RNA–Protein interactions for RNA: ENST00000473420.5

CTDSP1-207, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-207ENST00000473420 NISCHQ9Y2I1 1504 aa45.58■■■■■ 4.89
CTDSP1-207ENST00000473420 CCDC180Q9P1Z9 1646 aa40.48■■■■■ 4.07
CTDSP1-207ENST00000473420 ABCC9O60706 1549 aa39.05■■■■□ 3.84
CTDSP1-207ENST00000473420 ZCCHC6Q5VYS8 1495 aaKnown RBP38.08■■■■□ 3.69
CTDSP1-207ENST00000473420 NACADO15069 1562 aa37.9■■■■□ 3.66
CTDSP1-207ENST00000473420 RB1CC1Q8TDY2 1594 aa37.85■■■■□ 3.65
CTDSP1-207ENST00000473420 MYO15BQ96JP2 1530 aa37.85■■■■□ 3.65
CTDSP1-207ENST00000473420 DCAF1Q9Y4B6 1507 aa37.82■■■■□ 3.64
CTDSP1-207ENST00000473420 DCAF8L2P0C7V8 631 aa37.74■■■■□ 3.63
CTDSP1-207ENST00000473420 UNC13AQ9UPW8 1703 aa37.05■■■■□ 3.52
CTDSP1-207ENST00000473420 SCRIBQ14160 1630 aa36.84■■■■□ 3.49
CTDSP1-207ENST00000473420 BICRAQ9NZM4 1560 aa36.66■■■■□ 3.46
CTDSP1-207ENST00000473420 PABPN1Q86U42 306 aaKnown RBP eCLIP36.48■■■■□ 3.43
CTDSP1-207ENST00000473420 SHROOM4Q9ULL8 1493 aa36.41■■■■□ 3.42
CTDSP1-207ENST00000473420 EIF4G1Q04637 1599 aaKnown RBP35.66■■■■□ 3.3
CTDSP1-207ENST00000473420 DNAJC5BQ9UF47 199 aa35.42■■■■□ 3.26
CTDSP1-207ENST00000473420 CC2D2AQ9P2K1 1620 aa35.42■■■■□ 3.26
CTDSP1-207ENST00000473420 CECR2Q9BXF3 1484 aa35.41■■■■□ 3.26
CTDSP1-207ENST00000473420 BAZ1AQ9NRL2 1556 aaPredicted RBP35.34■■■■□ 3.25
CTDSP1-207ENST00000473420 SMARCA4P51532 1647 aa35.32■■■■□ 3.25
CTDSP1-207ENST00000473420 MROH2BQ7Z745 1585 aa35.11■■■■□ 3.21
CTDSP1-207ENST00000473420 SMARCA2P51531 1590 aa35.01■■■■□ 3.2
CTDSP1-207ENST00000473420 PEG3Q9GZU2 1588 aa35.01■■■■□ 3.2
CTDSP1-207ENST00000473420 ATAD2BQ9ULI0 1458 aa34.98■■■■□ 3.19
CTDSP1-207ENST00000473420 NCAPD3P42695 1498 aa34.92■■■■□ 3.18
CTDSP1-207ENST00000473420 HMGXB3Q12766 1538 aa34.85■■■■□ 3.17
CTDSP1-207ENST00000473420 RSF1Q96T23 1441 aaPredicted RBP34.82■■■■□ 3.17
CTDSP1-207ENST00000473420 WIZO95785 1651 aa34.78■■■■□ 3.16
CTDSP1-207ENST00000473420 BAZ1BQ9UIG0 1483 aaKnown RBP34.72■■■■□ 3.15
CTDSP1-207ENST00000473420 TOP2AP11388 1531 aaKnown RBP34.46■■■■□ 3.11
CTDSP1-207ENST00000473420 SUPT5HO00267 1087 aaKnown RBP34.11■■■■□ 3.05
CTDSP1-207ENST00000473420 LAMC3Q9Y6N6 1575 aa34■■■■□ 3.03
CTDSP1-207ENST00000473420 CCDC88BA6NC98 1476 aa33.99■■■■□ 3.03
CTDSP1-207ENST00000473420 NESP48681 1621 aa33.91■■■■□ 3.02
CTDSP1-207ENST00000473420 CADPSQ9ULU8 1353 aa33.89■■■■□ 3.02
CTDSP1-207ENST00000473420 CFTRP13569 1480 aa33.81■■■■□ 3
CTDSP1-207ENST00000473420 PRDM2Q13029 1718 aa33.73■■■□□ 2.99
CTDSP1-207ENST00000473420 PDS5BQ9NTI5 1447 aa33.69■■■□□ 2.98
CTDSP1-207ENST00000473420 ERCC6Q03468 1493 aa33.65■■■□□ 2.98
CTDSP1-207ENST00000473420 KIF21AQ7Z4S6 1674 aa33.63■■■□□ 2.97
CTDSP1-207ENST00000473420 FANCD2Q9BXW9 1451 aa33.52■■■□□ 2.96
CTDSP1-207ENST00000473420 CEP164Q9UPV0 1460 aa33.46■■■□□ 2.95
CTDSP1-207ENST00000473420 THOC2Q8NI27 1593 aaKnown RBP33.42■■■□□ 2.94
CTDSP1-207ENST00000473420 MRC2Q9UBG0 1479 aa33.33■■■□□ 2.93
CTDSP1-207ENST00000473420 WDR62O43379 1518 aa33.24■■■□□ 2.91
CTDSP1-207ENST00000473420 CUX2O14529 1486 aa33.24■■■□□ 2.91
CTDSP1-207ENST00000473420 URB2Q14146 1524 aaKnown RBP33.17■■■□□ 2.9
CTDSP1-207ENST00000473420 ABCC8Q09428 1581 aa33.1■■■□□ 2.89
CTDSP1-207ENST00000473420 DNMBPQ6XZF7 1577 aa33.08■■■□□ 2.89
CTDSP1-207ENST00000473420 TOPBP1Q92547 1522 aa33.04■■■□□ 2.88
CTDSP1-207ENST00000473420 CUX1P39880 1505 aa32.92■■■□□ 2.86
CTDSP1-207ENST00000473420 WRNQ14191 1432 aaPredicted RBP eCLIP32.85■■■□□ 2.85
CTDSP1-207ENST00000473420 BIVM-ERCC5R4GMW8 1640 aa32.82■■■□□ 2.84
CTDSP1-207ENST00000473420 TOP2BQ02880 1626 aa32.8■■■□□ 2.84
CTDSP1-207ENST00000473420 POLA1P09884 1462 aaPredicted RBP32.78■■■□□ 2.84
CTDSP1-207ENST00000473420 SYNJ1O43426 1573 aa32.77■■■□□ 2.84
CTDSP1-207ENST00000473420 IFT140Q96RY7 1462 aa32.75■■■□□ 2.83
CTDSP1-207ENST00000473420 FGD5Q6ZNL6 1462 aa32.74■■■□□ 2.83
CTDSP1-207ENST00000473420 TARBP1Q13395 1621 aaKnown RBP32.69■■■□□ 2.82
CTDSP1-207ENST00000473420 SOGA1O94964 1423 aa32.61■■■□□ 2.81
CTDSP1-207ENST00000473420 RAD54L2Q9Y4B4 1467 aa32.58■■■□□ 2.81
CTDSP1-207ENST00000473420 WDR97A6NE52 1622 aa32.57■■■□□ 2.8
CTDSP1-207ENST00000473420 ZNF608Q9ULD9 1512 aaPredicted RBP32.51■■■□□ 2.79
CTDSP1-207ENST00000473420 EIF4G3O43432 1585 aaKnown RBP32.49■■■□□ 2.79
CTDSP1-207ENST00000473420 ABCA10Q8WWZ4 1543 aa32.48■■■□□ 2.79
CTDSP1-207ENST00000473420 AQRO60306 1485 aaKnown RBP eCLIP32.36■■■□□ 2.776e-12■■■■■ 82.1
CTDSP1-207ENST00000473420 ABCA5Q8WWZ7 1642 aa32.36■■■□□ 2.77
CTDSP1-207ENST00000473420 TDRD9Q8NDG6 1382 aaKnown RBP32.34■■■□□ 2.77
CTDSP1-207ENST00000473420 PBRM1Q86U86 1689 aa32.27■■■□□ 2.76
CTDSP1-207ENST00000473420 GAPVD1Q14C86 1478 aa32.27■■■□□ 2.76
CTDSP1-207ENST00000473420 TRIM41Q8WV44 630 aa32.25■■■□□ 2.75
CTDSP1-207ENST00000473420 GRIN2BQ13224 1484 aa32.23■■■□□ 2.75
CTDSP1-207ENST00000473420 ERICH3Q5RHP9 1530 aa32.13■■■□□ 2.73
CTDSP1-207ENST00000473420 KIF27Q86VH2 1401 aa32.13■■■□□ 2.73
CTDSP1-207ENST00000473420 MAGI1Q96QZ7 1491 aaPredicted RBP32.13■■■□□ 2.73
CTDSP1-207ENST00000473420 SNAPC4Q5SXM2 1469 aa32.11■■■□□ 2.73
CTDSP1-207ENST00000473420 CHIC1Q5VXU3 224 aa32.11■■■□□ 2.73
CTDSP1-207ENST00000473420 CHD1O14646 1710 aa32.02■■■□□ 2.72
CTDSP1-207ENST00000473420 ADAMTS12P58397 1594 aa32■■■□□ 2.71
CTDSP1-207ENST00000473420 SYNJ2O15056 1496 aa31.98■■■□□ 2.71
CTDSP1-207ENST00000473420 CUL7Q14999 1698 aa31.95■■■□□ 2.7
CTDSP1-207ENST00000473420 FHAD1B1AJZ9 1412 aa31.92■■■□□ 2.7
CTDSP1-207ENST00000473420 IGF1RP08069 1367 aa31.92■■■□□ 2.7
CTDSP1-207ENST00000473420 RUSC2Q8N2Y8 1516 aa31.9■■■□□ 2.7
CTDSP1-207ENST00000473420 CHMP7Q8WUX9 453 aaPredicted RBP31.85■■■□□ 2.69
CTDSP1-207ENST00000473420 FBLN2P98095 1184 aa31.83■■■□□ 2.69
CTDSP1-207ENST00000473420 OSCARQ8IYS5 282 aa31.82■■■□□ 2.68
CTDSP1-207ENST00000473420 GRIN2AQ12879 1464 aa31.82■■■□□ 2.68
CTDSP1-207ENST00000473420 EEA1Q15075 1411 aa31.82■■■□□ 2.68
CTDSP1-207ENST00000473420 CARMIL1Q5VZK9 1371 aa31.74■■■□□ 2.67
CTDSP1-207ENST00000473420 NUP160Q12769 1436 aa31.66■■■□□ 2.66
CTDSP1-207ENST00000473420 CLASP1Q7Z460 1538 aa31.66■■■□□ 2.66
CTDSP1-207ENST00000473420 DNAJC5Q9H3Z4 198 aa31.66■■■□□ 2.66
CTDSP1-207ENST00000473420 CEP170Q5SW79 1584 aa31.65■■■□□ 2.66
CTDSP1-207ENST00000473420 RAPGEF2Q9Y4G8 1499 aa31.64■■■□□ 2.66
CTDSP1-207ENST00000473420 CSRNP3Q8WYN3 585 aa31.62■■■□□ 2.65
CTDSP1-207ENST00000473420 PRXQ9BXM0 1461 aa31.62■■■□□ 2.65
CTDSP1-207ENST00000473420 FAM9AQ8IZU1 332 aaPredicted RBP31.5■■■□□ 2.63
CTDSP1-207ENST00000473420 KIF21BO75037 1637 aa31.49■■■□□ 2.63
CTDSP1-207ENST00000473420 KIAA0586Q9BVV6 1533 aa31.45■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms