34
SAFB-201ENST00000292123 EIF4G1Q04637 1599 aaKnown RBP23.28■■□□□ 1.32
SAFB-201ENST00000292123 ZEB1P37275 1124 aaPredicted RBP23.26■■□□□ 1.31
SAFB-201ENST00000292123 SMARCA4P51532 1647 aa23.24■■□□□ 1.31
SAFB-201ENST00000292123 TOP2AP11388 1531 aaKnown RBP23.23■■□□□ 1.31
SAFB-201ENST00000292123 CCDC88BA6NC98 1476 aa23.22■■□□□ 1.31
SAFB-201ENST00000292123 ABCC8Q09428 1581 aa23.22■■□□□ 1.31
SAFB-201ENST00000292123 UNC13AQ9UPW8 1703 aa23.21■■□□□ 1.31
SAFB-201ENST00000292123 PABPN1Q86U42 306 aaKnown RBP eCLIP23.16■■□□□ 1.32e-11■□□□□ 8.5
SAFB-201ENST00000292123 SMARCA2P51531 1590 aa23.14■■□□□ 1.29
SAFB-201ENST00000292123 SOGA1O94964 1423 aa23.02■■□□□ 1.28
SAFB-201ENST00000292123 TTBK1Q5TCY1 1321 aaPredicted RBP23.01■■□□□ 1.27
SAFB-201ENST00000292123 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.98■■□□□ 1.27
SAFB-201ENST00000292123 BICRAQ9NZM4 1560 aa22.94■■□□□ 1.26
SAFB-201ENST00000292123 RUSC2Q8N2Y8 1516 aa22.93■■□□□ 1.26
SAFB-201ENST00000292123 CEP162Q5TB80 1403 aa22.9■■□□□ 1.26
SAFB-201ENST00000292123 CSRNP3Q8WYN3 585 aa22.89■■□□□ 1.25
SAFB-201ENST00000292123 CCER1Q8TC90 406 aaPredicted RBP22.88■■□□□ 1.25
SAFB-201ENST00000292123 UBTFP17480 764 aaKnown RBP22.87■■□□□ 1.25
SAFB-201ENST00000292123 TNIKQ9UKE5 1360 aa22.82■■□□□ 1.24
SAFB-201ENST00000292123 WRNQ14191 1432 aaPredicted RBP eCLIP22.8■■□□□ 1.24
SAFB-201ENST00000292123 EEA1Q15075 1411 aa22.76■■□□□ 1.23
SAFB-201ENST00000292123 PEG3Q9GZU2 1588 aa22.71■■□□□ 1.23
SAFB-201ENST00000292123 GOLGA3Q08378 1498 aa22.67■■□□□ 1.22
SAFB-201ENST00000292123 ATAD2BQ9ULI0 1458 aa22.66■■□□□ 1.22
SAFB-201ENST00000292123 SYNJ1O43426 1573 aa22.65■■□□□ 1.22
SAFB-201ENST00000292123 BAZ1BQ9UIG0 1483 aaKnown RBP22.61■■□□□ 1.21
SAFB-201ENST00000292123 CEP164Q9UPV0 1460 aa22.53■■□□□ 1.2
SAFB-201ENST00000292123 RANGAP1P46060 587 aaPredicted RBP22.52■■□□□ 1.2
SAFB-201ENST00000292123 SCAF1Q9H7N4 1312 aaKnown RBP22.52■■□□□ 1.2
SAFB-201ENST00000292123 CLIP1P30622 1438 aa22.46■■□□□ 1.19
SAFB-201ENST00000292123 KIF21BO75037 1637 aa22.45■■□□□ 1.18
SAFB-201ENST00000292123 DIEXFQ68CQ4 756 aaKnown RBP22.44■■□□□ 1.18
SAFB-201ENST00000292123 HNRNPUL2Q1KMD3 747 aaKnown RBP22.43■■□□□ 1.18
SAFB-201ENST00000292123 RAPGEF2Q9Y4G8 1499 aa22.43■■□□□ 1.18
SAFB-201ENST00000292123 VPS8Q8N3P4 1428 aa22.33■■□□□ 1.17
SAFB-201ENST00000292123 APLP2Q06481 763 aa22.32■■□□□ 1.16
SAFB-201ENST00000292123 TOP2BQ02880 1626 aa22.31■■□□□ 1.16
SAFB-201ENST00000292123 NEUROD1Q13562 356 aa22.28■■□□□ 1.16
SAFB-201ENST00000292123 ACIN1Q9UKV3 1341 aaKnown RBP22.25■■□□□ 1.15
SAFB-201ENST00000292123 ZNF316A6NFI3 1004 aaPredicted RBP22.23■■□□□ 1.15
SAFB-201ENST00000292123 BIVM-ERCC5R4GMW8 1640 aa22.2■■□□□ 1.14
SAFB-201ENST00000292123 NCAPD3P42695 1498 aa22.17■■□□□ 1.14
SAFB-201ENST00000292123 CUX1P39880 1505 aa22.14■■□□□ 1.13
SAFB-201ENST00000292123 PRXQ9BXM0 1461 aa22.14■■□□□ 1.13
SAFB-201ENST00000292123 HMGXB3Q12766 1538 aa22.12■■□□□ 1.13
SAFB-201ENST00000292123 CENPBP07199 599 aaPredicted RBP22.09■■□□□ 1.13
SAFB-201ENST00000292123 KANK4Q5T7N3 995 aaPredicted RBP22.08■■□□□ 1.12
SAFB-201ENST00000292123 ERICH3Q5RHP9 1530 aa22.07■■□□□ 1.12
SAFB-201ENST00000292123 ARAP1Q96P48 1450 aa22.07■■□□□ 1.12
SAFB-201ENST00000292123 GTF3C3Q9Y5Q9 886 aa22.05■■□□□ 1.12
SAFB-201ENST00000292123 KIF27Q86VH2 1401 aa22.04■■□□□ 1.12
SAFB-201ENST00000292123 CFTRP13569 1480 aa22.03■■□□□ 1.12
SAFB-201ENST00000292123 YTHDC1Q96MU7 727 aaKnown RBP22■■□□□ 1.11
SAFB-201ENST00000292123 MIER1Q8N108 512 aa21.98■■□□□ 1.11
SAFB-201ENST00000292123 PELP1Q8IZL8 1130 aaKnown RBP21.91■■□□□ 1.1
SAFB-201ENST00000292123 ARHGAP35Q9NRY4 1499 aa21.88■■□□□ 1.09
SAFB-201ENST00000292123 DHX57Q6P158 1386 aaKnown RBP21.88■■□□□ 1.09
SAFB-201ENST00000292123 CUX2O14529 1486 aa21.86■■□□□ 1.09
SAFB-201ENST00000292123 ITGAEP38570 1179 aa21.85■■□□□ 1.09
SAFB-201ENST00000292123 IGF1RP08069 1367 aa21.84■■□□□ 1.09
SAFB-201ENST00000292123 CADPSQ9ULU8 1353 aa21.8■■□□□ 1.08
SAFB-201ENST00000292123 RRBP1Q9P2E9 1410 aaKnown RBP21.8■■□□□ 1.08
SAFB-201ENST00000292123 CLSPNQ9HAW4 1339 aa21.77■■□□□ 1.08
SAFB-201ENST00000292123 CCNB3Q8WWL7 1395 aa21.77■■□□□ 1.07
SAFB-201ENST00000292123 CARMIL1Q5VZK9 1371 aa21.75■■□□□ 1.07
SAFB-201ENST00000292123 FGD5Q6ZNL6 1462 aa21.74■■□□□ 1.07
SAFB-201ENST00000292123 PRDM2Q13029 1718 aa21.74■■□□□ 1.07
SAFB-201ENST00000292123 P3H3Q8IVL6 736 aa21.71■■□□□ 1.07
SAFB-201ENST00000292123 ATP1B4Q9UN42 357 aaPredicted RBP21.65■■□□□ 1.06
SAFB-201ENST00000292123 CC2D2AQ9P2K1 1620 aa21.62■■□□□ 1.05
SAFB-201ENST00000292123 TIAM1Q13009 1591 aa21.61■■□□□ 1.05
SAFB-201ENST00000292123 FANCD2Q9BXW9 1451 aa21.6■■□□□ 1.05
SAFB-201ENST00000292123 RAB3GAP2Q9H2M9 1393 aa21.6■■□□□ 1.05
SAFB-201ENST00000292123 RAD54L2Q9Y4B4 1467 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms